RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 BSNDQ8WZ55 320 aa11.3□□□□□ -0.6
HDLBP-213ENST00000427007 STAMQ92783 540 aa11.3□□□□□ -0.6
HDLBP-213ENST00000427007 ZNF707Q96C28 371 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-213ENST00000427007 NT5C3AQ9H0P0 336 aa11.3□□□□□ -0.6
HDLBP-213ENST00000427007 CXCL16Q9H2A7 254 aa11.3□□□□□ -0.6
HDLBP-213ENST00000427007 PDZD7Q9H5P4 517 aa11.3□□□□□ -0.6
HDLBP-213ENST00000427007 POLD4Q9HCU8 107 aa11.3□□□□□ -0.6
HDLBP-213ENST00000427007 TUFT1Q9NNX1 390 aa11.3□□□□□ -0.6
HDLBP-213ENST00000427007 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.3□□□□□ -0.6
HDLBP-213ENST00000427007 PRMT7Q9NVM4 692 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-213ENST00000427007 SNTG2Q9NY99 539 aa11.3□□□□□ -0.6
HDLBP-213ENST00000427007 IGSF9Q9P2J2 1179 aa11.3□□□□□ -0.6
HDLBP-213ENST00000427007 STK25O00506 426 aa11.29□□□□□ -0.6
HDLBP-213ENST00000427007 PTGESO14684 152 aa11.29□□□□□ -0.6
HDLBP-213ENST00000427007 KIF4AO95239 1232 aa11.29□□□□□ -0.6
HDLBP-213ENST00000427007 EDN1P05305 212 aa11.29□□□□□ -0.6
HDLBP-213ENST00000427007 PRKCBP05771 671 aa11.29□□□□□ -0.6
HDLBP-213ENST00000427007 AOC1P19801 751 aa11.29□□□□□ -0.6
HDLBP-213ENST00000427007 TUSC3Q13454 348 aa11.29□□□□□ -0.6
HDLBP-213ENST00000427007 PRPF4BQ13523 1007 aaKnown RBP11.29□□□□□ -0.6
HDLBP-213ENST00000427007 SAFBQ15424 915 aaKnown RBP eCLIP11.29□□□□□ -0.6
HDLBP-213ENST00000427007 ZNF174Q15697 407 aa11.29□□□□□ -0.6
HDLBP-213ENST00000427007 CDCA2Q69YH5 1023 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-213ENST00000427007 PADI6Q6TGC4 694 aa11.29□□□□□ -0.6
HDLBP-213ENST00000427007 CYP26C1Q6V0L0 522 aa11.29□□□□□ -0.6
HDLBP-213ENST00000427007 NOSTRINQ8IVI9 506 aa11.29□□□□□ -0.6
HDLBP-213ENST00000427007 CCDC83Q8IWF9 413 aa11.29□□□□□ -0.6
HDLBP-213ENST00000427007 PRIMPOLQ96LW4 560 aa11.29□□□□□ -0.6
HDLBP-213ENST00000427007 NACC1Q96RE7 527 aa11.29□□□□□ -0.6
HDLBP-213ENST00000427007 FZD8Q9H461 694 aa11.29□□□□□ -0.6
HDLBP-213ENST00000427007 PLEKHA4Q9H4M7 779 aa11.29□□□□□ -0.6
HDLBP-213ENST00000427007 FNIP2Q9P278 1114 aa11.29□□□□□ -0.6
HDLBP-213ENST00000427007 CA14Q9ULX7 337 aa11.29□□□□□ -0.6
HDLBP-213ENST00000427007 SF3B1O75533 1304 aaKnown RBP eCLIP11.29□□□□□ -0.62e-6■■■■■ 134.3
HDLBP-213ENST00000427007 ZMYM2Q9UBW7 1377 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 KRBA1A5PL33 1030 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 ARHGEF35A5YM69 484 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 PROB1E7EW31 1015 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 N4BP3O15049 544 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 RECQL4O94761 1208 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 SEC24BO95487 1268 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 OR52Z1P0C646 297 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 NBL1P41271 181 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 MAPK6Q16659 721 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 FAM187BQ17R55 369 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 FAM171A1Q5VUB5 890 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 EEF1DP3Q658K8 133 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 LILRA6Q6PI73 481 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 FRMD5Q7Z6J6 570 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 SLC44A3Q8N4M1 653 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 ERMNQ8TAM6 284 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 DEPTORQ8TB45 409 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 HDAC7Q8WUI4 952 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 C8orf76Q96K31 380 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 POLR3CQ9BUI4 534 aaPredicted RBP11.28□□□□□ -0.6
HDLBP-213ENST00000427007 KIFC3Q9BVG8 833 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 RHOBTB2Q9BYZ6 727 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 PRKD2Q9BZL6 878 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 C2orf40Q9H1Z8 148 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 ZDHHC7Q9NXF8 308 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 EPS15L1Q9UBC2 864 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 GDAQ9Y2T3 454 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 VWA8A3KMH1 1905 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 DMDP11532 3685 aa11.28□□□□□ -0.6
HDLBP-213ENST00000427007 PRR23AA6NEV1 266 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 ZMYND10O75800 440 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 THP07101 528 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 CYP11B2P19099 503 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 RFX1P22670 979 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 RPA1P27694 616 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 NAMPTP43490 491 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 NTHL1P78549 312 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 CREMQ03060 361 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 NBR1Q14596 966 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 NAB2Q15742 525 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 PSMD5Q16401 504 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 ECM1Q16610 540 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 GLRA4Q5JXX5 417 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 GRASPQ7Z6J2 395 aaPredicted RBP11.27□□□□□ -0.61
HDLBP-213ENST00000427007 CCDC105Q8IYK2 499 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 LNX1Q8TBB1 728 aaPredicted RBP11.27□□□□□ -0.61
HDLBP-213ENST00000427007 GPR152Q8TDT2 470 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 RTP3Q9BQQ7 232 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 CLSTN3Q9BQT9 956 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 ADPGKQ9BRR6 497 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 TTPALQ9BTX7 342 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 CCDC113Q9H0I3 377 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 PPP4R2Q9NY27 417 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 FBXW11Q9UKB1 542 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 DOCK8Q8NF50 2099 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 MYH15Q9Y2K3 1946 aa11.27□□□□□ -0.61
HDLBP-213ENST00000427007 ACKR2O00590 384 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 CCL16O15467 120 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 ADAM12O43184 909 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 PAPLNO95428 1278 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 C1RP00736 705 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 C8AP07357 584 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 SRFP11831 508 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 LAMP2P13473 410 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 FSHRP23945 695 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms