RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 MYBL1P10243 752 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 TCF3P15923 654 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 HSD17B4P51659 736 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 PSMC1P62191 440 aaKnown RBP9.47□□□□□ -0.89
CTNND1-208ENST00000428599 ANKRD40Q6AI12 368 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 OOSP2Q86WS3 158 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 PASD1Q8IV76 773 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 DDIASQ8IXT1 998 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 YY1AP1Q9H869 796 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 C6orf203Q9P0P8 240 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-208ENST00000428599 RCOR1Q9UKL0 485 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 A0A0G2JND7 137 aa9.46□□□□□ -0.89
CTNND1-208ENST00000428599 CXCR5P32302 372 aa9.46□□□□□ -0.89
CTNND1-208ENST00000428599 DAB2P98082 770 aa9.46□□□□□ -0.89
CTNND1-208ENST00000428599 ROR1Q01973 937 aa9.46□□□□□ -0.89
CTNND1-208ENST00000428599 GRM4Q14833 912 aa9.46□□□□□ -0.89
CTNND1-208ENST00000428599 MB21D2Q8IYB1 491 aaPredicted RBP9.46□□□□□ -0.89
CTNND1-208ENST00000428599 KIF12Q96FN5 646 aa9.46□□□□□ -0.89
CTNND1-208ENST00000428599 NDE1Q9NXR1 346 aa9.46□□□□□ -0.89
CTNND1-208ENST00000428599 DAGLAQ9Y4D2 1042 aa9.46□□□□□ -0.89
CTNND1-208ENST00000428599 SLC16A4O15374 487 aa9.46□□□□□ -0.89
CTNND1-208ENST00000428599 SUPT3HO75486 399 aa9.46□□□□□ -0.89
CTNND1-208ENST00000428599 AKR1B1P15121 316 aa9.46□□□□□ -0.89
CTNND1-208ENST00000428599 GPC5P78333 572 aa9.46□□□□□ -0.89
CTNND1-208ENST00000428599 NNTQ13423 1086 aa9.46□□□□□ -0.89
CTNND1-208ENST00000428599 NKX1-1Q15270 411 aaPredicted RBP9.46□□□□□ -0.89
CTNND1-208ENST00000428599 NBPF20Q3BBV1 942 aa9.46□□□□□ -0.89
CTNND1-208ENST00000428599 TRIM60Q495X7 471 aa9.46□□□□□ -0.89
CTNND1-208ENST00000428599 SWSAP1Q6NVH7 229 aa9.46□□□□□ -0.89
CTNND1-208ENST00000428599 SPATA31D1Q6ZQQ2 1576 aa9.46□□□□□ -0.89
CTNND1-208ENST00000428599 SCFD1Q8WVM8 642 aa9.46□□□□□ -0.89
CTNND1-208ENST00000428599 ABTB1Q969K4 478 aaPredicted RBP9.46□□□□□ -0.89
CTNND1-208ENST00000428599 ZBTB12Q9Y330 459 aaPredicted RBP9.46□□□□□ -0.89
CTNND1-208ENST00000428599 FGGP02679 453 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 ARHGEF7Q14155 803 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 SLC15A2Q16348 729 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 TEX9Q8N6V9 391 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 PPHLN1Q8NEY8 458 aaKnown RBP9.46□□□□□ -0.9
CTNND1-208ENST00000428599 PLEKHA5Q9HAU0 1116 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 ZFYVE28Q9HCC9 887 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 USP42Q9H9J4 1324 aaKnown RBP9.46□□□□□ -0.9
CTNND1-208ENST00000428599 AP3B1O00203 1094 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 GSNP06396 782 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 P4HBP07237 508 aaKnown RBP9.46□□□□□ -0.9
CTNND1-208ENST00000428599 AKT1P31749 480 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 PEX19P40855 299 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 HDAC4P56524 1084 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 SFSWAPQ12872 951 aaKnown RBP9.46□□□□□ -0.9
CTNND1-208ENST00000428599 MAPRE2Q15555 327 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 STKLD1Q8NE28 680 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.46□□□□□ -0.94e-16■□□□□ 9.4
CTNND1-208ENST00000428599 CCDC90BQ9GZT6 254 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 GABBR1Q9UBS5 961 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 PNPLA7Q6ZV29 1317 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 CCDC188H7C350 402 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 TMED1Q13445 227 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 DPCR1Q3MIW9 517 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 PAGE5Q96GU1 130 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 NDEL1Q9GZM8 345 aa9.46□□□□□ -0.9
CTNND1-208ENST00000428599 RNF103-CHMP3A0A140T963 221 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 TARSL2A2RTX5 802 aaKnown RBP9.45□□□□□ -0.9
CTNND1-208ENST00000428599 ATP8B1O43520 1251 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 CSF1RP07333 972 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 GNA15P30679 374 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 PHKG1Q16816 387 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 AP1ARQ63HQ0 302 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 ADGRF4Q8IZF3 695 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 HIPK4Q8NE63 616 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 FAM20AQ96MK3 541 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 ACTR5Q9H9F9 607 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-208ENST00000428599 GIMAP4Q9NUV9 329 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 SH3BP1Q9Y3L3 701 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 WDR19Q8NEZ3 1342 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 KIAA1210Q9ULL0 1709 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 PRRG1O14668 218 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 RALBP11234 206 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 DPEP1P16444 411 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 LAMB3Q13751 1172 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 ARHGAP15Q53QZ3 475 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 UNC13DQ70J99 1090 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 PITPNM3Q9BZ71 974 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 PIK3R2O00459 728 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 TADA3O75528 432 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 NR3C1P04150 777 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 CHRNA3P32297 505 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 QARSP47897 775 aaKnown RBP9.45□□□□□ -0.9
CTNND1-208ENST00000428599 PSMC5P62195 406 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 CACNB2Q08289 660 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-208ENST00000428599 TAF1CQ15572 869 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-208ENST00000428599 CCDC85BQ15834 202 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-208ENST00000428599 FASTKD1Q53R41 847 aaKnown RBP9.45□□□□□ -0.9
CTNND1-208ENST00000428599 PLEKHM3Q6ZWE6 761 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 TBC1D1Q86TI0 1168 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-208ENST00000428599 NUDCD3Q8IVD9 361 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 CYTH2Q99418 400 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 DHX35Q9H5Z1 703 aaKnown RBP9.45□□□□□ -0.9
CTNND1-208ENST00000428599 STN1Q9H668 368 aaKnown RBP9.45□□□□□ -0.9
CTNND1-208ENST00000428599 RPAP3Q9H6T3 665 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-208ENST00000428599 ELP3Q9H9T3 547 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 BCL2L12Q9HB09 334 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms