RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 CHADLQ6NUI6 762 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 JAMLQ86YT9 394 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 CD302Q8IX05 232 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 ZNF280CQ8ND82 737 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 FBXL13Q8NEE6 735 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 FBXO25Q8TCJ0 367 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 POLR3FQ9H1D9 316 aaPredicted RBP12.49□□□□□ -0.41
FIRRE-201ENST00000427391 A1CFQ9NQ94 594 aaKnown RBP12.49□□□□□ -0.41
FIRRE-201ENST00000427391 DAAM1Q9Y4D1 1078 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 ZNFX1Q9P2E3 1918 aaKnown RBP12.49□□□□□ -0.41
FIRRE-201ENST00000427391 SMIM23A6NLE4 172 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 P4HA2O15460 535 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 SHBGP04278 402 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 CFHP08603 1231 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 LSP1P33241 339 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 PEX5P50542 639 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 MFAP3P55082 362 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 CNTN2Q02246 1040 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 KDM7AQ6ZMT4 941 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 MAGOHBQ96A72 148 aaKnown RBP12.49□□□□□ -0.41
FIRRE-201ENST00000427391 NT5C1BQ96P26 610 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 TMEM8AQ9HCN3 771 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 TTC7AQ9ULT0 858 aaPredicted RBP12.49□□□□□ -0.41
FIRRE-201ENST00000427391 PTPRJQ12913 1337 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 WDR81Q562E7 1941 aa12.49□□□□□ -0.41
FIRRE-201ENST00000427391 MYZAPP0CAP1 466 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 IRX3P78415 501 aaPredicted RBP12.48□□□□□ -0.41
FIRRE-201ENST00000427391 DUPD1Q68J44 220 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 SCYL3Q8IZE3 742 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 CPA5Q8WXQ8 436 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 DDX1Q92499 740 aaKnown RBP12.48□□□□□ -0.41
FIRRE-201ENST00000427391 LRRC45Q96CN5 670 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 FMO2Q99518 471 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 ERP44Q9BS26 406 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 JPH1Q9HDC5 661 aaPredicted RBP12.48□□□□□ -0.41
FIRRE-201ENST00000427391 CNOT8Q9UFF9 292 aaKnown RBP12.48□□□□□ -0.41
FIRRE-201ENST00000427391 NDUFAB1O14561 156 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 GRIN3BO60391 1043 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 NLRP11P59045 1033 aaKnown RBP12.48□□□□□ -0.41
FIRRE-201ENST00000427391 TRPM4Q8TD43 1214 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 SEC14L1Q92503 715 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 HAPLN2Q9GZV7 340 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 CYP26B1Q9NR63 512 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 PICK1Q9NRD5 415 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 ZDHHC18Q9NUE0 388 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 CYP39A1Q9NYL5 469 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 SLC9A2Q9UBY0 812 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 NOVA2Q9UNW9 492 aaKnown RBP12.48□□□□□ -0.41
FIRRE-201ENST00000427391 EXOC7Q9UPT5 735 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 GOLGA6L10A6NI86 522 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 EDN1P05305 212 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 HARSP12081 509 aaKnown RBP12.48□□□□□ -0.41
FIRRE-201ENST00000427391 ATP4AP20648 1035 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 RPL21P46778 160 aaKnown RBP12.48□□□□□ -0.41
FIRRE-201ENST00000427391 PDE6CP51160 858 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 KRT71Q3SY84 523 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 C11orf63Q6NUN7 778 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 ZDHHC24Q6UX98 284 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 PASD1Q8IV76 773 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 NSUN6Q8TEA1 469 aaKnown RBP12.48□□□□□ -0.41
FIRRE-201ENST00000427391 MFSD14AQ96MC6 490 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 IWS1Q96ST2 819 aa12.48□□□□□ -0.41
FIRRE-201ENST00000427391 PPANQ9NQ55 473 aaKnown RBP12.48□□□□□ -0.41
FIRRE-201ENST00000427391 GOLGA6L10A0A0M3HER8 536 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 O00370 1275 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 KIAA0391O15091 583 aaKnown RBP12.47□□□□□ -0.41
FIRRE-201ENST00000427391 CLDN3O15551 220 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 DSG3P32926 999 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 PTGIRP43119 386 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 GPC3P51654 580 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 CDR2Q01850 454 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 SNX1Q13596 522 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 SEPT14Q6ZU15 432 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 OTUD6AQ7L8S5 288 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 GPD1LQ8N335 351 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 UBL4BQ8N7F7 174 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 C1orf54Q8WWF1 131 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 CD101Q93033 1021 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 GPRASP2Q96D09 838 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 FAM118BQ9BPY3 351 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 HERPUD2Q9BSE4 406 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 EPB41L4BQ9H329 900 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 R3HDMLQ9H3Y0 253 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 TMEM51Q9NW97 253 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 COQ4Q9Y3A0 265 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 ZNF541Q9H0D2 1346 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 GJB6O95452 261 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 RARAP10276 462 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 SF3A3Q12874 501 aaKnown RBP eCLIP12.47□□□□□ -0.41
FIRRE-201ENST00000427391 ODF2Q5BJF6 829 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 ASAP3Q8TDY4 903 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 KIFAP3Q92845 792 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 ATP6V0A1Q93050 837 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 FBXL18Q96ME1 805 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 PDLIM7Q9NR12 457 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 FAM114A2Q9NRY5 505 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 GRHL1Q9NZI5 618 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 ANKFY1Q9P2R3 1169 aa12.47□□□□□ -0.41
FIRRE-201ENST00000427391 RLFQ13129 1914 aa12.46□□□□□ -0.41
FIRRE-201ENST00000427391 TLDC2A0PJX2 215 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms