RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 ZSWIM1Q9BR11 485 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 LXNQ9BS40 222 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 NFKBIZQ9BYH8 718 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 VPS45Q9NRW7 570 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 CABIN1Q9Y6J0 2220 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 KIAA1217Q5T5P2 1943 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 CTDNEP1O95476 244 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 GYG1P46976 350 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 MDM2Q00987 491 aaPredicted RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 COG2Q14746 738 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 KMT5BQ4FZB7 885 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 INTS5Q6P9B9 1019 aaKnown RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 SYT2Q8N9I0 419 aaPredicted RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 SERPINI1Q99574 410 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 ZNF577Q9BSK1 485 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 PIM2Q9P1W9 311 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 FAM8A1Q9UBU6 413 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 PCDHA6Q9UN73 950 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 PCDHA8Q9Y5H6 950 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 URB1O60287 2271 aaKnown RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 PPP1R3GB7ZBB8 358 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 MAP2K7O14733 419 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 BACH1O14867 736 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 BRD2P25440 801 aaKnown RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 RAB15P59190 212 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 PDE1BQ01064 536 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 MAPK7Q13164 816 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 GLYCTKQ8IVS8 523 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 AGGF1Q8N302 714 aaeCLIP4□□□□□ -1.77
SHPRH-205ENST00000433355 KLHDC4Q8TBB5 520 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 PSPC1Q8WXF1 523 aaKnown RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 HAUS8Q9BT25 410 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 TCHPQ9BT92 498 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 FAM207AQ9NSI2 230 aaPredicted RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 DNAJC17Q9NVM6 304 aaKnown RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 PCDHB6Q9Y5E3 794 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 SPDYE2BA6NHP3 402 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 E7EVH7 732 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 KCNQ3O43525 872 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 TRAPPC3O43617 180 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 SORBS3O60504 671 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 STAU1O95793 577 aaKnown RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 GLI1P08151 1106 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 SPDYE6P0CI01 402 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 PCSK1P29120 753 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 LIG4P49917 911 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 PTENP60484 403 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 KIF22Q14807 665 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 QRICH1Q2TAL8 776 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 GPD1LQ8N335 351 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 NCLNQ969V3 563 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 MRPL4Q9BYD3 311 aaKnown RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 EPN3Q9H201 632 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 CREBBPQ92793 2442 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 USP17L10C9JJH3 530 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 PHF2O75151 1096 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 CD4P01730 458 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 GARSP41250 739 aaKnown RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 CDK7P50613 346 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 MTMR1Q13613 665 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 PRR16Q569H4 304 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 SULF1Q8IWU6 871 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 SPATA4Q8NEY3 305 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 STMN2Q93045 179 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 ASB2Q96Q27 587 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 SLC9A7Q96T83 725 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 EPS15L1Q9UBC2 864 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 AMACRQ9UHK6 382 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 ITGA11Q9UKX5 1188 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 PPP1R9AQ9ULJ8 1098 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 CNTNAP2Q9UHC6 1331 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 TTC26A0AVF1 554 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 CCDC22O60826 627 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 EIF4A3P38919 411 aaKnown RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 NFIXQ14938 502 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 STXBP2Q15833 593 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 ERFEQ4G0M1 354 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 AARS2Q5JTZ9 985 aaKnown RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 CEP85LQ5SZL2 805 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 DNAJC24Q6P3W2 148 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 MAP4K3Q8IVH8 894 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 ATXN2LQ8WWM7 1075 aaKnown RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 EIF2B3Q9NR50 452 aaKnown RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 PARVAQ9NVD7 372 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 NAGPAQ9UK23 515 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 ATF5Q9Y2D1 282 aaPredicted RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 ZBTB12Q9Y330 459 aaPredicted RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 PCDHA13Q9Y5I0 950 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 ST14Q9Y5Y6 855 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 GRK2P25098 689 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 OAS2P29728 719 aaKnown RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 COPAP53621 1224 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 TXNRD1Q16881 649 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 TTC31Q49AM3 519 aaPredicted RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 ZCWPW2Q504Y3 356 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 ZNF394Q53GI3 561 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 CIAPIN1Q6FI81 312 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 MICAL1Q8TDZ2 1067 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 LZICQ8WZA0 190 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 ANKRD36BP1Q96IX9 119 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms