RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 RECQL4O94761 1208 aa18.87■□□□□ 0.61
CPSF4-203ENST00000430038 CACNA1HO95180 2353 aa18.87■□□□□ 0.61
CPSF4-203ENST00000430038 URODP06132 367 aa18.87■□□□□ 0.61
CPSF4-203ENST00000430038 MUTP22033 750 aa18.87■□□□□ 0.61
CPSF4-203ENST00000430038 GRIK3Q13003 919 aa18.87■□□□□ 0.61
CPSF4-203ENST00000430038 MAPK7Q13164 816 aa18.87■□□□□ 0.61
CPSF4-203ENST00000430038 GNL2Q13823 731 aaKnown RBP18.87■□□□□ 0.61
CPSF4-203ENST00000430038 RTP2Q5QGT7 225 aa18.87■□□□□ 0.61
CPSF4-203ENST00000430038 LILRA6Q6PI73 481 aa18.87■□□□□ 0.61
CPSF4-203ENST00000430038 PRSS55Q6UWB4 352 aaPredicted RBP18.87■□□□□ 0.61
CPSF4-203ENST00000430038 CD300LGQ6UXG3 332 aa18.87■□□□□ 0.61
CPSF4-203ENST00000430038 ZBTB8OSQ8IWT0 167 aa18.87■□□□□ 0.61
CPSF4-203ENST00000430038 ZDHHC14Q8IZN3 488 aa18.87■□□□□ 0.61
CPSF4-203ENST00000430038 TMX3Q96JJ7 454 aa18.87■□□□□ 0.61
CPSF4-203ENST00000430038 ADAM28Q9UKQ2 775 aa18.87■□□□□ 0.61
CPSF4-203ENST00000430038 USP34Q70CQ2 3546 aa18.87■□□□□ 0.61
CPSF4-203ENST00000430038 CCDC195A0A1B0GUA6 201 aa18.86■□□□□ 0.61
CPSF4-203ENST00000430038 CASTOR2A6NHX0 329 aa18.86■□□□□ 0.61
CPSF4-203ENST00000430038 KIF4AO95239 1232 aa18.86■□□□□ 0.61
CPSF4-203ENST00000430038 TCF15Q12870 199 aa18.86■□□□□ 0.61
CPSF4-203ENST00000430038 MAPK6Q16659 721 aa18.86■□□□□ 0.61
CPSF4-203ENST00000430038 CEP120Q8N960 986 aa18.86■□□□□ 0.61
CPSF4-203ENST00000430038 DEPTORQ8TB45 409 aa18.86■□□□□ 0.61
CPSF4-203ENST00000430038 SNX29Q8TEQ0 813 aa18.86■□□□□ 0.61
CPSF4-203ENST00000430038 ZNF707Q96C28 371 aaPredicted RBP18.86■□□□□ 0.61
CPSF4-203ENST00000430038 RUSC1Q9BVN2 902 aa18.86■□□□□ 0.61
CPSF4-203ENST00000430038 NOL7Q9UMY1 257 aaKnown RBP18.86■□□□□ 0.61
CPSF4-203ENST00000430038 SORCS3Q9UPU3 1222 aa18.86■□□□□ 0.61
CPSF4-203ENST00000430038 GDAQ9Y2T3 454 aa18.86■□□□□ 0.61
CPSF4-203ENST00000430038 DMDP11532 3685 aa18.86■□□□□ 0.61
CPSF4-203ENST00000430038 MYO15AQ9UKN7 3530 aa18.86■□□□□ 0.61
CPSF4-203ENST00000430038 NOTCH4Q99466 2003 aa18.86■□□□□ 0.61
CPSF4-203ENST00000430038 N4BP3O15049 544 aa18.85■□□□□ 0.61
CPSF4-203ENST00000430038 MEFVO15553 781 aaPredicted RBP18.85■□□□□ 0.61
CPSF4-203ENST00000430038 TGM5O43548 720 aa18.85■□□□□ 0.61
CPSF4-203ENST00000430038 HSP90AA2PQ14568 343 aaPredicted RBP18.85■□□□□ 0.61
CPSF4-203ENST00000430038 HAUS3Q68CZ6 603 aa18.85■□□□□ 0.61
CPSF4-203ENST00000430038 ZBTB33Q86T24 672 aa18.85■□□□□ 0.61
CPSF4-203ENST00000430038 TDRD5Q8NAT2 981 aaKnown RBP18.85■□□□□ 0.61
CPSF4-203ENST00000430038 RIN2Q8WYP3 895 aaPredicted RBP18.85■□□□□ 0.61
CPSF4-203ENST00000430038 PNMA5Q96PV4 448 aa18.85■□□□□ 0.61
CPSF4-203ENST00000430038 C2orf40Q9H1Z8 148 aa18.85■□□□□ 0.61
CPSF4-203ENST00000430038 STK39Q9UEW8 545 aa18.85■□□□□ 0.61
CPSF4-203ENST00000430038 USTQ9Y2C2 406 aa18.85■□□□□ 0.61
CPSF4-203ENST00000430038 CITO14578 2027 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 ZMYM2Q9UBW7 1377 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 SFI1A8K8P3 1242 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 ADAM12O43184 909 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 PAPLNO95428 1278 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 CENPBP07199 599 aaPredicted RBP18.84■□□□□ 0.61
CPSF4-203ENST00000430038 ADH1AP07327 375 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 AVPR2P30518 371 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 NPTX2P47972 431 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 PEX3P56589 373 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 TUSC3Q13454 348 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 RABEP1Q15276 862 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 USP41Q3LFD5 358 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 GLRA4Q5JXX5 417 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 RINT1Q6NUQ1 792 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 C1orf186Q6ZWK4 172 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 HACE1Q8IYU2 909 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 CMASQ8NFW8 434 aaPredicted RBP18.84■□□□□ 0.61
CPSF4-203ENST00000430038 LRRC15Q8TF66 581 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 CLSTN3Q9BQT9 956 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 KCNH6Q9H252 994 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 PTPRHQ9HD43 1115 aa18.84■□□□□ 0.61
CPSF4-203ENST00000430038 ABLIM1O14639 778 aa18.83■□□□□ 0.6
CPSF4-203ENST00000430038 HIP1RO75146 1068 aa18.83■□□□□ 0.6
CPSF4-203ENST00000430038 TADA2AO75478 443 aa18.83■□□□□ 0.6
CPSF4-203ENST00000430038 GLUD1P00367 558 aa18.83■□□□□ 0.6
CPSF4-203ENST00000430038 THP07101 528 aa18.83■□□□□ 0.6
CPSF4-203ENST00000430038 GJB2P29033 226 aa18.83■□□□□ 0.6
CPSF4-203ENST00000430038 ATF7IP2Q5U623 682 aa18.83■□□□□ 0.6
CPSF4-203ENST00000430038 C15orf39Q6ZRI6 1047 aa18.83■□□□□ 0.6
CPSF4-203ENST00000430038 TMEM130Q8N3G9 435 aa18.83■□□□□ 0.6
CPSF4-203ENST00000430038 LNX1Q8TBB1 728 aaPredicted RBP18.83■□□□□ 0.6
CPSF4-203ENST00000430038 RSAD2Q8WXG1 361 aa18.83■□□□□ 0.6
CPSF4-203ENST00000430038 KIFAP3Q92845 792 aa18.83■□□□□ 0.6
CPSF4-203ENST00000430038 PLIN2Q99541 437 aa18.83■□□□□ 0.6
CPSF4-203ENST00000430038 NT5C3AQ9H0P0 336 aa18.83■□□□□ 0.6
CPSF4-203ENST00000430038 GOLGA2P5Q9HBQ8 144 aa18.83■□□□□ 0.6
CPSF4-203ENST00000430038 FNIP2Q9P278 1114 aa18.83■□□□□ 0.6
CPSF4-203ENST00000430038 PDCD11Q14690 1871 aaKnown RBP18.82■□□□□ 0.6
CPSF4-203ENST00000430038 NR1I2O75469 434 aa18.82■□□□□ 0.6
CPSF4-203ENST00000430038 PRPHP41219 470 aa18.82■□□□□ 0.6
CPSF4-203ENST00000430038 ATP2C1P98194 919 aaPredicted RBP18.82■□□□□ 0.6
CPSF4-203ENST00000430038 SOX4Q06945 474 aaPredicted RBP18.82■□□□□ 0.6
CPSF4-203ENST00000430038 MTMR3Q13615 1198 aa18.82■□□□□ 0.6
CPSF4-203ENST00000430038 PPP2R5AQ15172 486 aa18.82■□□□□ 0.6
CPSF4-203ENST00000430038 FAM171A1Q5VUB5 890 aa18.82■□□□□ 0.6
CPSF4-203ENST00000430038 MCTP1Q6DN14 999 aa18.82■□□□□ 0.6
CPSF4-203ENST00000430038 ALKAL1Q6UXT8 129 aa18.82■□□□□ 0.6
CPSF4-203ENST00000430038 ST13P5Q8NFI4 369 aaPredicted RBP18.82■□□□□ 0.6
CPSF4-203ENST00000430038 PPP1R10Q96QC0 940 aaKnown RBP18.82■□□□□ 0.6
CPSF4-203ENST00000430038 MYADMQ96S97 322 aa18.82■□□□□ 0.6
CPSF4-203ENST00000430038 ACO2Q99798 780 aaKnown RBP18.82■□□□□ 0.6
CPSF4-203ENST00000430038 DNM3Q9UQ16 869 aa18.82■□□□□ 0.6
CPSF4-203ENST00000430038 TNFSF13BQ9Y275 285 aa18.82■□□□□ 0.6
CPSF4-203ENST00000430038 SSX2IPQ9Y2D8 614 aa18.82■□□□□ 0.6
CPSF4-203ENST00000430038 SPDYE4A6NLX3 237 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms