RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 HELQQ8TDG4 1101 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 DHX38Q92620 1227 aaKnown RBP18.01■□□□□ 0.47
USHBP1-203ENST00000431146 TCHPQ9BT92 498 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 GOLPH3Q9H4A6 298 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 KIAA1586Q9HCI6 787 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 TAS2R14Q9NYV8 317 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 DNAH12Q6ZR08 3092 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 CTAGE15A4D2H0 777 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 CLDN3O15551 220 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 GAS2O43903 313 aaKnown RBP18.01■□□□□ 0.47
USHBP1-203ENST00000431146 CSDE1O75534 798 aaKnown RBP18.01■□□□□ 0.47
USHBP1-203ENST00000431146 SGPL1O95470 568 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 C22orf31O95567 290 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 CTAGE8P0CG41 777 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 GTF2H1P32780 548 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 EFNA5P52803 228 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 ACVR2BQ13705 512 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 PTPROQ16827 1216 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 C10orf76Q5T2E6 689 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 CHADLQ6NUI6 762 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 CTAGE6Q86UF2 777 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 ZBTB8OSQ8IWT0 167 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 CTAGE4Q8IX94 777 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 NOA1Q8NC60 698 aaKnown RBP18.01■□□□□ 0.47
USHBP1-203ENST00000431146 COG1Q8WTW3 980 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 NT5C1BQ96P26 610 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 SNX12Q9UMY4 172 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 PACSIN2Q9UNF0 486 aaPredicted RBP18.01■□□□□ 0.47
USHBP1-203ENST00000431146 CYP26A1O43174 497 aa18■□□□□ 0.47
USHBP1-203ENST00000431146 B4GALT5O43286 388 aa18■□□□□ 0.47
USHBP1-203ENST00000431146 CCDC172P0C7W6 258 aa18■□□□□ 0.47
USHBP1-203ENST00000431146 CHRM1P11229 460 aaPredicted RBP18■□□□□ 0.47
USHBP1-203ENST00000431146 TNFAIP3P21580 790 aa18■□□□□ 0.47
USHBP1-203ENST00000431146 SCP2P22307 547 aa18■□□□□ 0.47
USHBP1-203ENST00000431146 NOP2P46087 812 aaKnown RBP18■□□□□ 0.47
USHBP1-203ENST00000431146 PRPF4BQ13523 1007 aaKnown RBP18■□□□□ 0.47
USHBP1-203ENST00000431146 TAF1CQ15572 869 aaPredicted RBP18■□□□□ 0.47
USHBP1-203ENST00000431146 MAPK6Q16659 721 aa18■□□□□ 0.47
USHBP1-203ENST00000431146 TAF3Q5VWG9 929 aa18■□□□□ 0.47
USHBP1-203ENST00000431146 TDRD10Q5VZ19 366 aaKnown RBP18■□□□□ 0.47
USHBP1-203ENST00000431146 SCARA3Q6AZY7 606 aa18■□□□□ 0.47
USHBP1-203ENST00000431146 PPP1R13LQ8WUF5 828 aa18■□□□□ 0.47
USHBP1-203ENST00000431146 ACO2Q99798 780 aaKnown RBP18■□□□□ 0.47
USHBP1-203ENST00000431146 TLR10Q9BXR5 811 aa18■□□□□ 0.47
USHBP1-203ENST00000431146 MRPL4Q9BYD3 311 aaKnown RBP18■□□□□ 0.47
USHBP1-203ENST00000431146 MINDY3Q9H8M7 445 aa18■□□□□ 0.47
USHBP1-203ENST00000431146 DAAM1Q9Y4D1 1078 aa18■□□□□ 0.47
USHBP1-203ENST00000431146 GRID2IPA4D2P6 1211 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 INO80B-WBP1J3KQ70 363 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 PDE2AO00408 941 aaPredicted RBP17.99■□□□□ 0.47
USHBP1-203ENST00000431146 H2AFZP0C0S5 128 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 ABCB4P21439 1286 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 ANXA13P27216 316 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 GALCP54803 685 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 MFAP3P55082 362 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 BIRC3Q13489 604 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 C15orf39Q6ZRI6 1047 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 H2AFVQ71UI9 128 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 AGPAT1Q99943 283 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 C16orf70Q9BSU1 422 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 INO80BQ9C086 356 aaPredicted RBP17.99■□□□□ 0.47
USHBP1-203ENST00000431146 EHD2Q9NZN4 543 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 KAT6AQ92794 2004 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 CALCAP01258 141 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 SPOPLQ6IQ16 392 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 SLC47A2Q86VL8 602 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 EXOC8Q8IYI6 725 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 OR6J1Q8NGC5 347 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 CAGE1Q8TC20 777 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 RABGGTAQ92696 567 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 OSBPL9Q96SU4 736 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 ABHD16BQ9H3Z7 469 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 SMARCAL1Q9NZC9 954 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 FLRT1Q9NZU1 646 aa17.99■□□□□ 0.47
USHBP1-203ENST00000431146 SLC15A5A6NIM6 579 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 KIAA0391O15091 583 aaKnown RBP17.98■□□□□ 0.47
USHBP1-203ENST00000431146 TOM1L1O75674 476 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 LDHAP00338 332 aaKnown RBP17.98■□□□□ 0.47
USHBP1-203ENST00000431146 HLA-DRAP01903 254 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 C4BPAP04003 597 aaKnown RBP17.98■□□□□ 0.47
USHBP1-203ENST00000431146 RHOXF2BP0C7M4 288 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 IQCF3P0C7M6 154 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 H2AFXP16104 143 aaPredicted RBP17.98■□□□□ 0.47
USHBP1-203ENST00000431146 CLDN10P78369 228 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 DUSP28Q4G0W2 176 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 ZPBP2Q6X784 338 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 MTERF4Q7Z6M4 381 aaKnown RBP17.98■□□□□ 0.47
USHBP1-203ENST00000431146 NOP9Q86U38 636 aaKnown RBP17.98■□□□□ 0.47
USHBP1-203ENST00000431146 SAPCD2Q86UD0 394 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 FAM71AQ8IYT1 594 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 RPUSD2Q8IZ73 545 aaKnown RBP17.98■□□□□ 0.47
USHBP1-203ENST00000431146 OR5B17Q8NGF7 314 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 SHC3Q92529 594 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 EMID1Q96A84 441 aaPredicted RBP17.98■□□□□ 0.47
USHBP1-203ENST00000431146 LENG1Q96BZ8 264 aaPredicted RBP17.98■□□□□ 0.47
USHBP1-203ENST00000431146 FAM212AQ96EL1 285 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 RHOXF2Q9BQY4 288 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 JPH2Q9BR39 696 aaPredicted RBP17.98■□□□□ 0.47
USHBP1-203ENST00000431146 RNF216Q9NWF9 866 aaPredicted RBP17.98■□□□□ 0.47
USHBP1-203ENST00000431146 PCDHGC5Q9Y5F6 944 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms