RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 SLC5A3P53794 718 aa5.58□□□□□ -1.52
LINC00397-201ENST00000422074 SRSF2Q01130 221 aaKnown RBP5.58□□□□□ -1.52
LINC00397-201ENST00000422074 SP140Q13342 867 aa5.58□□□□□ -1.52
LINC00397-201ENST00000422074 INAVAQ3KP66 663 aa5.58□□□□□ -1.52
LINC00397-201ENST00000422074 LRRC55Q6ZSA7 311 aa5.58□□□□□ -1.52
LINC00397-201ENST00000422074 TRMT2AQ8IZ69 625 aaKnown RBP5.58□□□□□ -1.52
LINC00397-201ENST00000422074 CPT1CQ8TCG5 803 aa5.58□□□□□ -1.52
LINC00397-201ENST00000422074 MYEOVQ96EZ4 313 aa5.58□□□□□ -1.52
LINC00397-201ENST00000422074 CEP89Q96ST8 783 aa5.58□□□□□ -1.52
LINC00397-201ENST00000422074 ZNF768Q9H5H4 540 aaKnown RBP5.58□□□□□ -1.52
LINC00397-201ENST00000422074 CCM2LQ9NUG4 571 aaPredicted RBP5.58□□□□□ -1.52
LINC00397-201ENST00000422074 EIF2B4Q9UI10 523 aaKnown RBP5.58□□□□□ -1.52
LINC00397-201ENST00000422074 TMEM200CA6NKL6 621 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 WNT10BO00744 389 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 FOXN1O15353 648 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 ADCY6O43306 1168 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 SUV39H1O43463 412 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 RPS6KA4O75676 772 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 RBP3P10745 1247 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 ECHS1P30084 290 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 GUCY1A2P33402 732 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 SREBF1P36956 1147 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 MGAT2Q10469 447 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 FAM102AQ5T9C2 384 aaPredicted RBP5.57□□□□□ -1.52
LINC00397-201ENST00000422074 MBNL2Q5VZF2 373 aaKnown RBP5.57□□□□□ -1.52
LINC00397-201ENST00000422074 GDF7Q7Z4P5 450 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 NECAB2Q7Z6G3 386 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 RPUSD2Q8IZ73 545 aaKnown RBP5.57□□□□□ -1.52
LINC00397-201ENST00000422074 SYNE4Q8N205 404 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 OR10H5Q8NGA6 315 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 COG1Q8WTW3 980 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 SSH1Q8WYL5 1049 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 PUS7LQ9H0K6 701 aaKnown RBP5.57□□□□□ -1.52
LINC00397-201ENST00000422074 SPC25Q9HBM1 224 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 DNAJC28Q9NX36 388 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 MCM8Q9UJA3 840 aa5.57□□□□□ -1.52
LINC00397-201ENST00000422074 TMEM191CA6NGB0 347 aa5.56□□□□□ -1.52
LINC00397-201ENST00000422074 CXorf49A8MYA2 514 aaPredicted RBP5.56□□□□□ -1.52
LINC00397-201ENST00000422074 CANXP27824 592 aaKnown RBP5.56□□□□□ -1.52
LINC00397-201ENST00000422074 ADSLP30566 484 aaPredicted RBP5.56□□□□□ -1.52
LINC00397-201ENST00000422074 BMPR1AP36894 532 aa5.56□□□□□ -1.52
LINC00397-201ENST00000422074 FAM189BP81408 668 aa5.56□□□□□ -1.52
LINC00397-201ENST00000422074 NHLH2Q02577 135 aa5.56□□□□□ -1.52
LINC00397-201ENST00000422074 KLF1Q13351 362 aaPredicted RBP5.56□□□□□ -1.52
LINC00397-201ENST00000422074 LY6G5CQ5SRR4 150 aa5.56□□□□□ -1.52
LINC00397-201ENST00000422074 EFCAB12Q6NXP0 572 aa5.56□□□□□ -1.52
LINC00397-201ENST00000422074 MRGPRGQ86SM5 289 aa5.56□□□□□ -1.52
LINC00397-201ENST00000422074 DDX42Q86XP3 938 aaKnown RBP eCLIP5.56□□□□□ -1.52
LINC00397-201ENST00000422074 ATL2Q8NHH9 583 aa5.56□□□□□ -1.52
LINC00397-201ENST00000422074 ZFP28Q8NHY6 868 aa5.56□□□□□ -1.52
LINC00397-201ENST00000422074 SLC35B2Q8TB61 432 aa5.56□□□□□ -1.52
LINC00397-201ENST00000422074 TFAP2CQ92754 450 aa5.56□□□□□ -1.52
LINC00397-201ENST00000422074 SPON1Q9HCB6 807 aa5.56□□□□□ -1.52
LINC00397-201ENST00000422074 SBNO2Q9Y2G9 1366 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 PNPLA7Q6ZV29 1317 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 A0A087X1B8 175 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 RNASET2O00584 256 aaKnown RBP5.55□□□□□ -1.52
LINC00397-201ENST00000422074 ABHD16AO95870 558 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 SNRPA1P09661 255 aaKnown RBP5.55□□□□□ -1.52
LINC00397-201ENST00000422074 LAG3P18627 525 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 AGXTP21549 392 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 WASP42768 502 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 CLRN1P58418 232 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 BEAN1Q3B7T3 259 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 OTUD7BQ6GQQ9 843 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 PLXDC1Q8IUK5 500 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 REPS2Q8NFH8 660 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.55□□□□□ -1.52
LINC00397-201ENST00000422074 CASKIN2Q8WXE0 1202 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 CYFIP2Q96F07 1278 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 MLST8Q9BVC4 326 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 SLC5A4Q9NY91 659 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 TRPM5Q9NZQ8 1165 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 SIK3Q9Y2K2 1263 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 GPR45Q9Y5Y3 372 aa5.55□□□□□ -1.52
LINC00397-201ENST00000422074 WASHC2AQ641Q2 1341 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 DRGXA6NNA5 263 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 MARCH11A6NNE9 402 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 ENDOD1O94919 500 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 IL2RBP14784 551 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 PTPN7P35236 360 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 SLC6A9P48067 706 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 CCT2P78371 535 aaKnown RBP5.54□□□□□ -1.52
LINC00397-201ENST00000422074 TAP1Q03518 808 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 COL10A1Q03692 680 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 SEPT2Q15019 361 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 AGAP9Q5VTM2 703 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 LAIR1Q6GTX8 287 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 ARHGEF19Q8IW93 802 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 PQLC1Q8N2U9 271 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 CBARPQ8N350 705 aaPredicted RBP5.54□□□□□ -1.52
LINC00397-201ENST00000422074 PROKR1Q8TCW9 393 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 FAM193BQ96PV7 902 aaPredicted RBP5.54□□□□□ -1.52
LINC00397-201ENST00000422074 ADI1Q9BV57 179 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 AKIP1Q9NQ31 210 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 DMRT3Q9NQL9 472 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 ATP8A1Q9Y2Q0 1164 aa5.54□□□□□ -1.52
LINC00397-201ENST00000422074 CENPVL1A0A0U1RR11 272 aa5.53□□□□□ -1.52
LINC00397-201ENST00000422074 GRID2IPA4D2P6 1211 aa5.53□□□□□ -1.52
LINC00397-201ENST00000422074 FAM171A2A8MVW0 826 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms