RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 ANP32CO43423 234 aa7.79□□□□□ -1.16
PTPRK-211ENST00000429595 FSHBP01225 129 aa7.79□□□□□ -1.16
PTPRK-211ENST00000429595 CAPNS1P04632 268 aa7.79□□□□□ -1.16
PTPRK-211ENST00000429595 CYP1A1P04798 512 aaPredicted RBP7.79□□□□□ -1.16
PTPRK-211ENST00000429595 CYP2B6P20813 491 aa7.79□□□□□ -1.16
PTPRK-211ENST00000429595 LTBRP36941 435 aa7.79□□□□□ -1.16
PTPRK-211ENST00000429595 FKBP1AP62942 108 aaKnown RBP7.79□□□□□ -1.16
PTPRK-211ENST00000429595 CC2D1BQ5T0F9 858 aaKnown RBP7.79□□□□□ -1.16
PTPRK-211ENST00000429595 STEAP3Q658P3 488 aa7.79□□□□□ -1.16
PTPRK-211ENST00000429595 ZNF804AQ7Z570 1209 aa7.79□□□□□ -1.16
PTPRK-211ENST00000429595 IGDCC4Q8TDY8 1250 aa7.79□□□□□ -1.16
PTPRK-211ENST00000429595 MICAL1Q8TDZ2 1067 aa7.79□□□□□ -1.16
PTPRK-211ENST00000429595 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.79□□□□□ -1.16
PTPRK-211ENST00000429595 RBPJLQ9UBG7 517 aa7.79□□□□□ -1.16
PTPRK-211ENST00000429595 MGAMO43451 1857 aa7.79□□□□□ -1.16
PTPRK-211ENST00000429595 KCNQ1P51787 676 aa7.78□□□□□ -1.16
PTPRK-211ENST00000429595 TFF2Q03403 129 aa7.78□□□□□ -1.16
PTPRK-211ENST00000429595 LSAMPQ13449 338 aa7.78□□□□□ -1.16
PTPRK-211ENST00000429595 LARP1BQ659C4 914 aaKnown RBP7.78□□□□□ -1.16
PTPRK-211ENST00000429595 MIGA2Q7L4E1 593 aa7.78□□□□□ -1.16
PTPRK-211ENST00000429595 CCAR1Q8IX12 1150 aaKnown RBP7.78□□□□□ -1.16
PTPRK-211ENST00000429595 DNERQ8NFT8 737 aa7.78□□□□□ -1.16
PTPRK-211ENST00000429595 SH3RF3Q8TEJ3 882 aaPredicted RBP7.78□□□□□ -1.16
PTPRK-211ENST00000429595 CLIC6Q96NY7 704 aa7.78□□□□□ -1.16
PTPRK-211ENST00000429595 MPHOSPH8Q99549 860 aa7.78□□□□□ -1.16
PTPRK-211ENST00000429595 TMEM168Q9H0V1 697 aa7.78□□□□□ -1.16
PTPRK-211ENST00000429595 CDIP1Q9H305 208 aa7.78□□□□□ -1.16
PTPRK-211ENST00000429595 L2HGDHQ9H9P8 463 aa7.78□□□□□ -1.16
PTPRK-211ENST00000429595 CLDND1Q9NY35 253 aa7.78□□□□□ -1.16
PTPRK-211ENST00000429595 ACTR10Q9NZ32 417 aa7.78□□□□□ -1.16
PTPRK-211ENST00000429595 LRP2BPQ9P2M1 347 aa7.78□□□□□ -1.16
PTPRK-211ENST00000429595 CROTQ9UKG9 612 aa7.78□□□□□ -1.16
PTPRK-211ENST00000429595 SLC45A1Q9Y2W3 748 aa7.78□□□□□ -1.16
PTPRK-211ENST00000429595 TSC22D4Q9Y3Q8 395 aa7.78□□□□□ -1.16
PTPRK-211ENST00000429595 COL4A1P02462 1669 aa7.78□□□□□ -1.16
PTPRK-211ENST00000429595 AOX1Q06278 1338 aa7.78□□□□□ -1.16
PTPRK-211ENST00000429595 MUC6Q6W4X9 2439 aa7.77□□□□□ -1.17
PTPRK-211ENST00000429595 PI4K2BG5E9Z4 385 aa7.77□□□□□ -1.17
PTPRK-211ENST00000429595 CPP00450 1065 aa7.77□□□□□ -1.17
PTPRK-211ENST00000429595 C6P13671 934 aa7.77□□□□□ -1.17
PTPRK-211ENST00000429595 ZKSCAN1P17029 563 aaPredicted RBP7.77□□□□□ -1.17
PTPRK-211ENST00000429595 KCNJ6P48051 423 aa7.77□□□□□ -1.17
PTPRK-211ENST00000429595 DDX10Q13206 875 aaKnown RBP7.77□□□□□ -1.17
PTPRK-211ENST00000429595 SURF1Q15526 300 aa7.77□□□□□ -1.17
PTPRK-211ENST00000429595 PLEKHH3Q7Z736 793 aa7.77□□□□□ -1.17
PTPRK-211ENST00000429595 TRIB2Q92519 343 aa7.77□□□□□ -1.17
PTPRK-211ENST00000429595 CHAMP1Q96JM3 812 aa7.77□□□□□ -1.17
PTPRK-211ENST00000429595 MSRAQ9UJ68 235 aa7.77□□□□□ -1.17
PTPRK-211ENST00000429595 ECM29Q5VYK3 1845 aa7.77□□□□□ -1.17
PTPRK-211ENST00000429595 TCF20Q9UGU0 1960 aaKnown RBP7.77□□□□□ -1.17
PTPRK-211ENST00000429595 PCCAP05165 728 aaPredicted RBP7.76□□□□□ -1.17
PTPRK-211ENST00000429595 KLRK1P26718 216 aa7.76□□□□□ -1.17
PTPRK-211ENST00000429595 CNGA1P29973 690 aa7.76□□□□□ -1.17
PTPRK-211ENST00000429595 GCLCP48506 637 aaPredicted RBP7.76□□□□□ -1.17
PTPRK-211ENST00000429595 EPHB4P54760 987 aa7.76□□□□□ -1.17
PTPRK-211ENST00000429595 MOGSQ13724 837 aa7.76□□□□□ -1.17
PTPRK-211ENST00000429595 FAM110CQ1W6H9 321 aa7.76□□□□□ -1.17
PTPRK-211ENST00000429595 SLC35F1Q5T1Q4 408 aa7.76□□□□□ -1.17
PTPRK-211ENST00000429595 TMC5Q6UXY8 1006 aa7.76□□□□□ -1.17
PTPRK-211ENST00000429595 PROSER1Q86XN7 944 aa7.76□□□□□ -1.17
PTPRK-211ENST00000429595 HERVK_113Q902F9 699 aa7.76□□□□□ -1.17
PTPRK-211ENST00000429595 CCDC140Q96MF4 163 aa7.76□□□□□ -1.17
PTPRK-211ENST00000429595 KLC2Q9H0B6 622 aa7.76□□□□□ -1.17
PTPRK-211ENST00000429595 CCSER2Q9H7U1 834 aa7.76□□□□□ -1.17
PTPRK-211ENST00000429595 MYOTQ9UBF9 498 aa7.76□□□□□ -1.17
PTPRK-211ENST00000429595 NPFFR2Q9Y5X5 522 aa7.76□□□□□ -1.17
PTPRK-211ENST00000429595 ZHX2Q9Y6X8 837 aa7.76□□□□□ -1.17
PTPRK-211ENST00000429595 BDP1A6H8Y1 2624 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 NPEPPSL1A6NEC2 478 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 ERC2O15083 957 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 ALADP13716 330 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 TACR2P21452 398 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 CCND3P30281 292 aaPredicted RBP7.75□□□□□ -1.17
PTPRK-211ENST00000429595 GRIA2P42262 883 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 CACNB3P54284 484 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 FPGSQ05932 587 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 MFSD14BQ5SR56 506 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 MAP3K21Q5TCX8 1036 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 CCDC174Q6PII3 467 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 SLC39A5Q6ZMH5 540 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 FAM83AQ86UY5 434 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 KBTBD2Q8IY47 623 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 CCDC191Q8NCU4 936 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 KISS1RQ969F8 398 aaPredicted RBP7.75□□□□□ -1.17
PTPRK-211ENST00000429595 WWC2-AS2Q96NR7 200 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 TMEM209Q96SK2 561 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 EPB41L1Q9H4G0 881 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 SLC28A3Q9HAS3 691 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 CWC25Q9NXE8 425 aaPredicted RBP7.75□□□□□ -1.17
PTPRK-211ENST00000429595 CHPF2Q9P2E5 772 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 GJD2Q9UKL4 321 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 COG5Q9UP83 839 aa7.75□□□□□ -1.17
PTPRK-211ENST00000429595 MYBBP1AQ9BQG0 1328 aaKnown RBP7.75□□□□□ -1.17
PTPRK-211ENST00000429595 KBTBD13C9JR72 458 aa7.74□□□□□ -1.17
PTPRK-211ENST00000429595 DNM1LO00429 736 aa7.74□□□□□ -1.17
PTPRK-211ENST00000429595 MSCO60682 206 aa7.74□□□□□ -1.17
PTPRK-211ENST00000429595 IL1R1P14778 569 aa7.74□□□□□ -1.17
PTPRK-211ENST00000429595 PPP2CBP62714 309 aa7.74□□□□□ -1.17
PTPRK-211ENST00000429595 PPP2CAP67775 309 aa7.74□□□□□ -1.17
PTPRK-211ENST00000429595 PABPC4Q13310 644 aaKnown RBP eCLIP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms