RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 LDHAP00338 332 aaKnown RBP17.86■□□□□ 0.45
CMTM3-202ENST00000424011 KIF22Q14807 665 aa17.86■□□□□ 0.45
CMTM3-202ENST00000424011 ARHGAP44Q17R89 818 aa17.86■□□□□ 0.45
CMTM3-202ENST00000424011 HSDL1Q3SXM5 330 aa17.86■□□□□ 0.45
CMTM3-202ENST00000424011 IER5Q5VY09 327 aa17.86■□□□□ 0.45
CMTM3-202ENST00000424011 HDXQ7Z353 690 aa17.86■□□□□ 0.45
CMTM3-202ENST00000424011 SAPCD2Q86UD0 394 aa17.86■□□□□ 0.45
CMTM3-202ENST00000424011 MSL3Q8N5Y2 521 aaKnown RBP17.86■□□□□ 0.45
CMTM3-202ENST00000424011 ATP8B4Q8TF62 1192 aa17.86■□□□□ 0.45
CMTM3-202ENST00000424011 SMARCAD1Q9H4L7 1026 aa17.86■□□□□ 0.45
CMTM3-202ENST00000424011 PASKQ96RG2 1323 aa17.85■□□□□ 0.45
CMTM3-202ENST00000424011 TARSL2A2RTX5 802 aaKnown RBP17.85■□□□□ 0.45
CMTM3-202ENST00000424011 LRRIQ3A6PVS8 624 aaPredicted RBP17.85■□□□□ 0.45
CMTM3-202ENST00000424011 EFNA5P52803 228 aa17.85■□□□□ 0.45
CMTM3-202ENST00000424011 FAM213AQ9BRX8 229 aa17.85■□□□□ 0.45
CMTM3-202ENST00000424011 NENFQ9UMX5 172 aa17.85■□□□□ 0.45
CMTM3-202ENST00000424011 DIS3Q9Y2L1 958 aaKnown RBP17.85■□□□□ 0.45
CMTM3-202ENST00000424011 PCDHGC5Q9Y5F6 944 aa17.85■□□□□ 0.45
CMTM3-202ENST00000424011 IVNS1ABPQ9Y6Y0 642 aa17.85■□□□□ 0.45
CMTM3-202ENST00000424011 ZMYND10O75800 440 aa17.84■□□□□ 0.45
CMTM3-202ENST00000424011 FTCDO95954 541 aa17.84■□□□□ 0.45
CMTM3-202ENST00000424011 H2AFZP0C0S5 128 aa17.84■□□□□ 0.45
CMTM3-202ENST00000424011 GPC3P51654 580 aa17.84■□□□□ 0.45
CMTM3-202ENST00000424011 ZNF157P51786 506 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-202ENST00000424011 MFAP3P55082 362 aa17.84■□□□□ 0.45
CMTM3-202ENST00000424011 MAP2K1Q02750 393 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-202ENST00000424011 MXD4Q14582 209 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-202ENST00000424011 H2AFVQ71UI9 128 aa17.84■□□□□ 0.45
CMTM3-202ENST00000424011 ARMCX2Q7L311 632 aa17.84■□□□□ 0.45
CMTM3-202ENST00000424011 FBXL13Q8NEE6 735 aa17.84■□□□□ 0.45
CMTM3-202ENST00000424011 SPATA4Q8NEY3 305 aa17.84■□□□□ 0.45
CMTM3-202ENST00000424011 FAM81BQ96LP2 452 aa17.84■□□□□ 0.45
CMTM3-202ENST00000424011 BCCIPQ9P287 314 aaKnown RBP eCLIP17.84■□□□□ 0.45
CMTM3-202ENST00000424011 MORF4L1Q9UBU8 362 aa17.84■□□□□ 0.45
CMTM3-202ENST00000424011 MYH9P35579 1960 aaKnown RBP17.84■□□□□ 0.45
CMTM3-202ENST00000424011 A0A0A6YYK5 440 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-202ENST00000424011 DDX3XO00571 662 aaKnown RBP eCLIP17.84■□□□□ 0.452e-10■■■□□ 18.2
CMTM3-202ENST00000424011 ADCY3O60266 1144 aa17.84■□□□□ 0.45
CMTM3-202ENST00000424011 ZNF792Q3KQV3 632 aa17.84■□□□□ 0.45
CMTM3-202ENST00000424011 MMGT1Q8N4V1 131 aa17.84■□□□□ 0.45
CMTM3-202ENST00000424011 SLC30A5Q8TAD4 765 aa17.84■□□□□ 0.45
CMTM3-202ENST00000424011 PSPC1Q8WXF1 523 aaKnown RBP17.84■□□□□ 0.45
CMTM3-202ENST00000424011 PDE11AQ9HCR9 933 aa17.84■□□□□ 0.45
CMTM3-202ENST00000424011 VTA1Q9NP79 307 aa17.84■□□□□ 0.45
CMTM3-202ENST00000424011 AGO2Q9UKV8 859 aaKnown RBP17.84■□□□□ 0.45
CMTM3-202ENST00000424011 GRID2IPA4D2P6 1211 aa17.83■□□□□ 0.45
CMTM3-202ENST00000424011 FOXN3O00409 490 aaPredicted RBP17.83■□□□□ 0.45
CMTM3-202ENST00000424011 TNFAIP3P21580 790 aa17.83■□□□□ 0.45
CMTM3-202ENST00000424011 ITIH3Q06033 890 aa17.83■□□□□ 0.45
CMTM3-202ENST00000424011 ZNF467Q7Z7K2 595 aaPredicted RBP17.83■□□□□ 0.45
CMTM3-202ENST00000424011 RASAL3Q86YV0 1011 aa17.83■□□□□ 0.45
CMTM3-202ENST00000424011 LMBR1Q8WVP7 490 aa17.83■□□□□ 0.45
CMTM3-202ENST00000424011 GPBP1L1Q9HC44 474 aaPredicted RBP17.83■□□□□ 0.45
CMTM3-202ENST00000424011 MED4Q9NPJ6 270 aa17.83■□□□□ 0.45
CMTM3-202ENST00000424011 RAB20Q9NX57 234 aa17.83■□□□□ 0.45
CMTM3-202ENST00000424011 TRPM7Q96QT4 1865 aa17.83■□□□□ 0.44
CMTM3-202ENST00000424011 ZC3H11AO75152 810 aaKnown RBP eCLIP17.83■□□□□ 0.44
CMTM3-202ENST00000424011 ADORA2AP29274 412 aa17.83■□□□□ 0.44
CMTM3-202ENST00000424011 LAMC2Q13753 1193 aa17.83■□□□□ 0.44
CMTM3-202ENST00000424011 CASP8Q14790 479 aa17.83■□□□□ 0.44
CMTM3-202ENST00000424011 PSMD6Q15008 389 aa17.83■□□□□ 0.44
CMTM3-202ENST00000424011 MEI1Q5TIA1 1274 aa17.83■□□□□ 0.44
CMTM3-202ENST00000424011 CCDC181Q5TID7 509 aa17.83■□□□□ 0.44
CMTM3-202ENST00000424011 TADA2BQ86TJ2 420 aa17.83■□□□□ 0.44
CMTM3-202ENST00000424011 ARHGEF19Q8IW93 802 aa17.83■□□□□ 0.44
CMTM3-202ENST00000424011 U2AF1L4Q8WU68 220 aaKnown RBP17.83■□□□□ 0.44
CMTM3-202ENST00000424011 MS4A14Q96JA4 679 aa17.83■□□□□ 0.44
CMTM3-202ENST00000424011 FNBP1Q96RU3 617 aa17.83■□□□□ 0.44
CMTM3-202ENST00000424011 PARK7Q99497 189 aaKnown RBP17.83■□□□□ 0.44
CMTM3-202ENST00000424011 RNF14Q9UBS8 474 aa17.83■□□□□ 0.44
CMTM3-202ENST00000424011 PACSIN2Q9UNF0 486 aaPredicted RBP17.83■□□□□ 0.44
CMTM3-202ENST00000424011 TULP1O00294 542 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-202ENST00000424011 HBP1O60381 514 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 LRRN2O75325 713 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 DLATP10515 647 aaKnown RBP17.82■□□□□ 0.44
CMTM3-202ENST00000424011 MARK3P27448 753 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 MAP2K2P36507 400 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 MATR3P43243 847 aaKnown RBP eCLIP17.82■□□□□ 0.44
CMTM3-202ENST00000424011 DNA2P51530 1060 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 CLDN10P78369 228 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 CAPSQ13938 189 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 RGMBQ6NW40 437 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 LRRC31Q6UY01 552 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 ZPBP2Q6X784 338 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 ENOSF1Q7L5Y1 443 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 OLIG1Q8TAK6 271 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 PRPF31Q8WWY3 499 aaKnown RBP17.82■□□□□ 0.44
CMTM3-202ENST00000424011 NT5C1BQ96P26 610 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 SYT11Q9BT88 431 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 SUFUQ9UMX1 484 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 A0A087WUV0 522 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-202ENST00000424011 PLCB4Q15147 1175 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 SV2AQ7L0J3 742 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 GLYCTKQ8IVS8 523 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 ZBTB8OSQ8IWT0 167 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 PPM1KQ8N3J5 372 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 LRRC1Q9BTT6 524 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 C2orf40Q9H1Z8 148 aa17.82■□□□□ 0.44
CMTM3-202ENST00000424011 IGKV6-21A0A0C4DH24 114 aa17.81■□□□□ 0.44
CMTM3-202ENST00000424011 MCM3P25205 808 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms