RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 TRIM60Q495X7 471 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 FAM26DQ5JW98 314 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 FAM102BQ5T8I3 360 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 UNC13DQ70J99 1090 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 SRGAP1Q7Z6B7 1085 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 GAS2L3Q86XJ1 694 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 ZBTB8OSQ8IWT0 167 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 KIAA0319LQ8IZA0 1049 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 TRIML1Q8N9V2 468 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 TRAPPC12Q8WVT3 735 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 HVCN1Q96D96 273 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 REEP2Q9BRK0 252 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 RUSC1Q9BVN2 902 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 POLR3FQ9H1D9 316 aaPredicted RBP7.74□□□□□ -1.17
EPHA4-206ENST00000424339 NUP62CLQ9H1M0 184 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 HIPK3Q9H422 1215 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 ST6GALNAC4Q9H4F1 302 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 SUGCTQ9HAC7 445 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 XPNPEP1Q9NQW7 623 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 TRMT13Q9NUP7 481 aaKnown RBP7.74□□□□□ -1.17
EPHA4-206ENST00000424339 SUCLA2Q9P2R7 463 aaPredicted RBP7.74□□□□□ -1.17
EPHA4-206ENST00000424339 SERTAD1Q9UHV2 236 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 TBX21Q9UL17 535 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 AKT3Q9Y243 479 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 ATP11BQ9Y2G3 1177 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 NR2E3Q9Y5X4 410 aa7.74□□□□□ -1.17
EPHA4-206ENST00000424339 ZBBXA8MT70 800 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 LETM1O95202 739 aaPredicted RBP7.73□□□□□ -1.17
EPHA4-206ENST00000424339 CKBP12277 381 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 IDEP14735 1019 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 SELPP16109 830 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 SFPQP23246 707 aaKnown RBP eCLIP7.73□□□□□ -1.17
EPHA4-206ENST00000424339 THPOP40225 353 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 AFMP43652 599 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 GPC3P51654 580 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 CLCN3P51790 818 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 CRYBB1P53674 252 aaPredicted RBP7.73□□□□□ -1.17
EPHA4-206ENST00000424339 SOX10P56693 466 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 NCBP1Q09161 790 aaKnown RBP7.73□□□□□ -1.17
EPHA4-206ENST00000424339 FAAP100Q0VG06 881 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 LAMTOR4Q0VGL1 99 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 DPYDQ12882 1025 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 MAPK7Q13164 816 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 GIT2Q14161 759 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 DHX8Q14562 1220 aaKnown RBP7.73□□□□□ -1.17
EPHA4-206ENST00000424339 HSP90AA2PQ14568 343 aaPredicted RBP7.73□□□□□ -1.17
EPHA4-206ENST00000424339 ARSHQ5FYA8 562 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 NKAPLQ5M9Q1 402 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 NT5DC1Q5TFE4 455 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 APBB1IPQ7Z5R6 666 aaPredicted RBP7.73□□□□□ -1.17
EPHA4-206ENST00000424339 RHPN2Q8IUC4 686 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 FAM178BQ8IXR5 827 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 LRRC71Q8N4P6 559 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 SPATA20Q8TB22 786 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 DEPTORQ8TB45 409 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 LRRC15Q8TF66 581 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 DNAJB3Q8WWF6 145 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 PRPF31Q8WWY3 499 aaKnown RBP7.73□□□□□ -1.17
EPHA4-206ENST00000424339 SMARCE1Q969G3 411 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 TMEM143Q96AN5 459 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 DNAJC19Q96DA6 116 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 PRIMPOLQ96LW4 560 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 SCLT1Q96NL6 688 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 CTAGE1Q96RT6 745 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 NOC4LQ9BVI4 516 aaKnown RBP7.73□□□□□ -1.17
EPHA4-206ENST00000424339 KRTAP9-9Q9BYP9 154 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 KRTAP9-4Q9BYQ2 154 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 CELF4Q9BZC1 486 aaKnown RBP7.73□□□□□ -1.17
EPHA4-206ENST00000424339 GCOM2Q9BZD3 368 aaPredicted RBP7.73□□□□□ -1.17
EPHA4-206ENST00000424339 FAM49AQ9H0Q0 323 aaPredicted RBP7.73□□□□□ -1.17
EPHA4-206ENST00000424339 TRPV6Q9H1D0 765 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 CLSTN2Q9H4D0 955 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 TMEM39AQ9NV64 488 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 EXOC1Q9NV70 894 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 PANK4Q9NVE7 773 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 PCDHB11Q9Y5F2 797 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 TRPV2Q9Y5S1 764 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 UBE4BO95155 1302 aa7.73□□□□□ -1.17
EPHA4-206ENST00000424339 TANC1Q9C0D5 1861 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 LRRIQ4A6NIV6 560 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 RSPH10B2B2RC85 870 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 GPR182O15218 404 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 EIF3DO15371 548 aaKnown RBP eCLIP7.72□□□□□ -1.17
EPHA4-206ENST00000424339 EFCAB14O75071 495 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 RHOBTB3O94955 611 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 TIMP1P01033 207 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 RPN1P04843 607 aaKnown RBP7.72□□□□□ -1.17
EPHA4-206ENST00000424339 RSPH10BP0C881 870 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 GLRA2P23416 452 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 EIF4BP23588 611 aaKnown RBP7.72□□□□□ -1.17
EPHA4-206ENST00000424339 AXLP30530 894 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 NPTX2P47972 431 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 NLRP11P59045 1033 aaKnown RBP7.72□□□□□ -1.17
EPHA4-206ENST00000424339 PTENP60484 403 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 ZNF200P98182 395 aaPredicted RBP7.72□□□□□ -1.17
EPHA4-206ENST00000424339 MAPK6Q16659 721 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 FAM187BQ17R55 369 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 TRIM71Q2Q1W2 868 aaKnown RBP7.72□□□□□ -1.17
EPHA4-206ENST00000424339 HERC4Q5GLZ8 1057 aaPredicted RBP7.72□□□□□ -1.17
EPHA4-206ENST00000424339 FAM26FQ5R3K3 315 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms