RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 IFT122Q9HBG6 1241 aa15.6■□□□□ 0.09
CDK3-201ENST00000425876 PTPRHQ9HD43 1115 aa15.6■□□□□ 0.09
CDK3-201ENST00000425876 UBE2TQ9NPD8 197 aaPredicted RBP15.6■□□□□ 0.09
CDK3-201ENST00000425876 RBAKQ9NYW8 714 aaPredicted RBP15.6■□□□□ 0.09
CDK3-201ENST00000425876 ADAMTS1Q9UHI8 967 aa15.6■□□□□ 0.09
CDK3-201ENST00000425876 A0A087X0T9 212 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 CTAGE9A4FU28 777 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 DYNC1I1O14576 645 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 URI1O94763 535 aaPredicted RBP15.59■□□□□ 0.09
CDK3-201ENST00000425876 FAM228BP0C875 321 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 ACOT2P49753 483 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 AP3M2P53677 418 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 CDC42EP1Q00587 391 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 PRPF4BQ13523 1007 aaKnown RBP15.59■□□□□ 0.09
CDK3-201ENST00000425876 KIF22Q14807 665 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 SURF1Q15526 300 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 MARCH8Q5T0T0 291 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 MPZL3Q6UWV2 235 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 ENOSF1Q7L5Y1 443 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 SEMA4DQ92854 862 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 NT5C1BQ96P26 610 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 MAP7D2Q96T17 732 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 CGRRF1Q99675 332 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 TOPORSQ9NS56 1045 aaPredicted RBP15.59■□□□□ 0.09
CDK3-201ENST00000425876 TRIM10Q9UDY6 481 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 NENFQ9UMX5 172 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 TNFSF13BQ9Y275 285 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 NRCAMQ92823 1304 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 CNTNAP2Q9UHC6 1331 aa15.59■□□□□ 0.09
CDK3-201ENST00000425876 TTLL13PA6NNM8 815 aa15.58■□□□□ 0.09
CDK3-201ENST00000425876 INO80B-WBP1J3KQ70 363 aa15.58■□□□□ 0.09
CDK3-201ENST00000425876 SLU7O95391 586 aaKnown RBP15.58■□□□□ 0.09
CDK3-201ENST00000425876 C4BPAP04003 597 aaKnown RBP15.58■□□□□ 0.09
CDK3-201ENST00000425876 GJB1P08034 283 aa15.58■□□□□ 0.09
CDK3-201ENST00000425876 CTGFP29279 349 aa15.58■□□□□ 0.09
CDK3-201ENST00000425876 MFAP3P55082 362 aa15.58■□□□□ 0.09
CDK3-201ENST00000425876 POU5F1Q01860 360 aaKnown RBP15.58■□□□□ 0.09
CDK3-201ENST00000425876 ATF7IP2Q5U623 682 aa15.58■□□□□ 0.09
CDK3-201ENST00000425876 ZNF410Q86VK4 478 aa15.58■□□□□ 0.09
CDK3-201ENST00000425876 ARHGEF19Q8IW93 802 aa15.58■□□□□ 0.09
CDK3-201ENST00000425876 RNF10Q8N5U6 811 aaKnown RBP15.58■□□□□ 0.09
CDK3-201ENST00000425876 TAS1R2Q8TE23 839 aa15.58■□□□□ 0.09
CDK3-201ENST00000425876 ZNF516Q92618 1163 aa15.58■□□□□ 0.09
CDK3-201ENST00000425876 SECISBP2LQ93073 1101 aaKnown RBP15.58■□□□□ 0.09
CDK3-201ENST00000425876 NAPGQ99747 312 aaPredicted RBP15.58■□□□□ 0.09
CDK3-201ENST00000425876 SYT11Q9BT88 431 aa15.58■□□□□ 0.09
CDK3-201ENST00000425876 TCHPQ9BT92 498 aa15.58■□□□□ 0.09
CDK3-201ENST00000425876 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.58■□□□□ 0.09
CDK3-201ENST00000425876 INO80BQ9C086 356 aaPredicted RBP15.58■□□□□ 0.09
CDK3-201ENST00000425876 AP5M1Q9H0R1 490 aa15.58■□□□□ 0.09
CDK3-201ENST00000425876 TSKSQ9UJT2 592 aa15.58■□□□□ 0.09
CDK3-201ENST00000425876 AKT3Q9Y243 479 aa15.58■□□□□ 0.09
CDK3-201ENST00000425876 ZSWIM8A7E2V4 1837 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 EVPLQ92817 2033 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 BTNL10A8MVZ5 291 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 HAS3O00219 553 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 FOXN3O00409 490 aaPredicted RBP15.58■□□□□ 0.08
CDK3-201ENST00000425876 ZEB2O60315 1214 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 AKR1A1P14550 325 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 TNNI1P19237 187 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 GCNT1Q02742 428 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 NAB2Q15742 525 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 ARHGAP44Q17R89 818 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 SMYD5Q6GMV2 418 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 GPIHBP1Q8IV16 184 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 KIAA0319LQ8IZA0 1049 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 TRIM58Q8NG06 486 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 HELQQ8TDG4 1101 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 SHC3Q92529 594 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 KAT2BQ92831 832 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 ZBTB10Q96DT7 871 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 MINDY3Q9H8M7 445 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 PDE11AQ9HCR9 933 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 NAGPAQ9UK23 515 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 INTUQ9ULD6 942 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 MRFAP1Q9Y605 127 aa15.58■□□□□ 0.08
CDK3-201ENST00000425876 A0A087WZ62 844 aa15.57■□□□□ 0.08
CDK3-201ENST00000425876 ANO9A1A5B4 782 aa15.57■□□□□ 0.08
CDK3-201ENST00000425876 MBLAC1A4D2B0 266 aaPredicted RBP15.57■□□□□ 0.08
CDK3-201ENST00000425876 PSMC4P43686 418 aa15.57■□□□□ 0.08
CDK3-201ENST00000425876 LACTBP83111 547 aaPredicted RBP15.57■□□□□ 0.08
CDK3-201ENST00000425876 ENOX2Q16206 610 aaKnown RBP15.57■□□□□ 0.08
CDK3-201ENST00000425876 AMHR2Q16671 573 aa15.57■□□□□ 0.08
CDK3-201ENST00000425876 ZBTB41Q5SVQ8 909 aa15.57■□□□□ 0.08
CDK3-201ENST00000425876 SRGAP1Q7Z6B7 1085 aa15.57■□□□□ 0.08
CDK3-201ENST00000425876 FAM71AQ8IYT1 594 aa15.57■□□□□ 0.08
CDK3-201ENST00000425876 SLC30A5Q8TAD4 765 aa15.57■□□□□ 0.08
CDK3-201ENST00000425876 ERO1AQ96HE7 468 aa15.57■□□□□ 0.08
CDK3-201ENST00000425876 FDXACB1Q9BRP7 624 aaPredicted RBP15.57■□□□□ 0.08
CDK3-201ENST00000425876 CPSF3Q9UKF6 684 aaKnown RBP15.57■□□□□ 0.08
CDK3-201ENST00000425876 TFR2Q9UP52 801 aa15.57■□□□□ 0.08
CDK3-201ENST00000425876 DUSP10Q9Y6W6 482 aa15.57■□□□□ 0.08
CDK3-201ENST00000425876 MGAMO43451 1857 aa15.56■□□□□ 0.08
CDK3-201ENST00000425876 DDX3XO00571 662 aaKnown RBP eCLIP15.56■□□□□ 0.08
CDK3-201ENST00000425876 KPNA6O60684 536 aa15.56■□□□□ 0.08
CDK3-201ENST00000425876 DUSP11O75319 330 aaKnown RBP15.56■□□□□ 0.08
CDK3-201ENST00000425876 LRRN2O75325 713 aa15.56■□□□□ 0.08
CDK3-201ENST00000425876 TACC1O75410 805 aa15.56■□□□□ 0.08
CDK3-201ENST00000425876 ECM2O94769 699 aaPredicted RBP15.56■□□□□ 0.08
CDK3-201ENST00000425876 PNMA6AP0CW24 399 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms