RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 LIMD1Q9UGP4 676 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 DACH1Q9UI36 760 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 ARFGEF2Q9Y6D5 1785 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 C4BP0C0L5 1744 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 RREB1Q92766 1687 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 ROBO1Q9Y6N7 1651 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 SHTN1A0MZ66 631 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 FAM170BA6NMN3 283 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 SOBPA7XYQ1 873 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 THAP12O43422 761 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 RPP40O75818 363 aaKnown RBP3.82□□□□□ -1.8
TOP2A-201ENST00000423485 KELP23276 732 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 OXTRP30559 389 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 ZNF200P98182 395 aaPredicted RBP3.82□□□□□ -1.8
TOP2A-201ENST00000423485 CEBPZQ03701 1054 aaKnown RBP3.82□□□□□ -1.8
TOP2A-201ENST00000423485 GRM2Q14416 872 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 ACAP2Q15057 778 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 MAPRE1Q15691 268 aaKnown RBP3.82□□□□□ -1.8
TOP2A-201ENST00000423485 RSPO4Q2I0M5 234 aaPredicted RBP3.82□□□□□ -1.8
TOP2A-201ENST00000423485 NCAPH2Q6IBW4 605 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 ATG14Q6ZNE5 492 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 NLRP10Q86W26 655 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 HERC6Q8IVU3 1022 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 SMC5Q8IY18 1101 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 FAM177A1Q8N128 213 aaPredicted RBP3.82□□□□□ -1.8
TOP2A-201ENST00000423485 CHDHQ8NE62 594 aaPredicted RBP3.82□□□□□ -1.8
TOP2A-201ENST00000423485 ARMC2Q8NEN0 867 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 TPCN2Q8NHX9 752 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 MCOLN3Q8TDD5 553 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 PLCD4Q9BRC7 762 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 NUP85Q9BW27 656 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 PHF7Q9BWX1 381 aaPredicted RBP3.82□□□□□ -1.8
TOP2A-201ENST00000423485 FAM126AQ9BYI3 521 aaPredicted RBP3.82□□□□□ -1.8
TOP2A-201ENST00000423485 CIPCQ9C0C6 399 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 VPS45Q9NRW7 570 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 DSEQ9UL01 958 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 DNAJC16Q9Y2G8 782 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 SCN9AQ15858 1988 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 CPDO75976 1380 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 RHPN2P1A8MT19 583 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 PHF20L1A8MW92 1017 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 WNT10BO00744 389 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 YKT6O15498 198 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 GGPS1O95749 300 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 UBA7P41226 1012 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 GLUD2P49448 558 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 BLKP51451 505 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 CCDC38Q502W7 563 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 LYPLAL1Q5VWZ2 237 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 ASTLQ6HA08 431 aaPredicted RBP3.82□□□□□ -1.8
TOP2A-201ENST00000423485 PALB2Q86YC2 1186 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 NPAS4Q8IUM7 802 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 PANK1Q8TE04 598 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 FOPNLQ96NB1 174 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 TSSK1BQ9BXA7 367 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 ACE2Q9BYF1 805 aaPredicted RBP3.82□□□□□ -1.8
TOP2A-201ENST00000423485 DISC1Q9NRI5 854 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 FLNCQ14315 2725 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 ASAP2O43150 1006 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 HBP1O60381 514 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 CAVIN2O95810 425 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 LTFP02788 710 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 IRF1P10914 325 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 TRIM27P14373 513 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 FXR2P51116 673 aaKnown RBP eCLIP3.82□□□□□ -1.81e-7■■■□□ 18.3
TOP2A-201ENST00000423485 DGKQP52824 942 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 FKBP1AP62942 108 aaKnown RBP3.82□□□□□ -1.8
TOP2A-201ENST00000423485 TFAP4Q01664 338 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 NNTQ13423 1086 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 HIC1Q14526 733 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 C16orf46Q6P387 395 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 CHPFQ8IZ52 775 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 KCNE4Q8WWG9 221 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 SEPT1Q8WYJ6 367 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 PSTPIP2Q9H939 334 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 SLC2A4RGQ9NR83 387 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 FAM86C1Q9NVL1 165 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 PAG1Q9NWQ8 432 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 COQ3Q9NZJ6 369 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 TJP2Q9UDY2 1190 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 FRMD4BQ9Y2L6 1034 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 AXIN2Q9Y2T1 843 aa3.82□□□□□ -1.8
TOP2A-201ENST00000423485 CENPEQ02224 2701 aa3.81□□□□□ -1.8
TOP2A-201ENST00000423485 UTYO14607 1347 aa3.81□□□□□ -1.8
TOP2A-201ENST00000423485 BCL9LQ86UU0 1499 aa3.81□□□□□ -1.8
TOP2A-201ENST00000423485 PATL2C9JE40 543 aaKnown RBP3.81□□□□□ -1.8
TOP2A-201ENST00000423485 PER2O15055 1255 aa3.81□□□□□ -1.8
TOP2A-201ENST00000423485 GHRP10912 638 aa3.81□□□□□ -1.8
TOP2A-201ENST00000423485 HLA-EP13747 358 aa3.81□□□□□ -1.8
TOP2A-201ENST00000423485 CD19P15391 556 aa3.81□□□□□ -1.8
TOP2A-201ENST00000423485 AGXTP21549 392 aa3.81□□□□□ -1.8
TOP2A-201ENST00000423485 CES1P23141 567 aa3.81□□□□□ -1.8
TOP2A-201ENST00000423485 HARS2P49590 506 aaKnown RBP3.81□□□□□ -1.8
TOP2A-201ENST00000423485 SMSP52788 366 aa3.81□□□□□ -1.8
TOP2A-201ENST00000423485 PLCB3Q01970 1234 aa3.81□□□□□ -1.8
TOP2A-201ENST00000423485 DMTNQ08495 405 aa3.81□□□□□ -1.8
TOP2A-201ENST00000423485 DOC2BQ14184 412 aa3.81□□□□□ -1.8
TOP2A-201ENST00000423485 PLCL1Q15111 1095 aa3.81□□□□□ -1.8
TOP2A-201ENST00000423485 MAP9Q49MG5 647 aa3.81□□□□□ -1.8
TOP2A-201ENST00000423485 FKBP1CQ5VVH2 108 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms