RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 DKC1O60832 514 aaKnown RBP eCLIP4.23□□□□□ -1.73
SF3B1-205ENST00000424674 INMTO95050 263 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 NAT1P18440 290 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 GRK2P25098 689 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 IL6STP40189 918 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-205ENST00000424674 STAT1P42224 750 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 COPAP53621 1224 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 CACNB3P54284 484 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 DSG1Q02413 1049 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 MTA1Q13330 715 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 LSAMPQ13449 338 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 ZNF827Q17R98 1081 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 KIAA0753Q2KHM9 967 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 DNAJC21Q5F1R6 531 aaKnown RBP4.23□□□□□ -1.73
SF3B1-205ENST00000424674 EMC4Q5J8M3 183 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 MFSD4BQ5TF39 518 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 ZNF449Q6P9G9 518 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 KCNT2Q6UVM3 1135 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 CCDC73Q6ZRK6 1079 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 USP53Q70EK8 1073 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 MAMDC2Q7Z304 686 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-205ENST00000424674 PTRH1Q86Y79 214 aaKnown RBP4.23□□□□□ -1.73
SF3B1-205ENST00000424674 KRT78Q8N1N4 520 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 TTLL6Q8N841 843 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 ZBTB34Q8NCN2 500 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 SMC1BQ8NDV3 1235 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 ZFPM2Q8WW38 1151 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 CENPIQ92674 756 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-205ENST00000424674 PTPRN2Q92932 1015 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 C1orf159Q96HA4 380 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 HIC2Q96JB3 615 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 ZSCAN31Q96LW9 406 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-205ENST00000424674 BARD1Q99728 777 aaKnown RBP4.23□□□□□ -1.73
SF3B1-205ENST00000424674 CHCHD6Q9BRQ6 235 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 NUP62CLQ9H1M0 184 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 CERS4Q9HA82 394 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 EMC7Q9NPA0 242 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 UBN1Q9NPG3 1134 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 WASH6PQ9NQA3 447 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 GPRC5BQ9NZH0 403 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 NFKBIL1Q9UBC1 381 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-205ENST00000424674 CFDP1Q9UEE9 299 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-205ENST00000424674 XPO7Q9UIA9 1087 aaKnown RBP4.23□□□□□ -1.73
SF3B1-205ENST00000424674 SLC13A4Q9UKG4 626 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 PADI4Q9UM07 663 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 ZKSCAN5Q9Y2L8 839 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 RRP7AQ9Y3A4 280 aaKnown RBP4.23□□□□□ -1.73
SF3B1-205ENST00000424674 PCDHB4Q9Y5E5 795 aa4.23□□□□□ -1.73
SF3B1-205ENST00000424674 A0A087WV62 115 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 TCRBV16S1A1N1A0A5B0 115 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 FSD2A1L4K1 749 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 TSPY2A6NKD2 308 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 ZNF891A8MT65 544 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-205ENST00000424674 HGSO14964 777 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-205ENST00000424674 IRAK2O43187 625 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 FRS3O43559 492 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 ZBED4O75132 1171 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 CAPNS1P04632 268 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 DHRS4L1P0CG22 281 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 TSPY3P0CV98 308 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 TSPY8P0CW00 308 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 MYCLP12524 364 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-205ENST00000424674 ATF7P17544 494 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-205ENST00000424674 PAPOLAP51003 745 aaKnown RBP4.22□□□□□ -1.73
SF3B1-205ENST00000424674 ARL4CP56559 192 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 NKX3-2P78367 333 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 TSPY1Q01534 308 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 GRM1Q13255 1194 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 TRIM29Q14134 588 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 SPARCL1Q14515 664 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 ODF1Q14990 250 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 CR1LQ2VPA4 569 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 FAM26FQ5R3K3 315 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 PRR31Q5SQ13 230 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 SLC35F1Q5T1Q4 408 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 PGBD2Q6P3X8 592 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 HHIPL2Q6UWX4 724 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 STK32CQ86UX6 486 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 MSANTD4Q8NCY6 345 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 DIS3LQ8TF46 1054 aaKnown RBP4.22□□□□□ -1.73
SF3B1-205ENST00000424674 OSBP2Q969R2 916 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 SH3KBP1Q96B97 665 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 ARL8AQ96BM9 186 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 SCLYQ96I15 445 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 CFAP53Q96M91 514 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 TIGD1Q96MW7 591 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 NT5C1BQ96P26 610 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 MPHOSPH8Q99549 860 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 ACO2Q99798 780 aaKnown RBP4.22□□□□□ -1.73
SF3B1-205ENST00000424674 BAG1Q99933 345 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-205ENST00000424674 CCDC68Q9H2F9 335 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 TMEM60Q9H2L4 133 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 ELAC1Q9H777 363 aaKnown RBP4.22□□□□□ -1.73
SF3B1-205ENST00000424674 ZWILCHQ9H900 591 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 ZCCHC17Q9NP64 241 aaKnown RBP4.22□□□□□ -1.73
SF3B1-205ENST00000424674 ZNF277Q9NRM2 450 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-205ENST00000424674 ATP8A2Q9NTI2 1148 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 PDRG1Q9NUG6 133 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 MRGBPQ9NV56 204 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 C14orf119Q9NWQ9 140 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms