RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 OSBPL3Q9H4L5 887 aa17.64■□□□□ 0.41
NUP50-209ENST00000432340 IGF2RP11717 2491 aa17.63■□□□□ 0.41
NUP50-209ENST00000432340 CCDC163A0A0D9SF12 145 aa17.63■□□□□ 0.41
NUP50-209ENST00000432340 SHISA7A6NL88 538 aa17.63■□□□□ 0.41
NUP50-209ENST00000432340 EIF4E1BA6NMX2 242 aaKnown RBP17.63■□□□□ 0.41
NUP50-209ENST00000432340 ZNF197O14709 1029 aa17.63■□□□□ 0.41
NUP50-209ENST00000432340 MAFO75444 373 aaPredicted RBP17.63■□□□□ 0.41
NUP50-209ENST00000432340 RPP40O75818 363 aaKnown RBP17.63■□□□□ 0.41
NUP50-209ENST00000432340 AKAP3O75969 853 aa17.63■□□□□ 0.41
NUP50-209ENST00000432340 SCNN1GP51170 649 aa17.63■□□□□ 0.41
NUP50-209ENST00000432340 ANTXR2P58335 489 aa17.63■□□□□ 0.41
NUP50-209ENST00000432340 TANGO2Q6ICL3 276 aa17.63■□□□□ 0.41
NUP50-209ENST00000432340 MB21D2Q8IYB1 491 aaPredicted RBP17.63■□□□□ 0.41
NUP50-209ENST00000432340 SYNPOQ8N3V7 929 aa17.63■□□□□ 0.41
NUP50-209ENST00000432340 GAB3Q8WWW8 586 aa17.63■□□□□ 0.41
NUP50-209ENST00000432340 SLC7A3Q8WY07 619 aa17.63■□□□□ 0.41
NUP50-209ENST00000432340 TRIM6Q9C030 488 aaPredicted RBP17.63■□□□□ 0.41
NUP50-209ENST00000432340 IFT122Q9HBG6 1241 aa17.63■□□□□ 0.41
NUP50-209ENST00000432340 ZNF334Q9HCZ1 680 aaPredicted RBP17.63■□□□□ 0.41
NUP50-209ENST00000432340 RBM28Q9NW13 759 aaKnown RBP17.63■□□□□ 0.41
NUP50-209ENST00000432340 DNMT3BQ9UBC3 853 aaKnown RBP17.63■□□□□ 0.41
NUP50-209ENST00000432340 IPPQ9Y573 584 aa17.63■□□□□ 0.41
NUP50-209ENST00000432340 COL4A3BPQ9Y5P4 624 aa17.63■□□□□ 0.41
NUP50-209ENST00000432340 FLNBO75369 2602 aaKnown RBP17.62■□□□□ 0.41
NUP50-209ENST00000432340 K7ESF4 209 aa17.62■□□□□ 0.41
NUP50-209ENST00000432340 ZNF263O14978 683 aa17.62■□□□□ 0.41
NUP50-209ENST00000432340 GAS7O60861 476 aa17.62■□□□□ 0.41
NUP50-209ENST00000432340 MICAL2O94851 1124 aa17.62■□□□□ 0.41
NUP50-209ENST00000432340 MCM5P33992 734 aa17.62■□□□□ 0.41
NUP50-209ENST00000432340 MPLP40238 635 aa17.62■□□□□ 0.41
NUP50-209ENST00000432340 LIFRP42702 1097 aa17.62■□□□□ 0.41
NUP50-209ENST00000432340 RAP1GAPP47736 663 aa17.62■□□□□ 0.41
NUP50-209ENST00000432340 CLK2P49760 499 aaKnown RBP17.62■□□□□ 0.41
NUP50-209ENST00000432340 GRIK3Q13003 919 aa17.62■□□□□ 0.41
NUP50-209ENST00000432340 HDAC1Q13547 482 aaPredicted RBP17.62■□□□□ 0.41
NUP50-209ENST00000432340 PLA2G2CQ5R387 149 aa17.62■□□□□ 0.41
NUP50-209ENST00000432340 NOTUMQ6P988 496 aa17.62■□□□□ 0.41
NUP50-209ENST00000432340 PRSS55Q6UWB4 352 aaPredicted RBP17.62■□□□□ 0.41
NUP50-209ENST00000432340 CSGALNACT1Q8TDX6 532 aa17.62■□□□□ 0.41
NUP50-209ENST00000432340 CLSTN3Q9BQT9 956 aa17.62■□□□□ 0.41
NUP50-209ENST00000432340 SCNM1Q9BWG6 230 aa17.62■□□□□ 0.41
NUP50-209ENST00000432340 PLA2G2FQ9BZM2 168 aa17.62■□□□□ 0.41
NUP50-209ENST00000432340 C8orf33Q9H7E9 229 aaPredicted RBP17.62■□□□□ 0.41
NUP50-209ENST00000432340 ZMYM2Q9UBW7 1377 aa17.62■□□□□ 0.41
NUP50-209ENST00000432340 EVPLQ92817 2033 aa17.61■□□□□ 0.41
NUP50-209ENST00000432340 RHOP08100 348 aa17.61■□□□□ 0.41
NUP50-209ENST00000432340 CCDC192P0DO97 292 aa17.61■□□□□ 0.41
NUP50-209ENST00000432340 CSRP1P21291 193 aaKnown RBP17.61■□□□□ 0.41
NUP50-209ENST00000432340 GDI1P31150 447 aa17.61■□□□□ 0.41
NUP50-209ENST00000432340 HOXA11P31270 313 aaPredicted RBP17.61■□□□□ 0.41
NUP50-209ENST00000432340 RDXP35241 583 aaKnown RBP17.61■□□□□ 0.41
NUP50-209ENST00000432340 RAB33AQ14088 237 aa17.61■□□□□ 0.41
NUP50-209ENST00000432340 HSP90AA2PQ14568 343 aaPredicted RBP17.61■□□□□ 0.41
NUP50-209ENST00000432340 RTP2Q5QGT7 225 aa17.61■□□□□ 0.41
NUP50-209ENST00000432340 UBXN11Q5T124 520 aa17.61■□□□□ 0.41
NUP50-209ENST00000432340 CEP57Q86XR8 500 aa17.61■□□□□ 0.41
NUP50-209ENST00000432340 MAP4K3Q8IVH8 894 aa17.61■□□□□ 0.41
NUP50-209ENST00000432340 PSPC1Q8WXF1 523 aaKnown RBP17.61■□□□□ 0.41
NUP50-209ENST00000432340 E2F7Q96AV8 911 aa17.61■□□□□ 0.41
NUP50-209ENST00000432340 EDEM2Q9BV94 578 aa17.61■□□□□ 0.41
NUP50-209ENST00000432340 BARHL2Q9NY43 387 aa17.61■□□□□ 0.41
NUP50-209ENST00000432340 WASF3Q9UPY6 502 aa17.61■□□□□ 0.41
NUP50-209ENST00000432340 NEUROG3Q9Y4Z2 214 aa17.61■□□□□ 0.41
NUP50-209ENST00000432340 PPME1Q9Y570 386 aa17.61■□□□□ 0.41
NUP50-209ENST00000432340 F5P12259 2224 aa17.6■□□□□ 0.41
NUP50-209ENST00000432340 PRC1O43663 620 aa17.6■□□□□ 0.41
NUP50-209ENST00000432340 PTPN2P17706 415 aa17.6■□□□□ 0.41
NUP50-209ENST00000432340 RXRAP19793 462 aa17.6■□□□□ 0.41
NUP50-209ENST00000432340 CCNE1P24864 410 aa17.6■□□□□ 0.41
NUP50-209ENST00000432340 SPIRE1Q08AE8 756 aa17.6■□□□□ 0.41
NUP50-209ENST00000432340 GRM2Q14416 872 aa17.6■□□□□ 0.41
NUP50-209ENST00000432340 SH3PXD2AQ5TCZ1 1133 aa17.6■□□□□ 0.41
NUP50-209ENST00000432340 FAM171A1Q5VUB5 890 aa17.6■□□□□ 0.41
NUP50-209ENST00000432340 JAKMIP3Q5VZ66 844 aa17.6■□□□□ 0.41
NUP50-209ENST00000432340 SMG8Q8ND04 991 aaKnown RBP17.6■□□□□ 0.41
NUP50-209ENST00000432340 LNX1Q8TBB1 728 aaPredicted RBP17.6■□□□□ 0.41
NUP50-209ENST00000432340 CCDC12Q8WUD4 166 aaPredicted RBP17.6■□□□□ 0.41
NUP50-209ENST00000432340 CRYGNQ8WXF5 182 aa17.6■□□□□ 0.41
NUP50-209ENST00000432340 TEKT3Q9BXF9 490 aa17.6■□□□□ 0.41
NUP50-209ENST00000432340 HCFC1R1Q9NWW0 138 aa17.6■□□□□ 0.41
NUP50-209ENST00000432340 F8W810 466 aa17.59■□□□□ 0.41
NUP50-209ENST00000432340 ASAP2O43150 1006 aa17.59■□□□□ 0.41
NUP50-209ENST00000432340 CHMP2AO43633 222 aa17.59■□□□□ 0.41
NUP50-209ENST00000432340 LRG1P02750 347 aa17.59■□□□□ 0.41
NUP50-209ENST00000432340 CIITAP33076 1130 aa17.59■□□□□ 0.41
NUP50-209ENST00000432340 ELF2Q15723 593 aa17.59■□□□□ 0.41
NUP50-209ENST00000432340 CCDC6Q16204 474 aa17.59■□□□□ 0.41
NUP50-209ENST00000432340 TYW1BQ6NUM6 668 aa17.59■□□□□ 0.41
NUP50-209ENST00000432340 KSR1Q8IVT5 923 aa17.59■□□□□ 0.41
NUP50-209ENST00000432340 YAF2Q8IY57 180 aa17.59■□□□□ 0.41
NUP50-209ENST00000432340 SMARCD2Q92925 531 aa17.59■□□□□ 0.41
NUP50-209ENST00000432340 ZFP42Q96MM3 310 aa17.59■□□□□ 0.41
NUP50-209ENST00000432340 C4orf47A7E2U8 309 aa17.58■□□□□ 0.4
NUP50-209ENST00000432340 DDX11L8A8MPP1 907 aa17.58■□□□□ 0.4
NUP50-209ENST00000432340 SH2B2O14492 632 aaPredicted RBP17.58■□□□□ 0.4
NUP50-209ENST00000432340 DKC1O60832 514 aaKnown RBP eCLIP17.58■□□□□ 0.4
NUP50-209ENST00000432340 SRGAP2CP0DJJ0 459 aa17.58■□□□□ 0.4
NUP50-209ENST00000432340 SPINK2P20155 84 aa17.58■□□□□ 0.4
NUP50-209ENST00000432340 ELF1P32519 619 aa17.58■□□□□ 0.4
NUP50-209ENST00000432340 KPNA1P52294 538 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms