RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 KIAA0825Q8IV33 1275 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 C10orf82Q8WW14 230 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 DHX36Q9H2U1 1008 aaKnown RBP11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 DNAJC18Q9H819 358 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 ZFP69BQ9UJL9 534 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 PCDHA12Q9UN75 941 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 WASF2Q9Y6W5 498 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 KIAA1551Q9HCM1 1747 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 ANKRD62A6NC57 917 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 FAM47DPA6NHR8 397 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 RSPH10B2B2RC85 870 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 RSPH10BP0C881 870 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 IL2RBP14784 551 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 ADCY7P51828 1080 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 ITGA8P53708 1063 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 PSMC6P62333 389 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 PPP1R21Q6ZMI0 780 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 PPP4R3CPQ6ZMV5 832 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 CNKSR2Q8WXI2 1034 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 GATA6Q92908 595 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 MRRFQ96E11 262 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 SYT11Q9BT88 431 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 TIPINQ9BVW5 301 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 GPR88Q9GZN0 384 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 UBN1Q9NPG3 1134 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 ATP8B3O60423 1300 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 MROH7Q68CQ1 1323 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 ADGRA3Q8IWK6 1321 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 USP17L5A8MUK1 530 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 CLDN3O15551 220 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 ECE2O60344 883 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 HSPA6P17066 643 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 RASSF2P50749 326 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 UBE4AQ14139 1066 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 CCDC125Q86Z20 511 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 C4orf33Q8N1A6 199 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 PTPRN2Q92932 1015 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 LZTS2Q9BRK4 669 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 NPHS2Q9NP85 383 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 DMAP1Q9NPF5 467 aaPredicted RBP11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 DCTN4Q9UJW0 460 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 MTUS1Q9ULD2 1270 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 TRAF3IP3Q9Y228 551 aa11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-209ENST00000429836 TAF1P21675 1872 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 MAGEA13PA6NCF6 341 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 MED24O75448 989 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 ASMTLO95671 621 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 LMNAP02545 664 aaKnown RBP11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 FTLP02792 175 aaPredicted RBP11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 FGFR1P11362 822 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 OCRLQ01968 901 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 PABPC4Q13310 644 aaKnown RBP eCLIP11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 CYP4F22Q6NT55 531 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 RHBDF2Q6PJF5 856 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 WDR60Q8WVS4 1066 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 STK33Q9BYT3 514 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 PREBQ9HCU5 417 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 ASTN1O14525 1302 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 MIF4GDA9UHW6 222 aaKnown RBP11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 EXOC3O60645 756 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 TRIM49P0CI25 452 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 TRIM49CP0CI26 452 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 HOXA7P31268 230 aaPredicted RBP11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 SLC34A1Q06495 639 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 ORC2Q13416 577 aaPredicted RBP11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 NLRP9Q7RTR0 991 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 OPTNQ96CV9 577 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 CHST7Q9NS84 486 aa11.82□□□□□ -0.52
SEMA4D-209ENST00000429836 SFI1A8K8P3 1242 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 FOXN3O00409 490 aaPredicted RBP11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 CALUO43852 315 aaPredicted RBP11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 EDF1O60869 148 aaKnown RBP11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 CDH16O75309 829 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 PSMG1O95456 288 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 CLUL1Q15846 466 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 CYP1B1Q16678 543 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 WDR72Q3MJ13 1102 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 PLEKHG4Q58EX7 1191 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 HP1BP3Q5SSJ5 553 aaPredicted RBP11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 C3orf67Q6ZVT6 689 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 PRR11Q96HE9 360 aaPredicted RBP11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 TUBGCP5Q96RT8 1024 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 FAM118BQ9BPY3 351 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 REEP2Q9BRK0 252 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 ZWILCHQ9H900 591 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 KRT82Q9NSB4 513 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 ARL8BQ9NVJ2 186 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 CFAP69A5D8W1 941 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 TRAFD1O14545 582 aaPredicted RBP11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 SPOPO43791 374 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 RTP1P59025 263 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 OVGP1Q12889 678 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 MYBPC3Q14896 1274 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 CBWD6Q4V339 395 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 CBWD3Q5JTY5 395 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 CBWD5Q5RIA9 395 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 OTOAQ7RTW8 1153 aa11.81□□□□□ -0.52
SEMA4D-209ENST00000429836 CLNKQ7Z7G1 428 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms