RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 KRT72Q14CN4 511 aa15.36■□□□□ 0.05
SYNGAP1-203ENST00000428982 MEA1Q16626 185 aa15.36■□□□□ 0.05
SYNGAP1-203ENST00000428982 MARK2Q7KZI7 788 aaKnown RBP15.36■□□□□ 0.05
SYNGAP1-203ENST00000428982 PPP2R3CQ969Q6 453 aa15.36■□□□□ 0.05
SYNGAP1-203ENST00000428982 CENPTQ96BT3 561 aa15.36■□□□□ 0.05
SYNGAP1-203ENST00000428982 MLXIPLQ9NP71 852 aa15.36■□□□□ 0.05
SYNGAP1-203ENST00000428982 GDF3Q9NR23 364 aa15.36■□□□□ 0.05
SYNGAP1-203ENST00000428982 METTL5Q9NRN9 209 aaKnown RBP15.36■□□□□ 0.05
SYNGAP1-203ENST00000428982 CEP72Q9P209 647 aa15.36■□□□□ 0.05
SYNGAP1-203ENST00000428982 GSTTP1A0A1W2PQM5 241 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 RAD51CO43502 376 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 KDM1AO60341 852 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 RGS2P41220 211 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 CCDC153Q494R4 210 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 ASPRV1Q53RT3 343 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 GPATCH4Q5T3I0 446 aaKnown RBP15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 SLFN13Q68D06 897 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 SERPINA10Q9UK55 444 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 UBR2Q8IWV8 1755 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 A0A087X0B3 334 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 RASGRF2O14827 1237 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 HARSP12081 509 aaKnown RBP15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 RBM46Q8TBY0 533 aaKnown RBP15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 KBTBD4Q9NVX7 518 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 SLC12A6Q9UHW9 1150 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 SART1O43290 800 aaKnown RBP15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 MED21Q13503 144 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 DAB2IPQ5VWQ8 1189 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 FAAH2Q6GMR7 532 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 SULF1Q8IWU6 871 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 DCPSQ96C86 337 aaKnown RBP15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 NLRC4Q9NPP4 1024 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 CLIC5Q9NZA1 410 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 PCDHA6Q9UN73 950 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 PCDHA8Q9Y5H6 950 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 SCINQ9Y6U3 715 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 FRMPD2Q68DX3 1309 aaPredicted RBP15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 C4BP0C0L5 1744 aa15.35■□□□□ 0.05
SYNGAP1-203ENST00000428982 ANKRD62A6NC57 917 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 GDF11O95390 407 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 TARSP26639 723 aaKnown RBP15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 ARID5AQ03989 594 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 TTI2Q6NXR4 508 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 CDC42EP5Q6NZY7 148 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 PPP4R3CPQ6ZMV5 832 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 KRT26Q7Z3Y9 468 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 ADGRA1Q86SQ6 560 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 RSPH1Q8WYR4 309 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 PNMA3Q9UL41 463 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 SNX3O60493 162 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 SHBGP04278 402 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 DDX42Q86XP3 938 aaKnown RBP eCLIP15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 METTL14Q9HCE5 456 aaKnown RBP15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 CNOT8Q9UFF9 292 aaKnown RBP15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 HAO1Q9UJM8 370 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 SLC26A4O43511 780 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 HERC4Q5GLZ8 1057 aaPredicted RBP15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 ANKRD40Q6AI12 368 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 ANO5Q75V66 913 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 CHURC1Q8WUH1 139 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 TRAF3IP3Q9Y228 551 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 LZTS1Q9Y250 596 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 ALADP13716 330 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 SMARCA1P28370 1054 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 PRKG1Q13976 671 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 GSTA3Q16772 222 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 OTUD6AQ7L8S5 288 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 ASAP3Q8TDY4 903 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 LNPEPQ9UIQ6 1025 aa15.34■□□□□ 0.05
SYNGAP1-203ENST00000428982 MCF2LO15068 1137 aa15.33■□□□□ 0.05
SYNGAP1-203ENST00000428982 GYG2O15488 501 aa15.33■□□□□ 0.05
SYNGAP1-203ENST00000428982 TPBGLP0DKB5 382 aa15.33■□□□□ 0.05
SYNGAP1-203ENST00000428982 LRRC74BQ6ZQY2 392 aa15.33■□□□□ 0.05
SYNGAP1-203ENST00000428982 TMEM179Q6ZVK1 233 aa15.33■□□□□ 0.05
SYNGAP1-203ENST00000428982 TBCKQ8TEA7 893 aa15.33■□□□□ 0.05
SYNGAP1-203ENST00000428982 TGS1Q96RS0 853 aaKnown RBP15.33■□□□□ 0.05
SYNGAP1-203ENST00000428982 CCDC77Q9BR77 488 aa15.33■□□□□ 0.05
SYNGAP1-203ENST00000428982 SEPT11Q9NVA2 429 aaKnown RBP15.33■□□□□ 0.05
SYNGAP1-203ENST00000428982 PLAGL2Q9UPG8 496 aa15.33■□□□□ 0.05
SYNGAP1-203ENST00000428982 EMC10Q5UCC4 262 aa15.33■□□□□ 0.04
SYNGAP1-203ENST00000428982 PDXDC1Q6P996 788 aa15.33■□□□□ 0.04
SYNGAP1-203ENST00000428982 NEDD1Q8NHV4 660 aa15.33■□□□□ 0.04
SYNGAP1-203ENST00000428982 DQX1Q8TE96 717 aaKnown RBP15.33■□□□□ 0.04
SYNGAP1-203ENST00000428982 AP1M1Q9BXS5 423 aa15.33■□□□□ 0.04
SYNGAP1-203ENST00000428982 RTFDC1Q9BY42 306 aaPredicted RBP15.33■□□□□ 0.04
SYNGAP1-203ENST00000428982 AS3MTQ9HBK9 375 aa15.33■□□□□ 0.04
SYNGAP1-203ENST00000428982 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.33■□□□□ 0.04
SYNGAP1-203ENST00000428982 DAPK3O43293 454 aa15.33■□□□□ 0.04
SYNGAP1-203ENST00000428982 ASLP04424 464 aa15.33■□□□□ 0.04
SYNGAP1-203ENST00000428982 WDR78Q5VTH9 848 aa15.33■□□□□ 0.04
SYNGAP1-203ENST00000428982 ARHGEF18Q6ZSZ5 1173 aa15.33■□□□□ 0.04
SYNGAP1-203ENST00000428982 SYN2Q92777 582 aaPredicted RBP15.33■□□□□ 0.04
SYNGAP1-203ENST00000428982 ZNF184Q99676 751 aaPredicted RBP15.33■□□□□ 0.04
SYNGAP1-203ENST00000428982 OCEL1Q9H607 264 aa15.33■□□□□ 0.04
SYNGAP1-203ENST00000428982 NDE1Q9NXR1 346 aa15.33■□□□□ 0.04
SYNGAP1-203ENST00000428982 CAPN6Q9Y6Q1 641 aa15.33■□□□□ 0.04
SYNGAP1-203ENST00000428982 KRT75O95678 551 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 PAEPP09466 180 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 EIF2B2P49770 351 aaKnown RBP15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 POLR2FP61218 127 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms