RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 PARP2Q9UGN5 583 aa26.26■■□□□ 1.79
APOE-202ENST00000425718 INSL6Q9Y581 213 aa26.26■■□□□ 1.79
APOE-202ENST00000425718 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.25■■□□□ 1.79
APOE-202ENST00000425718 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.25■■□□□ 1.79
APOE-202ENST00000425718 ATF7P17544 494 aaPredicted RBP26.25■■□□□ 1.79
APOE-202ENST00000425718 ERCC5P28715 1186 aaPredicted RBP26.25■■□□□ 1.79
APOE-202ENST00000425718 ADSSP30520 456 aa26.25■■□□□ 1.79
APOE-202ENST00000425718 SURF1Q15526 300 aa26.25■■□□□ 1.79
APOE-202ENST00000425718 HERC6Q8IVU3 1022 aa26.25■■□□□ 1.79
APOE-202ENST00000425718 CRIPAKQ8N1N5 446 aa26.25■■□□□ 1.79
APOE-202ENST00000425718 NELFBQ8WX92 580 aa26.25■■□□□ 1.79
APOE-202ENST00000425718 RPS6KC1Q96S38 1066 aa26.25■■□□□ 1.79
APOE-202ENST00000425718 NAT10Q9H0A0 1025 aaKnown RBP26.25■■□□□ 1.79
APOE-202ENST00000425718 PRO3102Q9H379 93 aa26.25■■□□□ 1.79
APOE-202ENST00000425718 SNTG2Q9NY99 539 aa26.25■■□□□ 1.79
APOE-202ENST00000425718 FRMD4BQ9Y2L6 1034 aa26.25■■□□□ 1.79
APOE-202ENST00000425718 ANK1P16157 1881 aa26.24■■□□□ 1.79
APOE-202ENST00000425718 CETN3O15182 167 aa26.24■■□□□ 1.79
APOE-202ENST00000425718 UPP2O95045 317 aa26.24■■□□□ 1.79
APOE-202ENST00000425718 NR3C1P04150 777 aa26.24■■□□□ 1.79
APOE-202ENST00000425718 FKBP3Q00688 224 aaKnown RBP26.24■■□□□ 1.79
APOE-202ENST00000425718 ZCWPW2Q504Y3 356 aa26.24■■□□□ 1.79
APOE-202ENST00000425718 KLHL10Q6JEL2 608 aa26.24■■□□□ 1.79
APOE-202ENST00000425718 USP37Q86T82 979 aa26.24■■□□□ 1.79
APOE-202ENST00000425718 YME1L1Q96TA2 773 aa26.24■■□□□ 1.79
APOE-202ENST00000425718 RAD9AQ99638 391 aa26.24■■□□□ 1.79
APOE-202ENST00000425718 CBWD1Q9BRT8 395 aa26.24■■□□□ 1.79
APOE-202ENST00000425718 RWDD2AQ9UIY3 292 aa26.24■■□□□ 1.79
APOE-202ENST00000425718 GBF1Q92538 1859 aa26.23■■□□□ 1.79
APOE-202ENST00000425718 COL4A6Q14031 1691 aa26.23■■□□□ 1.79
APOE-202ENST00000425718 ZNF233A6NK53 670 aa26.23■■□□□ 1.79
APOE-202ENST00000425718 CLIC2O15247 247 aa26.23■■□□□ 1.79
APOE-202ENST00000425718 MAPK13O15264 365 aa26.23■■□□□ 1.79
APOE-202ENST00000425718 INPPL1O15357 1258 aa26.23■■□□□ 1.79
APOE-202ENST00000425718 EXOC3O60645 756 aa26.23■■□□□ 1.79
APOE-202ENST00000425718 DGKIO75912 1065 aa26.23■■□□□ 1.79
APOE-202ENST00000425718 RECQL4O94761 1208 aa26.23■■□□□ 1.79
APOE-202ENST00000425718 IL18RAPO95256 599 aa26.23■■□□□ 1.79
APOE-202ENST00000425718 IBSPP21815 317 aaPredicted RBP26.23■■□□□ 1.79
APOE-202ENST00000425718 AGMOQ6ZNB7 445 aa26.23■■□□□ 1.79
APOE-202ENST00000425718 CMTR2Q8IYT2 770 aaKnown RBP26.23■■□□□ 1.79
APOE-202ENST00000425718 FBXL18Q96ME1 805 aa26.23■■□□□ 1.79
APOE-202ENST00000425718 ANP32EQ9BTT0 268 aa26.23■■□□□ 1.79
APOE-202ENST00000425718 APOL6Q9BWW8 343 aa26.23■■□□□ 1.79
APOE-202ENST00000425718 SEMA6BQ9H3T3 888 aa26.23■■□□□ 1.79
APOE-202ENST00000425718 DMAC2Q9NW81 257 aa26.23■■□□□ 1.79
APOE-202ENST00000425718 PCDH10Q9P2E7 1040 aa26.23■■□□□ 1.79
APOE-202ENST00000425718 CPSF3Q9UKF6 684 aaKnown RBP26.23■■□□□ 1.79
APOE-202ENST00000425718 CTNND2Q9UQB3 1225 aa26.23■■□□□ 1.79
APOE-202ENST00000425718 TISP43B9A030 160 aa26.22■■□□□ 1.79
APOE-202ENST00000425718 XPOTO43592 962 aaKnown RBP26.22■■□□□ 1.79
APOE-202ENST00000425718 CAVIN2O95810 425 aa26.22■■□□□ 1.79
APOE-202ENST00000425718 NR2F2P24468 414 aa26.22■■□□□ 1.79
APOE-202ENST00000425718 CYP2J2P51589 502 aa26.22■■□□□ 1.79
APOE-202ENST00000425718 PPP2R3AQ06190 1150 aa26.22■■□□□ 1.79
APOE-202ENST00000425718 ADAM9Q13443 819 aa26.22■■□□□ 1.79
APOE-202ENST00000425718 RAB30Q15771 203 aa26.22■■□□□ 1.79
APOE-202ENST00000425718 MKNK1Q9BUB5 465 aa26.22■■□□□ 1.79
APOE-202ENST00000425718 HAPLN2Q9GZV7 340 aa26.22■■□□□ 1.79
APOE-202ENST00000425718 PCIF1Q9H4Z3 704 aa26.22■■□□□ 1.79
APOE-202ENST00000425718 HES2Q9Y543 173 aa26.22■■□□□ 1.79
APOE-202ENST00000425718 TLL1O43897 1013 aa26.21■■□□□ 1.79
APOE-202ENST00000425718 FAM189A1O60320 539 aa26.21■■□□□ 1.79
APOE-202ENST00000425718 CD44P16070 742 aaKnown RBP26.21■■□□□ 1.79
APOE-202ENST00000425718 HTRA4P83105 476 aaPredicted RBP26.21■■□□□ 1.79
APOE-202ENST00000425718 TYRO3Q06418 890 aa26.21■■□□□ 1.79
APOE-202ENST00000425718 DPCR1Q3MIW9 517 aa26.21■■□□□ 1.79
APOE-202ENST00000425718 ZSCAN23Q3MJ62 389 aa26.21■■□□□ 1.79
APOE-202ENST00000425718 NOMO2Q5JPE7 1267 aa26.21■■□□□ 1.79
APOE-202ENST00000425718 NT5DC4Q86YG4 428 aa26.21■■□□□ 1.79
APOE-202ENST00000425718 CEP63Q96MT8 703 aa26.21■■□□□ 1.79
APOE-202ENST00000425718 FAM213AQ9BRX8 229 aa26.21■■□□□ 1.79
APOE-202ENST00000425718 ASB7Q9H672 318 aa26.21■■□□□ 1.79
APOE-202ENST00000425718 PCDHA11Q9Y5I1 949 aa26.21■■□□□ 1.79
APOE-202ENST00000425718 OFD1O75665 1012 aa26.2■■□□□ 1.78
APOE-202ENST00000425718 OSTNP61366 133 aa26.2■■□□□ 1.78
APOE-202ENST00000425718 ENPEPQ07075 957 aa26.2■■□□□ 1.78
APOE-202ENST00000425718 TPD52L1Q16890 204 aaPredicted RBP26.2■■□□□ 1.78
APOE-202ENST00000425718 ANKRD40Q6AI12 368 aa26.2■■□□□ 1.78
APOE-202ENST00000425718 BRSK2Q8IWQ3 736 aa26.2■■□□□ 1.78
APOE-202ENST00000425718 LRRC43Q8N309 656 aa26.2■■□□□ 1.78
APOE-202ENST00000425718 LPPQ93052 612 aa26.2■■□□□ 1.78
APOE-202ENST00000425718 ZNF689Q96CS4 500 aaPredicted RBP26.2■■□□□ 1.78
APOE-202ENST00000425718 SNX27Q96L92 541 aa26.2■■□□□ 1.78
APOE-202ENST00000425718 IKZF4Q9H2S9 585 aa26.2■■□□□ 1.78
APOE-202ENST00000425718 SLC38A7Q9NVC3 462 aa26.2■■□□□ 1.78
APOE-202ENST00000425718 MSRAQ9UJ68 235 aa26.2■■□□□ 1.78
APOE-202ENST00000425718 DERAQ9Y315 318 aa26.2■■□□□ 1.78
APOE-202ENST00000425718 SYCE3A1L190 88 aa26.19■■□□□ 1.78
APOE-202ENST00000425718 ARL5CA6NH57 179 aa26.19■■□□□ 1.78
APOE-202ENST00000425718 GNA14O95837 355 aa26.19■■□□□ 1.78
APOE-202ENST00000425718 ADRB2P07550 413 aa26.19■■□□□ 1.78
APOE-202ENST00000425718 EPB41P11171 864 aaKnown RBP26.19■■□□□ 1.78
APOE-202ENST00000425718 AKAP5P24588 427 aa26.19■■□□□ 1.78
APOE-202ENST00000425718 PSMC2P35998 433 aaKnown RBP26.19■■□□□ 1.78
APOE-202ENST00000425718 ACOT2P49753 483 aa26.19■■□□□ 1.78
APOE-202ENST00000425718 GRIK3Q13003 919 aa26.19■■□□□ 1.78
APOE-202ENST00000425718 SNRNP35Q16560 246 aaKnown RBP26.19■■□□□ 1.78
APOE-202ENST00000425718 CEP120Q8N960 986 aa26.19■■□□□ 1.78
APOE-202ENST00000425718 HELQQ8TDG4 1101 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms