RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 TRIM33Q9UPN9 1127 aa17.08■□□□□ 0.33
PKP4-205ENST00000426248 CETPP11597 493 aa17.08■□□□□ 0.32
PKP4-205ENST00000426248 KRT13P13646 458 aa17.08■□□□□ 0.32
PKP4-205ENST00000426248 SERPINB4P48594 390 aa17.08■□□□□ 0.32
PKP4-205ENST00000426248 ZNF844Q08AG5 666 aa17.08■□□□□ 0.32
PKP4-205ENST00000426248 EPHA7Q15375 998 aa17.08■□□□□ 0.32
PKP4-205ENST00000426248 ZNF449Q6P9G9 518 aa17.08■□□□□ 0.32
PKP4-205ENST00000426248 GDAP1Q8TB36 358 aa17.08■□□□□ 0.32
PKP4-205ENST00000426248 AFG3L2Q9Y4W6 797 aa17.08■□□□□ 0.32
PKP4-205ENST00000426248 NR2F2P24468 414 aa17.08■□□□□ 0.32
PKP4-205ENST00000426248 ALDH3A1P30838 453 aa17.08■□□□□ 0.32
PKP4-205ENST00000426248 TAF1CQ15572 869 aaPredicted RBP17.08■□□□□ 0.32
PKP4-205ENST00000426248 DENND2CQ68D51 928 aa17.08■□□□□ 0.32
PKP4-205ENST00000426248 ZNF365Q70YC5 407 aa17.08■□□□□ 0.32
PKP4-205ENST00000426248 VTI1AQ96AJ9 217 aa17.08■□□□□ 0.32
PKP4-205ENST00000426248 DDX27Q96GQ7 796 aaKnown RBP17.08■□□□□ 0.32
PKP4-205ENST00000426248 CNOT10Q9H9A5 744 aaKnown RBP17.08■□□□□ 0.32
PKP4-205ENST00000426248 UTP11Q9Y3A2 253 aaKnown RBP17.08■□□□□ 0.32
PKP4-205ENST00000426248 PPFIA2O75334 1257 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 NPEPPSP55786 919 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 KRT76Q01546 638 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 DEUP1Q05D60 604 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 PGM5Q15124 567 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 KBTBD4Q9NVX7 518 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 COL20A1Q9P218 1284 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 FRMD4BQ9Y2L6 1034 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 LRRIQ4A6NIV6 560 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 PSAPP07602 524 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 GHRP10912 638 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 MRPS35P82673 323 aaKnown RBP17.07■□□□□ 0.32
PKP4-205ENST00000426248 NAALADL2Q58DX5 795 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 PLA2G4FQ68DD2 849 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 NUDCD1Q96RS6 583 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 JPH1Q9HDC5 661 aaPredicted RBP17.07■□□□□ 0.32
PKP4-205ENST00000426248 A0A1B0GUL6 1792 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 PEX3P56589 373 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 SETDB1Q15047 1291 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 ZNF668Q96K58 619 aaPredicted RBP17.07■□□□□ 0.32
PKP4-205ENST00000426248 REEP2Q9BRK0 252 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 GOLPH3Q9H4A6 298 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 LMCD1Q9NZU5 365 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 TSKSQ9UJT2 592 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 PCDHA10Q9Y5I2 948 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 UTRNP46939 3433 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 PITPNM2Q9BZ72 1349 aa17.07■□□□□ 0.32
PKP4-205ENST00000426248 PDHXO00330 501 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 CALUO43852 315 aaPredicted RBP17.06■□□□□ 0.32
PKP4-205ENST00000426248 ITGB5P18084 799 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 RAPGEF1Q13905 1077 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 RCN2Q14257 317 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 KIAA0753Q2KHM9 967 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 RNF168Q8IYW5 571 aaPredicted RBP17.06■□□□□ 0.32
PKP4-205ENST00000426248 CHST13Q8NET6 341 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 RPS6KL1Q9Y6S9 549 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 PVALEFA0A1B0GWK0 134 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 TBC1D25Q3MII6 688 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 MOXD1Q6UVY6 613 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 GPRC5AQ8NFJ5 357 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 MAIP1Q8WWC4 291 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 PCIF1Q9H4Z3 704 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 KLHL14Q9P2G3 628 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 SLC9A2Q9UBY0 812 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 TIAM2Q8IVF5 1701 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 RSPH10B2B2RC85 870 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 SHBGP04278 402 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 KRT16P08779 473 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 RSPH10BP0C881 870 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 DRD4P21917 467 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 ERFP50548 548 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 Q4G0T1 1027 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 RAB3IPQ96QF0 476 aaPredicted RBP17.06■□□□□ 0.32
PKP4-205ENST00000426248 PPP1R16BQ96T49 567 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 DNAJC7Q99615 494 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 C7orf25Q9BPX7 421 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 MMTAG2Q9BU76 263 aaKnown RBP17.06■□□□□ 0.32
PKP4-205ENST00000426248 SLC5A4Q9NY91 659 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 ANKRD33BA6NCL7 494 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 ANKRD40Q6AI12 368 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 MIPOL1Q8TD10 442 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 MOV10L1Q9BXT6 1211 aaKnown RBP17.06■□□□□ 0.32
PKP4-205ENST00000426248 RMI1Q9H9A7 625 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 AMACRQ9UHK6 382 aa17.06■□□□□ 0.32
PKP4-205ENST00000426248 TMEM150BA6NC51 233 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 GGPS1O95749 300 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 NMT1P30419 496 aaKnown RBP17.05■□□□□ 0.32
PKP4-205ENST00000426248 CLK2P49760 499 aaKnown RBP17.05■□□□□ 0.32
PKP4-205ENST00000426248 FKBP3Q00688 224 aaKnown RBP17.05■□□□□ 0.32
PKP4-205ENST00000426248 DYNC1I2Q13409 638 aaKnown RBP17.05■□□□□ 0.32
PKP4-205ENST00000426248 NT5DC1Q5TFE4 455 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 RIT2Q99578 217 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 BLOC1S4Q9NUP1 217 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 FGFR1OP2Q9NVK5 253 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 FAM237AA0A1B0GTK4 181 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 PIK3CDO00329 1044 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 EYA4O95677 639 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 SLC7A3Q8WY07 619 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 RNF8O76064 485 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 RHOBTB3O94955 611 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 JAK3P52333 1124 aa17.05■□□□□ 0.32
PKP4-205ENST00000426248 CETN1Q12798 172 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms