RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 ZNF713Q8N859 430 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-209ENST00000428450 CNNM3Q8NE01 707 aa12.89□□□□□ -0.35
DDX39B-209ENST00000428450 GSTCDQ8NEC7 633 aa12.89□□□□□ -0.35
DDX39B-209ENST00000428450 ING5Q8WYH8 240 aa12.89□□□□□ -0.35
DDX39B-209ENST00000428450 MCRS1Q96EZ8 462 aa12.89□□□□□ -0.35
DDX39B-209ENST00000428450 EIF2AQ9BY44 585 aaKnown RBP12.89□□□□□ -0.35
DDX39B-209ENST00000428450 SEPT9Q9UHD8 586 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-209ENST00000428450 IPPQ9Y573 584 aa12.89□□□□□ -0.35
DDX39B-209ENST00000428450 GREB1Q4ZG55 1949 aa12.88□□□□□ -0.35
DDX39B-209ENST00000428450 SRRM3A6NNA2 597 aaPredicted RBP12.88□□□□□ -0.35
DDX39B-209ENST00000428450 NRG2O14511 850 aaPredicted RBP12.88□□□□□ -0.35
DDX39B-209ENST00000428450 MSH4O15457 936 aa12.88□□□□□ -0.35
DDX39B-209ENST00000428450 ADAM12O43184 909 aa12.88□□□□□ -0.35
DDX39B-209ENST00000428450 NR1I2O75469 434 aa12.88□□□□□ -0.35
DDX39B-209ENST00000428450 PAPSS2O95340 614 aaPredicted RBP12.88□□□□□ -0.35
DDX39B-209ENST00000428450 FCARP24071 287 aa12.88□□□□□ -0.35
DDX39B-209ENST00000428450 SFNP31947 248 aa12.88□□□□□ -0.35
DDX39B-209ENST00000428450 NUCB1Q02818 461 aa12.88□□□□□ -0.35
DDX39B-209ENST00000428450 RING1Q06587 406 aa12.88□□□□□ -0.35
DDX39B-209ENST00000428450 SLC5A9Q2M3M2 681 aa12.88□□□□□ -0.35
DDX39B-209ENST00000428450 PABPC1LQ4VXU2 614 aaKnown RBP12.88□□□□□ -0.35
DDX39B-209ENST00000428450 SRGAP1Q7Z6B7 1085 aa12.88□□□□□ -0.35
DDX39B-209ENST00000428450 MICU3Q86XE3 530 aa12.88□□□□□ -0.35
DDX39B-209ENST00000428450 LNX1Q8TBB1 728 aaPredicted RBP12.88□□□□□ -0.35
DDX39B-209ENST00000428450 FAM3CQ92520 227 aa12.88□□□□□ -0.35
DDX39B-209ENST00000428450 RABGGTAQ92696 567 aa12.88□□□□□ -0.35
DDX39B-209ENST00000428450 ELSPBP1Q96BH3 223 aa12.88□□□□□ -0.35
DDX39B-209ENST00000428450 UNC45AQ9H3U1 944 aa12.88□□□□□ -0.35
DDX39B-209ENST00000428450 GDE1Q9NZC3 331 aa12.88□□□□□ -0.35
DDX39B-209ENST00000428450 HES2Q9Y543 173 aa12.88□□□□□ -0.35
DDX39B-209ENST00000428450 CHMP2AO43633 222 aa12.87□□□□□ -0.35
DDX39B-209ENST00000428450 HOXC13P31276 330 aa12.87□□□□□ -0.35
DDX39B-209ENST00000428450 JAK3P52333 1124 aa12.87□□□□□ -0.35
DDX39B-209ENST00000428450 GRM2Q14416 872 aa12.87□□□□□ -0.35
DDX39B-209ENST00000428450 CCDC6Q16204 474 aa12.87□□□□□ -0.35
DDX39B-209ENST00000428450 UVSSAQ2YD98 709 aa12.87□□□□□ -0.35
DDX39B-209ENST00000428450 SGMS1Q86VZ5 419 aa12.87□□□□□ -0.35
DDX39B-209ENST00000428450 MAP4K3Q8IVH8 894 aa12.87□□□□□ -0.35
DDX39B-209ENST00000428450 SPEM1Q8N4L4 309 aa12.87□□□□□ -0.35
DDX39B-209ENST00000428450 EXOC6Q8TAG9 804 aa12.87□□□□□ -0.35
DDX39B-209ENST00000428450 SLC7A14Q8TBB6 771 aa12.87□□□□□ -0.35
DDX39B-209ENST00000428450 PIK3R5Q8WYR1 880 aa12.87□□□□□ -0.35
DDX39B-209ENST00000428450 GJA10Q969M2 543 aa12.87□□□□□ -0.35
DDX39B-209ENST00000428450 RIT2Q99578 217 aa12.87□□□□□ -0.35
DDX39B-209ENST00000428450 LRRC2Q9BYS8 371 aa12.87□□□□□ -0.35
DDX39B-209ENST00000428450 ARRDC1-AS1Q9H2J1 176 aa12.87□□□□□ -0.35
DDX39B-209ENST00000428450 MRPS23Q9Y3D9 190 aaKnown RBP12.87□□□□□ -0.35
DDX39B-209ENST00000428450 COL4A3BPQ9Y5P4 624 aa12.87□□□□□ -0.35
DDX39B-209ENST00000428450 FREM2Q5SZK8 3169 aa12.87□□□□□ -0.35
DDX39B-209ENST00000428450 ASH1LQ9NR48 2969 aaKnown RBP12.86□□□□□ -0.35
DDX39B-209ENST00000428450 COL4A2P08572 1712 aa12.86□□□□□ -0.35
DDX39B-209ENST00000428450 AXIN1O15169 862 aa12.86□□□□□ -0.35
DDX39B-209ENST00000428450 AXDND1Q5T1B0 1012 aaPredicted RBP12.86□□□□□ -0.35
DDX39B-209ENST00000428450 PSAPL1Q6NUJ1 521 aa12.86□□□□□ -0.35
DDX39B-209ENST00000428450 B3GNT9Q6UX72 402 aa12.86□□□□□ -0.35
DDX39B-209ENST00000428450 ANO5Q75V66 913 aa12.86□□□□□ -0.35
DDX39B-209ENST00000428450 C12orf50Q8NA57 414 aaPredicted RBP12.86□□□□□ -0.35
DDX39B-209ENST00000428450 SLC5A5Q92911 643 aa12.86□□□□□ -0.35
DDX39B-209ENST00000428450 PAAF1Q9BRP4 392 aa12.86□□□□□ -0.35
DDX39B-209ENST00000428450 TTPALQ9BTX7 342 aa12.86□□□□□ -0.35
DDX39B-209ENST00000428450 BRD9Q9H8M2 597 aa12.86□□□□□ -0.35
DDX39B-209ENST00000428450 ZNF334Q9HCZ1 680 aaPredicted RBP12.86□□□□□ -0.35
DDX39B-209ENST00000428450 TRPV5Q9NQA5 729 aa12.86□□□□□ -0.35
DDX39B-209ENST00000428450 C2orf42Q9NWW7 574 aa12.86□□□□□ -0.35
DDX39B-209ENST00000428450 CACNG4Q9UBN1 327 aa12.86□□□□□ -0.35
DDX39B-209ENST00000428450 GIT1Q9Y2X7 761 aa12.86□□□□□ -0.35
DDX39B-209ENST00000428450 TDRD15B5MCY1 1934 aaKnown RBP12.86□□□□□ -0.35
DDX39B-209ENST00000428450 TMEM8BA6NDV4 472 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 DDX11L8A8MPP1 907 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 GAS7O60861 476 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 TADA2AO75478 443 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 PSMD10O75832 226 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 RHOP08100 348 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 SRGAP2CP0DJJ0 459 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 GSPT1P15170 499 aaKnown RBP12.85□□□□□ -0.35
DDX39B-209ENST00000428450 CEBPBP17676 345 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 SPINK2P20155 84 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 CHMLP26374 656 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 RAP1GAPP47736 663 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 PTGDRQ13258 359 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 PSMD5Q16401 504 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 WDR44Q5JSH3 913 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 PLA2G2CQ5R387 149 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 HEATR6Q6AI08 1181 aaKnown RBP12.85□□□□□ -0.35
DDX39B-209ENST00000428450 CEP68Q76N32 757 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 RDM1Q8NG50 284 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 PRPF31Q8WWY3 499 aaKnown RBP12.85□□□□□ -0.35
DDX39B-209ENST00000428450 GATA6Q92908 595 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 TRMT61BQ9BVS5 477 aaKnown RBP12.85□□□□□ -0.35
DDX39B-209ENST00000428450 ZMYND12Q9H0C1 365 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 AVENQ9NQS1 362 aaPredicted RBP12.85□□□□□ -0.35
DDX39B-209ENST00000428450 RBM28Q9NW13 759 aaKnown RBP12.85□□□□□ -0.35
DDX39B-209ENST00000428450 LHX6Q9UPM6 363 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 RBM8AQ9Y5S9 174 aaKnown RBP12.85□□□□□ -0.35
DDX39B-209ENST00000428450 PIAS3Q9Y6X2 628 aa12.85□□□□□ -0.35
DDX39B-209ENST00000428450 SF3B1O75533 1304 aaKnown RBP eCLIP12.85□□□□□ -0.353e-6■□□□□ 11.3
DDX39B-209ENST00000428450 ESYT2A0FGR8 921 aa12.84□□□□□ -0.35
DDX39B-209ENST00000428450 TAF4O00268 1085 aa12.84□□□□□ -0.35
DDX39B-209ENST00000428450 GIPC1O14908 333 aa12.84□□□□□ -0.35
DDX39B-209ENST00000428450 SGSM2O43147 1006 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms