RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.66□□□□□ -0.862e-6■■■■■ 33.6
SMC6-204ENST00000428868 STARD7Q9NQZ5 370 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 FAM207AQ9NSI2 230 aaPredicted RBP9.66□□□□□ -0.86
SMC6-204ENST00000428868 AGPAT5Q9NUQ2 364 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 IMPACTQ9P2X3 320 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 OGDHLQ9ULD0 1010 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 PYCARDQ9ULZ3 195 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 TNFSF13BQ9Y275 285 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 NOC2LQ9Y3T9 749 aaKnown RBP9.66□□□□□ -0.86
SMC6-204ENST00000428868 TRPV2Q9Y5S1 764 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 KIAA1671Q9BY89 1806 aa9.66□□□□□ -0.86
SMC6-204ENST00000428868 KBTBD13C9JR72 458 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 OGTO15294 1046 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 CLDN3O15551 220 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 MFAP3LO75121 409 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 CABYRO75952 493 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 NPTXRO95502 500 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 TPM2P07951 284 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 KRT13P13646 458 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 SCP2P22307 547 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 PON1P27169 355 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 HOXA11P31270 313 aaPredicted RBP9.65□□□□□ -0.86
SMC6-204ENST00000428868 MYL7Q01449 175 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 ENOX2Q16206 610 aaKnown RBP9.65□□□□□ -0.86
SMC6-204ENST00000428868 TMEM132AQ24JP5 1023 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 SLFN12LQ6IEE8 588 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 TAF2Q6P1X5 1199 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 FBXO46Q6PJ61 603 aaPredicted RBP9.65□□□□□ -0.86
SMC6-204ENST00000428868 TRAF7Q6Q0C0 670 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 INTS8Q75QN2 995 aaKnown RBP9.65□□□□□ -0.86
SMC6-204ENST00000428868 CATSPER4Q7RTX7 472 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 BRSK2Q8IWQ3 736 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 LRRC8AQ8IWT6 810 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 C17orf53Q8N3J3 647 aaPredicted RBP9.65□□□□□ -0.86
SMC6-204ENST00000428868 ARRDC4Q8NCT1 418 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 DIS3LQ8TF46 1054 aaKnown RBP9.65□□□□□ -0.86
SMC6-204ENST00000428868 SEMA4DQ92854 862 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 PRIMPOLQ96LW4 560 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 PCMTD1Q96MG8 357 aaPredicted RBP9.65□□□□□ -0.86
SMC6-204ENST00000428868 GLT1D1Q96MS3 346 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 TCHPQ9BT92 498 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 EIF2AQ9BY44 585 aaKnown RBP9.65□□□□□ -0.86
SMC6-204ENST00000428868 CELF4Q9BZC1 486 aaKnown RBP9.65□□□□□ -0.86
SMC6-204ENST00000428868 SENP6Q9GZR1 1112 aaPredicted RBP9.65□□□□□ -0.86
SMC6-204ENST00000428868 TMEM117Q9H0C3 514 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 RBAKQ9NYW8 714 aaPredicted RBP9.65□□□□□ -0.86
SMC6-204ENST00000428868 GCNT4Q9P109 453 aa9.65□□□□□ -0.86
SMC6-204ENST00000428868 CPSF3Q9UKF6 684 aaKnown RBP9.65□□□□□ -0.86
SMC6-204ENST00000428868 A0A0U1RQG5 324 aaPredicted RBP9.64□□□□□ -0.87
SMC6-204ENST00000428868 A0A1B0GUA9 196 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 ZNF233A6NK53 670 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 GOLGA6L6A8MZA4 724 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 ARVCFO00192 962 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 DNM1LO00429 736 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 ERLIN2O94905 339 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 PNMA6AP0CW24 399 aaPredicted RBP9.64□□□□□ -0.87
SMC6-204ENST00000428868 CXCL8P10145 99 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 DLATP10515 647 aaKnown RBP9.64□□□□□ -0.87
SMC6-204ENST00000428868 EIF4BP23588 611 aaKnown RBP9.64□□□□□ -0.87
SMC6-204ENST00000428868 THPOP40225 353 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 CRYBB1P53674 252 aaPredicted RBP9.64□□□□□ -0.87
SMC6-204ENST00000428868 PTPN11Q06124 597 aaPredicted RBP9.64□□□□□ -0.87
SMC6-204ENST00000428868 PPP2R3AQ06190 1150 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 PSMD6Q15008 389 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 EPC2Q52LR7 807 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 UBXN11Q5T124 520 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 ZNF618Q5T7W0 954 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 ARHGEF19Q8IW93 802 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 EFCAB13Q8IY85 973 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 OR5B17Q8NGF7 314 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 LMO3Q8TAP4 145 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 TMC2Q8TDI7 906 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 BAP1Q92560 729 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 CRISPLD2Q9H0B8 497 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 INTS2Q9H0H0 1204 aaKnown RBP9.64□□□□□ -0.87
SMC6-204ENST00000428868 AGO3Q9H9G7 860 aaKnown RBP9.64□□□□□ -0.87
SMC6-204ENST00000428868 NLRC4Q9NPP4 1024 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 RNF19AQ9NV58 838 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 PIN4Q9Y237 131 aaKnown RBP9.64□□□□□ -0.87
SMC6-204ENST00000428868 FHOD1Q9Y613 1164 aa9.64□□□□□ -0.87
SMC6-204ENST00000428868 UMODL1Q5DID0 1318 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 AKR1B15C9JRZ8 316 aaPredicted RBP9.63□□□□□ -0.87
SMC6-204ENST00000428868 KIAA0391O15091 583 aaKnown RBP9.63□□□□□ -0.87
SMC6-204ENST00000428868 MGEA5O60502 916 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 VNN1O95497 513 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 LDHAP00338 332 aaKnown RBP9.63□□□□□ -0.87
SMC6-204ENST00000428868 STAG3L1P0CL83 205 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 MCF2P10911 925 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 GHRP10912 638 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 SFPQP23246 707 aaKnown RBP eCLIP9.63□□□□□ -0.87
SMC6-204ENST00000428868 MXI1P50539 228 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 CDK7P50613 346 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 ATN1P54259 1190 aaPredicted RBP9.63□□□□□ -0.87
SMC6-204ENST00000428868 GSDMDP57764 484 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 POLR2FP61218 127 aaKnown RBP9.63□□□□□ -0.87
SMC6-204ENST00000428868 PTK7Q13308 1070 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 MBTPS1Q14703 1052 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 EXOC3L4Q17RC7 722 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 FBXO47Q5MNV8 452 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 KLHDC7AQ5VTJ3 777 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms