RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 AGPAT5Q9NUQ2 364 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 ARMCX3Q9UH62 379 aaPredicted RBP10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 LRRIQ3A6PVS8 624 aaPredicted RBP10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 ACRP10323 421 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 GATMP50440 423 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 KCNMA1Q12791 1236 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 TFDP1Q14186 410 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 COBLL1Q53SF7 1204 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 TWF2Q6IBS0 349 aaKnown RBP10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 TRIM59Q8IWR1 403 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 ZMAT2Q96NC0 199 aaKnown RBP10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 TIPINQ9BVW5 301 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 MRPL4Q9BYD3 311 aaKnown RBP10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 GCOM2Q9BZD3 368 aaPredicted RBP10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 ST6GALNAC4Q9H4F1 302 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 THAP9Q9H5L6 903 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 TMEM206Q9H813 350 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 C17orf75Q9HAS0 396 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 NLRC4Q9NPP4 1024 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 MAGEC2Q9UBF1 373 aaPredicted RBP10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 CITO14578 2027 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 ANK1P16157 1881 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 A0A1B0GTH6 734 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 TRIM43BA6NCK2 446 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 PPEF2O14830 753 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 RPS6KA5O75582 802 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 TOM1L1O75674 476 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 CAVIN2O95810 425 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 NFICP08651 508 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 GTF2F1P35269 517 aaKnown RBP eCLIP10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 FXR1P51114 621 aaKnown RBP eCLIP10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 MGAT3Q09327 533 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 EDRF1Q3B7T1 1238 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 E4F1Q66K89 784 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 FAM117BQ6P1L5 589 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 CCDC186Q7Z3E2 898 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 RTN4RL1Q86UN2 441 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 SEMA4DQ92854 862 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 C18orf25Q96B23 403 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 TRIM43Q96BQ3 446 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 PCMTD1Q96MG8 357 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 ARID3AQ99856 593 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 MTMR12Q9C0I1 747 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 RBAKQ9NYW8 714 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 LIMA1Q9UHB6 759 aaKnown RBP10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 FRMD4BQ9Y2L6 1034 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 SCN1AP35498 2009 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 CST3P01034 146 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 STAG3L1P0CL83 205 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 GNAT1P11488 350 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 SSTR3P32745 418 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 ARID5AQ03989 594 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 BFSP1Q12934 665 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 VWA3BQ502W6 1294 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 FBXO47Q5MNV8 452 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 UBXN11Q5T124 520 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 RRAGAQ7L523 313 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 SESTD1Q86VW0 696 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 EFCAB13Q8IY85 973 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 SLC43A3Q8NBI5 491 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 VWCEQ96DN2 955 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 PYCARDQ9ULZ3 195 aa10.35□□□□□ -0.75
HMGCLL1-206ENST00000428842 A0A1B0GUA9 196 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 KPNA6O60684 536 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 EPB41P11171 864 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 COL6A1P12109 1028 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 TNNI1P19237 187 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 PSMC2P35998 433 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 PBX3P40426 434 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 EFNA5P52803 228 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 RBM10P98175 930 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 RBL2Q08999 1139 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 SLC10A6Q3KNW5 377 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 GLIPR1L2Q4G1C9 344 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 PAN2Q504Q3 1202 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 MPZL3Q6UWV2 235 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 TSHZ1Q6ZSZ6 1077 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 STXBP4Q6ZWJ1 553 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 GPD1LQ8N335 351 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 DBF4BQ8NFT6 615 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 TAS1R2Q8TE23 839 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 LINC01599Q8WXQ3 324 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 JPH2Q9BR39 696 aaPredicted RBP10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 PAAF1Q9BRP4 392 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 HIPK3Q9H422 1215 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 TMEM134Q9H6X4 195 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 CNTNAP2Q9UHC6 1331 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 ALPK3Q96L96 1907 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 LACTBL1A8MY62 500 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 CSPG5O95196 566 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 CD4P01730 458 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 FGFR1P11362 822 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 PROZP22891 400 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 CASP14P31944 242 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 VAMP7P51809 220 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 CRYBB1P53674 252 aaPredicted RBP10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 TFAMQ00059 246 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 CYP24A1Q07973 514 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms