RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 DEFB103AP81534 67 aa17.03■□□□□ 0.32
SHOX2-202ENST00000425436 PRPF4BQ13523 1007 aaKnown RBP17.03■□□□□ 0.32
SHOX2-202ENST00000425436 DSC3Q14574 896 aa17.03■□□□□ 0.32
SHOX2-202ENST00000425436 TSR1Q2NL82 804 aaKnown RBP17.03■□□□□ 0.32
SHOX2-202ENST00000425436 ZNF720Q7Z2F6 126 aa17.03■□□□□ 0.32
SHOX2-202ENST00000425436 GLIS3Q8NEA6 775 aa17.03■□□□□ 0.32
SHOX2-202ENST00000425436 ZNF507Q8TCN5 953 aa17.03■□□□□ 0.32
SHOX2-202ENST00000425436 CNOT6LQ96LI5 555 aaKnown RBP17.03■□□□□ 0.32
SHOX2-202ENST00000425436 FTHL17Q9BXU8 183 aa17.03■□□□□ 0.32
SHOX2-202ENST00000425436 TMEM134Q9H6X4 195 aa17.03■□□□□ 0.32
SHOX2-202ENST00000425436 SEL1LQ9UBV2 794 aa17.03■□□□□ 0.32
SHOX2-202ENST00000425436 ACKR2O00590 384 aa17.02■□□□□ 0.32
SHOX2-202ENST00000425436 MFAP3LO75121 409 aa17.02■□□□□ 0.32
SHOX2-202ENST00000425436 BAIAP3O94812 1187 aa17.02■□□□□ 0.32
SHOX2-202ENST00000425436 MYBP10242 640 aa17.02■□□□□ 0.32
SHOX2-202ENST00000425436 CASP5P51878 434 aa17.02■□□□□ 0.32
SHOX2-202ENST00000425436 ADKP55263 362 aaKnown RBP17.02■□□□□ 0.32
SHOX2-202ENST00000425436 NCBP1Q09161 790 aaKnown RBP17.02■□□□□ 0.32
SHOX2-202ENST00000425436 TMEM132AQ24JP5 1023 aa17.02■□□□□ 0.32
SHOX2-202ENST00000425436 EDRF1Q3B7T1 1238 aa17.02■□□□□ 0.32
SHOX2-202ENST00000425436 E4F1Q66K89 784 aaPredicted RBP17.02■□□□□ 0.32
SHOX2-202ENST00000425436 FAM117BQ6P1L5 589 aa17.02■□□□□ 0.32
SHOX2-202ENST00000425436 TDHQ8IZJ6 230 aa17.02■□□□□ 0.32
SHOX2-202ENST00000425436 TSPYL2Q9H2G4 693 aaPredicted RBP17.02■□□□□ 0.32
SHOX2-202ENST00000425436 RGS18Q9NS28 235 aa17.02■□□□□ 0.32
SHOX2-202ENST00000425436 SLC4A7Q9Y6M7 1214 aa17.02■□□□□ 0.32
SHOX2-202ENST00000425436 UPP2O95045 317 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 GCNT3O95395 438 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 STRN3Q13033 797 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 FAM187BQ17R55 369 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 RASIP1Q5U651 963 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 TWF2Q6IBS0 349 aaKnown RBP17.01■□□□□ 0.31
SHOX2-202ENST00000425436 NYAP1Q6ZVC0 841 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 STXBP4Q6ZWJ1 553 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 TMTC1Q8IUR5 882 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 TMEM139Q8IV31 216 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 TARS2Q9BW92 718 aaKnown RBP17.01■□□□□ 0.31
SHOX2-202ENST00000425436 CHST12Q9NRB3 414 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 OLFML3Q9NRN5 406 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 TBX20Q9UMR3 447 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 PTPRSQ13332 1948 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 LAMA3Q16787 3333 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 PHLPP2Q6ZVD8 1323 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 GRXCR1A8MXD5 290 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 PES1O00541 588 aaKnown RBP17.01■□□□□ 0.31
SHOX2-202ENST00000425436 FECHP22830 423 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 GTF2BQ00403 316 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 KCNA1Q09470 495 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 PCBP1Q15365 356 aaKnown RBP eCLIP17.01■□□□□ 0.31
SHOX2-202ENST00000425436 MAN2A1Q16706 1144 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 ZCWPW2Q504Y3 356 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 FIGNQ5HY92 759 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 CEP135Q66GS9 1140 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 FAM109BQ6ICB4 259 aaPredicted RBP17.01■□□□□ 0.31
SHOX2-202ENST00000425436 C16orf45Q96MC5 204 aaPredicted RBP17.01■□□□□ 0.31
SHOX2-202ENST00000425436 ERGIC2Q96RQ1 377 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 IKZF4Q9H2S9 585 aa17.01■□□□□ 0.31
SHOX2-202ENST00000425436 CNTNAP2Q9UHC6 1331 aa17■□□□□ 0.31
SHOX2-202ENST00000425436 A0A1B0GUA9 196 aa17■□□□□ 0.31
SHOX2-202ENST00000425436 C9IYK1 514 aa17■□□□□ 0.31
SHOX2-202ENST00000425436 H0YCG3 227 aa17■□□□□ 0.31
SHOX2-202ENST00000425436 CALUO43852 315 aaPredicted RBP17■□□□□ 0.31
SHOX2-202ENST00000425436 EFCAB14O75071 495 aa17■□□□□ 0.31
SHOX2-202ENST00000425436 PRPF6O94906 941 aaKnown RBP17■□□□□ 0.31
SHOX2-202ENST00000425436 AMHP03971 560 aa17■□□□□ 0.31
SHOX2-202ENST00000425436 GYPCP04921 128 aa17■□□□□ 0.31
SHOX2-202ENST00000425436 AXLP30530 894 aa17■□□□□ 0.31
SHOX2-202ENST00000425436 CASP14P31944 242 aa17■□□□□ 0.31
SHOX2-202ENST00000425436 BMT2Q1RMZ1 405 aa17■□□□□ 0.31
SHOX2-202ENST00000425436 VWA3BQ502W6 1294 aa17■□□□□ 0.31
SHOX2-202ENST00000425436 UBXN11Q5T124 520 aa17■□□□□ 0.31
SHOX2-202ENST00000425436 EEF1DP3Q658K8 133 aa17■□□□□ 0.31
SHOX2-202ENST00000425436 NOTUMQ6P988 496 aa17■□□□□ 0.31
SHOX2-202ENST00000425436 SLC24A5Q71RS6 500 aa17■□□□□ 0.31
SHOX2-202ENST00000425436 ZNF397Q8NF99 534 aaPredicted RBP17■□□□□ 0.31
SHOX2-202ENST00000425436 STRA6Q9BX79 667 aa17■□□□□ 0.31
SHOX2-202ENST00000425436 EIF2AQ9BY44 585 aaKnown RBP17■□□□□ 0.31
SHOX2-202ENST00000425436 MRPL4Q9BYD3 311 aaKnown RBP17■□□□□ 0.31
SHOX2-202ENST00000425436 MTIF3Q9H2K0 278 aaKnown RBP17■□□□□ 0.31
SHOX2-202ENST00000425436 TRMT1Q9NXH9 659 aaKnown RBP17■□□□□ 0.31
SHOX2-202ENST00000425436 CAPN11Q9UMQ6 739 aa17■□□□□ 0.31
SHOX2-202ENST00000425436 LUC7L2Q9Y383 392 aaKnown RBP17■□□□□ 0.31
SHOX2-202ENST00000425436 TTC3P53804 2025 aa16.99■□□□□ 0.31
SHOX2-202ENST00000425436 CETN3O15182 167 aa16.99■□□□□ 0.31
SHOX2-202ENST00000425436 EIF3DO15371 548 aaKnown RBP eCLIP16.99■□□□□ 0.31
SHOX2-202ENST00000425436 ATP2A2P16615 1042 aaKnown RBP16.99■□□□□ 0.31
SHOX2-202ENST00000425436 RPL13P26373 211 aaKnown RBP16.99■□□□□ 0.31
SHOX2-202ENST00000425436 MARSP56192 900 aaKnown RBP16.99■□□□□ 0.31
SHOX2-202ENST00000425436 KNOP1Q1ED39 458 aaKnown RBP16.99■□□□□ 0.31
SHOX2-202ENST00000425436 ATF7IP2Q5U623 682 aa16.99■□□□□ 0.31
SHOX2-202ENST00000425436 CYP26C1Q6V0L0 522 aa16.99■□□□□ 0.31
SHOX2-202ENST00000425436 ZC3H3Q8IXZ2 948 aaKnown RBP16.99■□□□□ 0.31
SHOX2-202ENST00000425436 RNF169Q8NCN4 708 aa16.99■□□□□ 0.31
SHOX2-202ENST00000425436 OR8K1Q8NGG5 319 aa16.99■□□□□ 0.31
SHOX2-202ENST00000425436 KIF18AQ8NI77 898 aa16.99■□□□□ 0.31
SHOX2-202ENST00000425436 CPLX3Q8WVH0 158 aa16.99■□□□□ 0.31
SHOX2-202ENST00000425436 SCFD1Q8WVM8 642 aa16.99■□□□□ 0.31
SHOX2-202ENST00000425436 BICD1Q96G01 975 aa16.99■□□□□ 0.31
SHOX2-202ENST00000425436 ZBTB45Q96K62 511 aaPredicted RBP16.99■□□□□ 0.31
SHOX2-202ENST00000425436 PPP1R13BQ96KQ4 1090 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms