RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 PTGESO14684 152 aa14.35□□□□□ -0.11
VRK3-203ENST00000424804 PI15O43692 258 aa14.35□□□□□ -0.11
VRK3-203ENST00000424804 C1RP00736 705 aa14.35□□□□□ -0.11
VRK3-203ENST00000424804 URODP06132 367 aa14.35□□□□□ -0.11
VRK3-203ENST00000424804 OR52Z1P0C646 297 aa14.35□□□□□ -0.11
VRK3-203ENST00000424804 SPATA31D3P0C874 917 aa14.35□□□□□ -0.11
VRK3-203ENST00000424804 MYBP10242 640 aa14.35□□□□□ -0.11
VRK3-203ENST00000424804 FUT10Q6P4F1 479 aa14.35□□□□□ -0.11
VRK3-203ENST00000424804 SPATA31D4Q6ZUB0 917 aa14.35□□□□□ -0.11
VRK3-203ENST00000424804 MAEAQ7L5Y9 396 aa14.35□□□□□ -0.11
VRK3-203ENST00000424804 TMEM87AQ8NBN3 555 aa14.35□□□□□ -0.11
VRK3-203ENST00000424804 MYADMQ96S97 322 aa14.35□□□□□ -0.11
VRK3-203ENST00000424804 CCDC113Q9H0I3 377 aa14.35□□□□□ -0.11
VRK3-203ENST00000424804 WDR6Q9NNW5 1121 aaKnown RBP14.35□□□□□ -0.11
VRK3-203ENST00000424804 FNIP2Q9P278 1114 aa14.35□□□□□ -0.11
VRK3-203ENST00000424804 NOTCH4Q99466 2003 aa14.35□□□□□ -0.11
VRK3-203ENST00000424804 PROB1E7EW31 1015 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 TGM5O43548 720 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 U2AF2P26368 475 aaKnown RBP eCLIP14.34□□□□□ -0.11
VRK3-203ENST00000424804 RPA1P27694 616 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 TDGQ13569 410 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 RTP2Q5QGT7 225 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 EEF1DP3Q658K8 133 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 ASTLQ6HA08 431 aaPredicted RBP14.34□□□□□ -0.11
VRK3-203ENST00000424804 CD300LGQ6UXG3 332 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 CCDC149Q6ZUS6 474 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 OTOP3Q7RTS5 596 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 HDAC7Q8WUI4 952 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 RSAD2Q8WXG1 361 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 PRIMPOLQ96LW4 560 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 COLEC11Q9BWP8 271 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 NT5C3AQ9H0P0 336 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 PDZD7Q9H5P4 517 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 POLD4Q9HCU8 107 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 ADAM28Q9UKQ2 775 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 SSX2IPQ9Y2D8 614 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 PCDHB6Q9Y5E3 794 aa14.34□□□□□ -0.11
VRK3-203ENST00000424804 K7ELQ4 463 aaPredicted RBP14.33□□□□□ -0.12
VRK3-203ENST00000424804 NARSO43776 548 aaKnown RBP14.33□□□□□ -0.12
VRK3-203ENST00000424804 GLUD1P00367 558 aa14.33□□□□□ -0.12
VRK3-203ENST00000424804 ADH1AP07327 375 aa14.33□□□□□ -0.12
VRK3-203ENST00000424804 RPL17P18621 184 aaKnown RBP14.33□□□□□ -0.12
VRK3-203ENST00000424804 CYP11B2P19099 503 aa14.33□□□□□ -0.12
VRK3-203ENST00000424804 TRAPPC10P48553 1259 aa14.33□□□□□ -0.12
VRK3-203ENST00000424804 CLCN5P51795 746 aa14.33□□□□□ -0.12
VRK3-203ENST00000424804 GRIK3Q13003 919 aa14.33□□□□□ -0.12
VRK3-203ENST00000424804 CYP26C1Q6V0L0 522 aa14.33□□□□□ -0.12
VRK3-203ENST00000424804 PALB2Q86YC2 1186 aa14.33□□□□□ -0.12
VRK3-203ENST00000424804 ACSF2Q96CM8 615 aaPredicted RBP14.33□□□□□ -0.12
VRK3-203ENST00000424804 NACC1Q96RE7 527 aa14.33□□□□□ -0.12
VRK3-203ENST00000424804 PRMT7Q9NVM4 692 aaPredicted RBP14.33□□□□□ -0.12
VRK3-203ENST00000424804 SNTG2Q9NY99 539 aa14.33□□□□□ -0.12
VRK3-203ENST00000424804 EPS15L1Q9UBC2 864 aa14.33□□□□□ -0.12
VRK3-203ENST00000424804 PARP2Q9UGN5 583 aa14.33□□□□□ -0.12
VRK3-203ENST00000424804 DUSP12Q9UNI6 340 aa14.33□□□□□ -0.12
VRK3-203ENST00000424804 FAM186AA6NE01 2351 aa14.33□□□□□ -0.12
VRK3-203ENST00000424804 LRRIQ4A6NIV6 560 aa14.32□□□□□ -0.12
VRK3-203ENST00000424804 ADAM12O43184 909 aa14.32□□□□□ -0.12
VRK3-203ENST00000424804 TOB1P50616 345 aaPredicted RBP14.32□□□□□ -0.12
VRK3-203ENST00000424804 NCBP1Q09161 790 aaKnown RBP14.32□□□□□ -0.12
VRK3-203ENST00000424804 PTGDRQ13258 359 aa14.32□□□□□ -0.12
VRK3-203ENST00000424804 ORC2Q13416 577 aaPredicted RBP14.32□□□□□ -0.12
VRK3-203ENST00000424804 CUL4AQ13619 759 aa14.32□□□□□ -0.12
VRK3-203ENST00000424804 USP41Q3LFD5 358 aa14.32□□□□□ -0.12
VRK3-203ENST00000424804 NT5DC1Q5TFE4 455 aa14.32□□□□□ -0.12
VRK3-203ENST00000424804 PADI6Q6TGC4 694 aa14.32□□□□□ -0.12
VRK3-203ENST00000424804 PRSS55Q6UWB4 352 aaPredicted RBP14.32□□□□□ -0.12
VRK3-203ENST00000424804 HSCBQ8IWL3 235 aa14.32□□□□□ -0.12
VRK3-203ENST00000424804 MCPH1Q8NEM0 835 aa14.32□□□□□ -0.12
VRK3-203ENST00000424804 ERMNQ8TAM6 284 aa14.32□□□□□ -0.12
VRK3-203ENST00000424804 LNX1Q8TBB1 728 aaPredicted RBP14.32□□□□□ -0.12
VRK3-203ENST00000424804 RIN2Q8WYP3 895 aaPredicted RBP14.32□□□□□ -0.12
VRK3-203ENST00000424804 CLSTN3Q9BQT9 956 aa14.32□□□□□ -0.12
VRK3-203ENST00000424804 TRIM6Q9C030 488 aaPredicted RBP14.32□□□□□ -0.12
VRK3-203ENST00000424804 PLEKHA4Q9H4M7 779 aa14.32□□□□□ -0.12
VRK3-203ENST00000424804 SPTBN4Q9H254 2564 aa14.32□□□□□ -0.12
VRK3-203ENST00000424804 CLUHO75153 1309 aa14.32□□□□□ -0.12
VRK3-203ENST00000424804 KRBA1A5PL33 1030 aa14.31□□□□□ -0.12
VRK3-203ENST00000424804 ACKR2O00590 384 aa14.31□□□□□ -0.12
VRK3-203ENST00000424804 KIF4AO95239 1232 aa14.31□□□□□ -0.12
VRK3-203ENST00000424804 HSP90AA1P07900 732 aaKnown RBP14.31□□□□□ -0.12
VRK3-203ENST00000424804 TUSC3Q13454 348 aa14.31□□□□□ -0.12
VRK3-203ENST00000424804 HSP90AA2PQ14568 343 aaPredicted RBP14.31□□□□□ -0.12
VRK3-203ENST00000424804 ASCL5Q7RTU5 278 aa14.31□□□□□ -0.12
VRK3-203ENST00000424804 SLC44A3Q8N4M1 653 aa14.31□□□□□ -0.12
VRK3-203ENST00000424804 SMG7Q92540 1137 aaKnown RBP14.31□□□□□ -0.12
VRK3-203ENST00000424804 ATOH1Q92858 354 aaPredicted RBP14.31□□□□□ -0.12
VRK3-203ENST00000424804 PRKD2Q9BZL6 878 aa14.31□□□□□ -0.12
VRK3-203ENST00000424804 IGSF9Q9P2J2 1179 aa14.31□□□□□ -0.12
VRK3-203ENST00000424804 WDR87Q6ZQQ6 2873 aa14.31□□□□□ -0.12
VRK3-203ENST00000424804 CASTOR2A6NHX0 329 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 ANHXE9PGG2 379 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 ZMYND10O75800 440 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 RECQL4O94761 1208 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 PRKCBP05771 671 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 AOC1P19801 751 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 PDCP20941 246 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 NBL1P41271 181 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 NAMPTP43490 491 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 FXR2P51116 673 aaKnown RBP eCLIP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms