RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 SHANK3Q9BYB0 1731 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 PIK3C2GO75747 1445 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 ATP10DQ9P241 1426 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 TULP4Q9NRJ4 1543 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 ITSN1Q15811 1721 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 CRYBG1Q9Y4K1 1723 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 CCDC189A1A4V9 331 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 SGTAO43765 313 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 DYRK3O43781 588 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 MGEA5O60502 916 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 CUTAO60888 179 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 OPHN1O60890 802 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 PPFIA4O75335 1185 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 APOL3O95236 402 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 MPOP05164 745 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 TYRP1P17643 537 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 XPAP23025 273 aaPredicted RBP4.98□□□□□ -1.61
HMGB3-203ENST00000430118 ITGB7P26010 798 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 APEX1P27695 318 aaKnown RBP4.98□□□□□ -1.61
HMGB3-203ENST00000430118 SERPINB3P29508 390 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 HOXA10P31260 410 aaPredicted RBP4.98□□□□□ -1.61
HMGB3-203ENST00000430118 MCAMP43121 646 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 MAPKAPK2P49137 400 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 HK2P52789 917 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 NRG3P56975 720 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 PPARAQ07869 468 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 MGAT2Q10469 447 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 POLD3Q15054 466 aaPredicted RBP4.98□□□□□ -1.61
HMGB3-203ENST00000430118 RALBP1Q15311 655 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 RSPO4Q2I0M5 234 aaPredicted RBP4.98□□□□□ -1.61
HMGB3-203ENST00000430118 KIAA0753Q2KHM9 967 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 PRR16Q569H4 304 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 BMP8AQ7Z5Y6 402 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 WFDC3Q8IUB2 231 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 GLB1L2Q8IW92 636 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 RBM12BQ8IXT5 1001 aaKnown RBP4.98□□□□□ -1.61
HMGB3-203ENST00000430118 NGDNQ8NEJ9 315 aaKnown RBP4.98□□□□□ -1.61
HMGB3-203ENST00000430118 DEPTORQ8TB45 409 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 IGDCC4Q8TDY8 1250 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 SHISA4Q96DD7 197 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 HIST1H2AHQ96KK5 128 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 FAM167AQ96KS9 214 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 SLC2A13Q96QE2 648 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 HIST1H2AJQ99878 128 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 B3GNT5Q9BYG0 378 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 HAPLN2Q9GZV7 340 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 MAF1Q9H063 256 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 MTG2Q9H4K7 406 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 GALNT8Q9NY28 637 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 PADI4Q9UM07 663 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 DMTF1Q9Y222 760 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 STXBP5LQ9Y2K9 1186 aa4.98□□□□□ -1.61
HMGB3-203ENST00000430118 CRB1P82279 1406 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 LRRC37A3O60309 1634 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 GOLGB1Q14789 3259 aaKnown RBP4.97□□□□□ -1.61
HMGB3-203ENST00000430118 PLEKHH1Q9ULM0 1364 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 A0A088AWK7 358 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 CCDC154A6NI56 674 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 ZNF839A8K0R7 811 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 RASA4BC9J798 803 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 NFIBO00712 420 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 ABLIM1O14639 778 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 RASA4O43374 803 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 PSPNO60542 156 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 PQBP1O60828 265 aaKnown RBP4.97□□□□□ -1.61
HMGB3-203ENST00000430118 COBLO75128 1261 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 SEC24DO94855 1032 aaPredicted RBP4.97□□□□□ -1.61
HMGB3-203ENST00000430118 ARIH2O95376 493 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 PAX3P23760 479 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 EDNRBP24530 442 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 HTR1BP28222 390 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 PEX2P28328 305 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 ECE1P42892 770 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 GRIN1Q05586 938 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 MAP3K12Q12852 859 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 BNIP3Q12983 259 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 STILQ15468 1287 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 LONRF1Q17RB8 773 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 SKIDA1Q1XH10 827 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 DGKKQ5KSL6 1271 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 RNF220Q5VTB9 566 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 NPNTQ6UXI9 565 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 CXXC5Q7LFL8 322 aaKnown RBP4.97□□□□□ -1.61
HMGB3-203ENST00000430118 DAAM2Q86T65 1068 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 TTC7BQ86TV6 843 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 AMIGO3Q86WK7 504 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 PPP1R35Q8TAP8 253 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 GAB3Q8WWW8 586 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 LRTOMTQ8WZ04 291 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 CDK5RAP3Q96JB5 506 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 SGCZQ96LD1 299 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 CCDC138Q96M89 665 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 ADI1Q9BV57 179 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 PCDH18Q9HCL0 1135 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 PTPRHQ9HD43 1115 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 POGKQ9P215 609 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 FTSJ1Q9UET6 329 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.97□□□□□ -1.61
HMGB3-203ENST00000430118 GPR160Q9UJ42 338 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 DBR1Q9UK59 544 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms