RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 DEKP35659 375 aaKnown RBP11.22□□□□□ -0.61
MDC1-205ENST00000425072 ACOT2P49753 483 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 FXR1P51114 621 aaKnown RBP eCLIP11.22□□□□□ -0.61
MDC1-205ENST00000425072 CYP24A1Q07973 514 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 RBL2Q08999 1139 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 MGAT3Q09327 533 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 NFX1Q12986 1120 aaKnown RBP11.22□□□□□ -0.61
MDC1-205ENST00000425072 PSMD6Q15008 389 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 TRIM71Q2Q1W2 868 aaKnown RBP11.22□□□□□ -0.61
MDC1-205ENST00000425072 MIIPQ5JXC2 388 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 GBP6Q6ZN66 633 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 PPFIBP1Q86W92 1011 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 CBWD2Q8IUF1 395 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 VSTM4Q8IW00 320 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 FAM126BQ8IXS8 530 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 THNSL1Q8IYQ7 743 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 HACE1Q8IYU2 909 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 CACTINQ8WUQ7 758 aaKnown RBP11.22□□□□□ -0.61
MDC1-205ENST00000425072 SLC35C1Q96A29 364 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 PCMTD1Q96MG8 357 aaPredicted RBP11.22□□□□□ -0.61
MDC1-205ENST00000425072 ERGIC2Q96RQ1 377 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 CCDC94Q9BW85 323 aaPredicted RBP11.22□□□□□ -0.61
MDC1-205ENST00000425072 EDEM3Q9BZQ6 932 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 TRIM6Q9C030 488 aaPredicted RBP11.22□□□□□ -0.61
MDC1-205ENST00000425072 PDZD7Q9H5P4 517 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 PLEKHA5Q9HAU0 1116 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 AGPAT5Q9NUQ2 364 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 CPSF3Q9UKF6 684 aaKnown RBP11.22□□□□□ -0.61
MDC1-205ENST00000425072 ST3GAL5Q9UNP4 418 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 NOC2LQ9Y3T9 749 aaKnown RBP11.22□□□□□ -0.61
MDC1-205ENST00000425072 SIP14410 1827 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 MKI67P46013 3256 aaKnown RBP11.21□□□□□ -0.61
MDC1-205ENST00000425072 ITIH6Q6UXX5 1313 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 TULP1O00294 542 aaPredicted RBP11.21□□□□□ -0.61
MDC1-205ENST00000425072 B4GALT5O43286 388 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 PTMAP06454 111 aaKnown RBP11.21□□□□□ -0.61
MDC1-205ENST00000425072 SELPP16109 830 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 TNNI1P19237 187 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 YARSP54577 528 aaKnown RBP11.21□□□□□ -0.61
MDC1-205ENST00000425072 GSDMDP57764 484 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 CLDN10P78369 228 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 PAK2Q13177 524 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 TRIM14Q14142 442 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 TSR1Q2NL82 804 aaKnown RBP11.21□□□□□ -0.61
MDC1-205ENST00000425072 DCAF17Q5H9S7 520 aaPredicted RBP11.21□□□□□ -0.61
MDC1-205ENST00000425072 FBXO47Q5MNV8 452 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 ZNF618Q5T7W0 954 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 CRELD2Q6UXH1 353 aaPredicted RBP11.21□□□□□ -0.61
MDC1-205ENST00000425072 NT5DC4Q86YG4 428 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 ZNF397Q8NF99 534 aaPredicted RBP11.21□□□□□ -0.61
MDC1-205ENST00000425072 CCDC127Q96BQ5 260 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 CPB2Q96IY4 423 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 CDT1Q9H211 546 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 ASB7Q9H672 318 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 RBAKQ9NYW8 714 aaPredicted RBP11.21□□□□□ -0.61
MDC1-205ENST00000425072 PADI3Q9ULW8 664 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 USP20Q9Y2K6 914 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 DAAM1Q9Y4D1 1078 aa11.21□□□□□ -0.61
MDC1-205ENST00000425072 TTLL13PA6NNM8 815 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 ABLIM1O14639 778 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 NRDCO43847 1150 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 PQBP1O60828 265 aaKnown RBP11.2□□□□□ -0.62
MDC1-205ENST00000425072 EDN1P05305 212 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 CTSHP09668 335 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 STAG3L1P0CL83 205 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 HARSP12081 509 aaKnown RBP11.2□□□□□ -0.62
MDC1-205ENST00000425072 FGFR4P22455 802 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 PBX1P40424 430 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 GRM5P41594 1212 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 FMO5P49326 533 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 MNX1P50219 401 aaPredicted RBP11.2□□□□□ -0.62
MDC1-205ENST00000425072 ATN1P54259 1190 aaPredicted RBP11.2□□□□□ -0.62
MDC1-205ENST00000425072 TLE2Q04725 743 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 EXOC3L4Q17RC7 722 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 DUOXA2Q1HG44 320 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 FIGNQ5HY92 759 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 EEF1DP3Q658K8 133 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 KRT39Q6A163 491 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 TWF2Q6IBS0 349 aaKnown RBP11.2□□□□□ -0.62
MDC1-205ENST00000425072 TMC6Q7Z403 805 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 FAM228AQ86W67 206 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 BRSK2Q8IWQ3 736 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 EHBP1Q8NDI1 1231 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 TMEM40Q8WWA1 233 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 DHX38Q92620 1227 aaKnown RBP11.2□□□□□ -0.62
MDC1-205ENST00000425072 PAWRQ96IZ0 340 aaKnown RBP11.2□□□□□ -0.62
MDC1-205ENST00000425072 FAM81BQ96LP2 452 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 TRAIPQ9BWF2 469 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 FTHL17Q9BXU8 183 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 HAPLN2Q9GZV7 340 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 MMRN2Q9H8L6 949 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 UBN1Q9NPG3 1134 aa11.2□□□□□ -0.62
MDC1-205ENST00000425072 TOPORSQ9NS56 1045 aaPredicted RBP11.2□□□□□ -0.62
MDC1-205ENST00000425072 PIN4Q9Y237 131 aaKnown RBP11.2□□□□□ -0.62
MDC1-205ENST00000425072 R3HCC1Q9Y3T6 440 aaKnown RBP11.2□□□□□ -0.62
MDC1-205ENST00000425072 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.2□□□□□ -0.62
MDC1-205ENST00000425072 KIAA0100Q14667 2235 aaKnown RBP11.19□□□□□ -0.62
MDC1-205ENST00000425072 ZNF623O75123 536 aa11.19□□□□□ -0.62
MDC1-205ENST00000425072 NPTXRO95502 500 aa11.19□□□□□ -0.62
MDC1-205ENST00000425072 DLATP10515 647 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms