RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 PARM1Q6UWI2 310 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 GLYCTKQ8IVS8 523 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 C4orf19Q8IY42 314 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 BLIDQ8IZY5 108 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 FAM177A1Q8N128 213 aaPredicted RBP11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 TCP11Q8WWU5 503 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 BORCS6Q96GS4 357 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 FAM20AQ96MK3 541 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 YTHDC1Q96MU7 727 aaKnown RBP11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 LXNQ9BS40 222 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 OSBPL6Q9BZF3 934 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 CSRNP2Q9H175 543 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 XPNPEP1Q9NQW7 623 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 ADAM28Q9UKQ2 775 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 PCDHGA2Q9Y5H1 932 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 SNX14Q9Y5W7 946 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 KMT2BQ9UMN6 2715 aaPredicted RBP11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 CACNA1IQ9P0X4 2223 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 ARID2Q68CP9 1835 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 MYH15Q9Y2K3 1946 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 MTCL1Q9Y4B5 1905 aaKnown RBP11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 HNRNPA1P09651 372 aaKnown RBP eCLIP11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 ARF4P18085 180 aaPredicted RBP11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 HOXA9P31269 272 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 YWHABP31946 246 aaKnown RBP11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 HSPA4P34932 840 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 CCT2P78371 535 aaKnown RBP11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 NTHL1P78549 312 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 PRKCQQ04759 706 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 MBTD1Q05BQ5 628 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 POU5F1BQ06416 359 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 GRIK3Q13003 919 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 MLF2Q15773 248 aaPredicted RBP11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 INF2Q27J81 1249 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 RTP2Q5QGT7 225 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 VARS2Q5ST30 1063 aaKnown RBP11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 MTSS1LQ765P7 747 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 GRASPQ7Z6J2 395 aaPredicted RBP11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 TRIM22Q8IYM9 498 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 ZBTB44Q8NCP5 570 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 NELL1Q92832 810 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 FGF13Q92913 245 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 CPB2Q96IY4 423 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 CNTNAP3BQ96NU0 1288 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 APOL6Q9BWW8 343 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 BCO2Q9BYV7 579 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 CNTNAP3Q9BZ76 1288 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 SPATA6Q9NWH7 488 aaPredicted RBP11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 MIA3Q5JRA6 1907 aa11.36□□□□□ -0.59
TNFAIP3-202ENST00000420009 SF3B1O75533 1304 aaKnown RBP eCLIP11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 TDRD15B5MCY1 1934 aaKnown RBP11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 INO80B-WBP1J3KQ70 363 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 LAMTOR5O43504 91 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 CDC45O75419 566 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 POU2F2P09086 479 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 MAGEA9P43362 315 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 SPIRE1Q08AE8 756 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 SNW1Q13573 536 aaKnown RBP11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 CAPSQ13938 189 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 MXD4Q14582 209 aaPredicted RBP11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 EPHA7Q15375 998 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 PPP4R3AQ6IN85 833 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 GALNT17Q6IS24 598 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 PRSS55Q6UWB4 352 aaPredicted RBP11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 RSPO2Q6UXX9 243 aaPredicted RBP11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 KRT25Q7Z3Z0 450 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 SKAP1Q86WV1 359 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 HACE1Q8IYU2 909 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 PIK3R5Q8WYR1 880 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 HAS1Q92839 578 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 MTRQ99707 1265 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 CLSTN3Q9BQT9 956 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 PAAF1Q9BRP4 392 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 NFKBIZQ9BYH8 718 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 EPC1Q9H2F5 836 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 LTB4R2Q9NPC1 389 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 RGL1Q9NZL6 768 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 NCDNQ9UBB6 729 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 CACNG4Q9UBN1 327 aa11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 MTF2Q9Y483 593 aaPredicted RBP11.35□□□□□ -0.59
TNFAIP3-202ENST00000420009 ZBTB39O15060 712 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 TBX3O15119 743 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 B4GALT5O43286 388 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 LILRB5O75023 590 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 KRT37O76014 449 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 DEXIO95424 95 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 C8AP07357 584 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 GCFC2P16383 781 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 SDHBP21912 280 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 AKAP5P24588 427 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 IRX6P78412 446 aaPredicted RBP11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 PFKPQ01813 784 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 NCBP1Q09161 790 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 TFDP1Q14186 410 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 HSP90AA2PQ14568 343 aaPredicted RBP11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 UBXN2BQ14CS0 331 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 SLC44A4Q53GD3 710 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 XKR9Q5GH70 373 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 LIN9Q5TKA1 542 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 SLC27A1Q6PCB7 646 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms