RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 PIDD1Q9HB75 910 aa17.83■□□□□ 0.44
NPC1L1-203ENST00000423141 AGPAT3Q9NRZ7 376 aa17.83■□□□□ 0.44
NPC1L1-203ENST00000423141 WHRNQ9P202 907 aa17.83■□□□□ 0.44
NPC1L1-203ENST00000423141 SLC26A4O43511 780 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 ENTPD5O75356 428 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 SPAG7O75391 227 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 SGPL1O95470 568 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 CBX6O95503 412 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 POLGP54098 1239 aaPredicted RBP17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 GABPAQ06546 454 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 SGO2Q562F6 1265 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 C12orf50Q8NA57 414 aaPredicted RBP17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 CNBD1Q8NA66 436 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 CRYGNQ8WXF5 182 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 EIF2AK1Q9BQI3 630 aaKnown RBP17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 HERPUD2Q9BSE4 406 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 NUP85Q9BW27 656 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 FRMD4BQ9Y2L6 1034 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 MSH4O15457 936 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 T-ENOLP0DO92 83 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 STRN3Q13033 797 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 PARP6Q2NL67 630 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 LONP2Q86WA8 852 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 TEX9Q8N6V9 391 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 ZNF564Q8TBZ8 553 aaPredicted RBP17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 TBC1D10AQ9BXI6 508 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 VAV3Q9UKW4 847 aa17.82■□□□□ 0.44
NPC1L1-203ENST00000423141 EYA4O95677 639 aa17.81■□□□□ 0.44
NPC1L1-203ENST00000423141 FESP07332 822 aa17.81■□□□□ 0.44
NPC1L1-203ENST00000423141 PTDSS1P48651 473 aaKnown RBP17.81■□□□□ 0.44
NPC1L1-203ENST00000423141 SLC7A6OSQ96CW6 309 aaPredicted RBP17.81■□□□□ 0.44
NPC1L1-203ENST00000423141 C9orf72Q96LT7 481 aa17.81■□□□□ 0.44
NPC1L1-203ENST00000423141 FIZ1Q96SL8 496 aa17.81■□□□□ 0.44
NPC1L1-203ENST00000423141 ADGRA3Q8IWK6 1321 aa17.81■□□□□ 0.44
NPC1L1-203ENST00000423141 TOM1O60784 492 aa17.81■□□□□ 0.44
NPC1L1-203ENST00000423141 ATP6V1C1P21283 382 aa17.81■□□□□ 0.44
NPC1L1-203ENST00000423141 DDB1Q16531 1140 aa17.81■□□□□ 0.44
NPC1L1-203ENST00000423141 MFSD14BQ5SR56 506 aa17.81■□□□□ 0.44
NPC1L1-203ENST00000423141 NOP9Q86U38 636 aaKnown RBP17.81■□□□□ 0.44
NPC1L1-203ENST00000423141 FAM118BQ9BPY3 351 aa17.81■□□□□ 0.44
NPC1L1-203ENST00000423141 MKNK1Q9BUB5 465 aa17.81■□□□□ 0.44
NPC1L1-203ENST00000423141 NYXQ9GZU5 481 aa17.81■□□□□ 0.44
NPC1L1-203ENST00000423141 TULP1O00294 542 aaPredicted RBP17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 EIF3DO15371 548 aaKnown RBP eCLIP17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 SNUPNO95149 360 aaKnown RBP17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 GNAT1P11488 350 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 RWDD2BP57060 319 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 BFSP1Q12934 665 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 SETDB1Q15047 1291 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 TMED2Q15363 201 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 PSPC1Q8WXF1 523 aaKnown RBP17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 SNF8Q96H20 258 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 LRRC37BQ96QE4 947 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 CD209Q9NNX6 404 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 DDX4Q9NQI0 724 aaKnown RBP17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 DMAC2Q9NW81 257 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 GRID1Q9ULK0 1009 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 PHTF1Q9UMS5 762 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 EMSYQ7Z589 1322 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 KLHL33A6NCF5 533 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 TISP43B9A030 160 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 RASA4BC9J798 803 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 RASA4O43374 803 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 EXOC3O60645 756 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 SMIM24O75264 130 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 ITIH2P19823 946 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 SHROOM1Q2M3G4 852 aaPredicted RBP17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 GPATCH4Q5T3I0 446 aaKnown RBP17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 SLC30A9Q6PML9 568 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 TPH2Q8IWU9 490 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 ASAP3Q8TDY4 903 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 TSC22D3Q99576 134 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 LBHD1Q9BQE6 289 aaPredicted RBP17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 DENND2DQ9H6A0 471 aaPredicted RBP17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 LGALS13Q9UHV8 139 aa17.8■□□□□ 0.44
NPC1L1-203ENST00000423141 CHMP2AO43633 222 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 AHCYL1O43865 530 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 BCRP11274 1271 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 PECAM1P16284 738 aaPredicted RBP17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 GAP43P17677 238 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 YARSP54577 528 aaKnown RBP17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 MXRA7P84157 204 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 MOGSQ13724 837 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 TCEAL1Q15170 157 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 C1orf186Q6ZWK4 172 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 HS2ST1Q7LGA3 356 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 AGGF1Q8N302 714 aaeCLIP17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 ANKRD27Q96NW4 1050 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 NEFHP12036 1026 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 HSPA2P54652 639 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 IL9RQ01113 521 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 PPP3CAQ08209 521 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 Q4G0T1 1027 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 ZNF720Q7Z2F6 126 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 SLC47A2Q86VL8 602 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 EPS8L1Q8TE68 723 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 GRAMD1AQ96CP6 724 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 PCIF1Q9H4Z3 704 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 PARVGQ9HBI0 331 aa17.79■□□□□ 0.44
NPC1L1-203ENST00000423141 R3HDM2Q9Y2K5 976 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms