RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 TRAF1Q13077 416 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 PPP2R5DQ14738 602 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 FOXD4L6Q3SYB3 417 aaPredicted RBP11.25□□□□□ -0.61
ATG4B-211ENST00000429899 EARS2Q5JPH6 523 aaKnown RBP11.25□□□□□ -0.61
ATG4B-211ENST00000429899 FOXD4L3Q6VB84 417 aaPredicted RBP11.25□□□□□ -0.61
ATG4B-211ENST00000429899 TAS1R1Q7RTX1 841 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 PDZD3Q86UT5 571 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 BLIDQ8IZY5 108 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 FAM160A2Q8N612 972 aaPredicted RBP11.25□□□□□ -0.61
ATG4B-211ENST00000429899 METTL13Q8N6R0 699 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 NELL2Q99435 816 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 ARRDC1-AS1Q9H2J1 176 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 BRMS1Q9HCU9 246 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 MRPL17Q9NRX2 175 aaKnown RBP11.25□□□□□ -0.61
ATG4B-211ENST00000429899 KCNH7Q9NS40 1196 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 CELSR3Q9NYQ7 3312 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 DDX11L8A8MPP1 907 aa11.24□□□□□ -0.61
ATG4B-211ENST00000429899 AXIN1O15169 862 aa11.24□□□□□ -0.61
ATG4B-211ENST00000429899 CSDE1O75534 798 aaKnown RBP11.24□□□□□ -0.61
ATG4B-211ENST00000429899 DDHD2O94830 711 aa11.24□□□□□ -0.61
ATG4B-211ENST00000429899 CCNE2O96020 404 aa11.24□□□□□ -0.61
ATG4B-211ENST00000429899 GLUD1P00367 558 aa11.24□□□□□ -0.61
ATG4B-211ENST00000429899 EIF4BP23588 611 aaKnown RBP11.24□□□□□ -0.61
ATG4B-211ENST00000429899 CLK2P49760 499 aaKnown RBP11.24□□□□□ -0.61
ATG4B-211ENST00000429899 CLCN3P51790 818 aa11.24□□□□□ -0.61
ATG4B-211ENST00000429899 ADCY7P51828 1080 aa11.24□□□□□ -0.61
ATG4B-211ENST00000429899 KRT85P78386 507 aa11.24□□□□□ -0.61
ATG4B-211ENST00000429899 PFKPQ01813 784 aa11.24□□□□□ -0.61
ATG4B-211ENST00000429899 ADCY1Q08828 1119 aa11.24□□□□□ -0.61
ATG4B-211ENST00000429899 ITGB3BPQ13352 177 aaPredicted RBP11.24□□□□□ -0.61
ATG4B-211ENST00000429899 ATL3Q6DD88 541 aa11.24□□□□□ -0.61
ATG4B-211ENST00000429899 ELMSAN1Q6PJG2 1045 aa11.24□□□□□ -0.61
ATG4B-211ENST00000429899 ZNF852Q6ZMS4 543 aa11.24□□□□□ -0.61
ATG4B-211ENST00000429899 CCDC60Q8IWA6 550 aaPredicted RBP11.24□□□□□ -0.61
ATG4B-211ENST00000429899 ZNF687Q8N1G0 1237 aa11.24□□□□□ -0.61
ATG4B-211ENST00000429899 USP28Q96RU2 1077 aa11.24□□□□□ -0.61
ATG4B-211ENST00000429899 RPS6KC1Q96S38 1066 aa11.24□□□□□ -0.61
ATG4B-211ENST00000429899 KXD1Q9BQD3 176 aa11.24□□□□□ -0.61
ATG4B-211ENST00000429899 NDRG2Q9UN36 371 aaKnown RBP11.24□□□□□ -0.61
ATG4B-211ENST00000429899 INPP5FQ9Y2H2 1132 aa11.24□□□□□ -0.61
ATG4B-211ENST00000429899 SHROOM3Q8TF72 1996 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 SMCO2A6NFE2 343 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 OFD1O75665 1012 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 ADH1AP07327 375 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 PHKA2P46019 1235 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 NASPP49321 788 aaPredicted RBP11.23□□□□□ -0.61
ATG4B-211ENST00000429899 SLC26A2P50443 739 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 TOB1P50616 345 aaPredicted RBP11.23□□□□□ -0.61
ATG4B-211ENST00000429899 AFF1P51825 1210 aaKnown RBP11.23□□□□□ -0.61
ATG4B-211ENST00000429899 NTHL1P78549 312 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 UBE2SQ16763 222 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 NOMO2Q5JPE7 1267 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 ZNF484Q5JVG2 852 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 HEATR6Q6AI08 1181 aaKnown RBP11.23□□□□□ -0.61
ATG4B-211ENST00000429899 CEP68Q76N32 757 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 TRMT1LQ7Z2T5 733 aaKnown RBP11.23□□□□□ -0.61
ATG4B-211ENST00000429899 PALB2Q86YC2 1186 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 TEX2Q8IWB9 1127 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 ADAM32Q8TC27 787 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 CUL5Q93034 780 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 BBC3Q96PG8 261 aaPredicted RBP11.23□□□□□ -0.61
ATG4B-211ENST00000429899 PRKD2Q9BZL6 878 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 SMOC1Q9H4F8 434 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 C6orf50Q9HD87 102 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 RIC8AQ9NPQ8 531 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 HEBP1Q9NRV9 189 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 PCDHA6Q9UN73 950 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 PCDHA8Q9Y5H6 950 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 NFASCO94856 1347 aa11.23□□□□□ -0.61
ATG4B-211ENST00000429899 WNT7AO00755 349 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 MAFGO15525 162 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 YEATS4O95619 227 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 ZNF806P0C7X5 589 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 FSHRP23945 695 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 GNA11P29992 359 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 CCR3P51677 355 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 SATB1Q01826 763 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 RNASELQ05823 741 aaKnown RBP11.22□□□□□ -0.61
ATG4B-211ENST00000429899 GNL2Q13823 731 aaKnown RBP11.22□□□□□ -0.61
ATG4B-211ENST00000429899 RILPL1Q5EBL4 403 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 RNF43Q68DV7 783 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 KIAA1211LQ6NV74 962 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 ABHD15Q6UXT9 468 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 GRASPQ7Z6J2 395 aaPredicted RBP11.22□□□□□ -0.61
ATG4B-211ENST00000429899 REXO1Q8N1G1 1221 aaKnown RBP11.22□□□□□ -0.61
ATG4B-211ENST00000429899 LRRC71Q8N4P6 559 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 LINC01465Q8N7H1 131 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 BICD2Q8TD16 824 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 LEO1Q8WVC0 666 aaPredicted RBP11.22□□□□□ -0.61
ATG4B-211ENST00000429899 ZNF396Q96N95 335 aaPredicted RBP11.22□□□□□ -0.61
ATG4B-211ENST00000429899 SDF4Q9BRK5 362 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 CHRDQ9H2X0 955 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 GDPD2Q9HCC8 539 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 LMBRD1Q9NUN5 540 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 DPP7Q9UHL4 492 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 CDH7Q9ULB5 785 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 AKT3Q9Y243 479 aa11.22□□□□□ -0.61
ATG4B-211ENST00000429899 MRPS17Q9Y2R5 130 aaKnown RBP11.22□□□□□ -0.61
ATG4B-211ENST00000429899 ZFP37Q9Y6Q3 630 aaPredicted RBP11.22□□□□□ -0.61
ATG4B-211ENST00000429899 MORC2Q9Y6X9 1032 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms