RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 C12orf42Q96LP6 360 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 RSPH14Q9UHP6 348 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 SNCAIPQ9Y6H5 919 aa12.44□□□□□ -0.42
UBR4-207ENST00000425413 TCRBV7S2A1N4TA0A589 114 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 TTLL13PA6NNM8 815 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 MAFGO15525 162 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 OPA1O60313 960 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 NNTQ13423 1086 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 TTLL12Q14166 644 aaPredicted RBP12.43□□□□□ -0.42
UBR4-207ENST00000425413 LY6KQ17RY6 165 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 CEP85LQ5SZL2 805 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 ZBTB33Q86T24 672 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 C10orf67Q8IYJ2 551 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 SAMD3Q8N6K7 520 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 RDM1Q8NG50 284 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 ZNF564Q8TBZ8 553 aaPredicted RBP12.43□□□□□ -0.42
UBR4-207ENST00000425413 PIK3R5Q8WYR1 880 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 CDHR1Q96JP9 859 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 NTPCRQ9BSD7 190 aaKnown RBP12.43□□□□□ -0.42
UBR4-207ENST00000425413 HAPLN2Q9GZV7 340 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 ISCUQ9H1K1 167 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 BCCIPQ9P287 314 aaKnown RBP eCLIP12.43□□□□□ -0.42
UBR4-207ENST00000425413 FBXO40Q9UH90 709 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 PNMA2Q9UL42 364 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 TRPC6Q9Y210 931 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 K7ERI5 159 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 OATP04181 439 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 EDN1P05305 212 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 UBA1P22314 1058 aaKnown RBP12.43□□□□□ -0.42
UBR4-207ENST00000425413 GLRA2P23416 452 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 TNFRSF8P28908 595 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 ECHS1P30084 290 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 NF2P35240 595 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 OAZ1P54368 228 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 LRRC31Q6UY01 552 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 RHOT2Q8IXI1 618 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 RASGEF1CQ8N431 466 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 SLC7A3Q8WY07 619 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 C18orf8Q96DM3 657 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 MFSD14AQ96MC6 490 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 SENP7Q9BQF6 1050 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 AGO2Q9UKV8 859 aaKnown RBP12.43□□□□□ -0.42
UBR4-207ENST00000425413 PTPN22Q9Y2R2 807 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 SSC5DA1L4H1 1573 aa12.43□□□□□ -0.42
UBR4-207ENST00000425413 COL11A1P12107 1806 aaPredicted RBP12.43□□□□□ -0.42
UBR4-207ENST00000425413 CES2O00748 559 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 IRF6O14896 467 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 HPDP32754 393 aaPredicted RBP12.42□□□□□ -0.42
UBR4-207ENST00000425413 PIK3CAP42336 1068 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 BRDTQ58F21 947 aaPredicted RBP12.42□□□□□ -0.42
UBR4-207ENST00000425413 ALS2CLQ60I27 953 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 CDR2LQ86X02 465 aaPredicted RBP12.42□□□□□ -0.42
UBR4-207ENST00000425413 CCDC26Q8TAB7 109 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 RUBCNQ92622 972 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 TCHPQ9BT92 498 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 PDLIM7Q9NR12 457 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 C1orf112Q9NSG2 853 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 ARHGAP28Q9P2N2 729 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 CD2APQ9Y5K6 639 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 SYNGAP1Q96PV0 1343 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 TRIM66O15016 1216 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 DKC1O60832 514 aaKnown RBP eCLIP12.42□□□□□ -0.42
UBR4-207ENST00000425413 HLA-DRAP01903 254 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 CFHP08603 1231 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 SRGAP2CP0DJJ0 459 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 ALDH5A1P51649 535 aaPredicted RBP12.42□□□□□ -0.42
UBR4-207ENST00000425413 GPC3P51654 580 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 PDCLQ13371 301 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 FMNL3Q8IVF7 1028 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 IQCKQ8N0W5 287 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 LRRC71Q8N4P6 559 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 SLC17A8Q8NDX2 589 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 CALR3Q96L12 384 aaKnown RBP12.42□□□□□ -0.42
UBR4-207ENST00000425413 CNOT8Q9UFF9 292 aaKnown RBP12.42□□□□□ -0.42
UBR4-207ENST00000425413 SNX24Q9Y343 169 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 UTP11Q9Y3A2 253 aaKnown RBP12.42□□□□□ -0.42
UBR4-207ENST00000425413 CSADQ9Y600 493 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 CCDC188H7C350 402 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 ZEB2O60315 1214 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 PYGMP11217 842 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 GJC1P36383 396 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 HSD17B3P37058 310 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 IRX3P78415 501 aaPredicted RBP12.42□□□□□ -0.42
UBR4-207ENST00000425413 CDR2Q01850 454 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 PPFIA1Q13136 1202 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 TDRD10Q5VZ19 366 aaKnown RBP12.42□□□□□ -0.42
UBR4-207ENST00000425413 MSTO1Q9BUK6 570 aa12.42□□□□□ -0.42
UBR4-207ENST00000425413 UMODL1Q5DID0 1318 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 KIAA1217Q5T5P2 1943 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 SOWAHBA6NEL2 793 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 GGPS1O95749 300 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 GJB1P08034 283 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 CTNNA1P35221 906 aaKnown RBP12.41□□□□□ -0.42
UBR4-207ENST00000425413 KCNJ1P48048 391 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 GNGT1P63211 74 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 DR1Q01658 176 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 TMEM63BQ5T3F8 832 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 ZDHHC14Q8IZN3 488 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 UBL4BQ8N7F7 174 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 UHMK1Q8TAS1 419 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms