RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 DOK3Q7L591 496 aa4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 RD3Q7Z3Z2 195 aa4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 GDF7Q7Z4P5 450 aa4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 GLB1L2Q8IW92 636 aa4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 UNC5BQ8IZJ1 945 aa4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 CLRN3Q8NCR9 226 aa4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 OR14C36Q8NHC7 312 aa4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 GAB3Q8WWW8 586 aa4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 RAX2Q96IS3 184 aa4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 PKNOX2Q96KN3 472 aa4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 ANO3Q9BYT9 981 aa4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 AKIP1Q9NQ31 210 aa4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 USP18Q9UMW8 372 aa4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 WASHC2AQ641Q2 1341 aa4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 GAGE12BA1L429 117 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 PRSS38A1L453 326 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 GAGE12HA6NDE8 117 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 LEFTY2O00292 366 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 ELL2O00472 640 aaPredicted RBP4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 EYA4O95677 639 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 PFKMP08237 780 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 MTHFD2P13995 350 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 HSP90B1P14625 803 aaKnown RBP4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 WNT3AP56704 352 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 CD69Q07108 199 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 PPARAQ07869 468 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 FSCN1Q16658 493 aaKnown RBP4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 UGT8Q16880 541 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 BEAN1Q3B7T3 259 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 ZBTB41Q5SVQ8 909 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 GPRIN1Q7Z2K8 1008 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 NECAB2Q7Z6G3 386 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 CMTR2Q8IYT2 770 aaKnown RBP4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 LINC00476Q8WZB0 136 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 NELL1Q92832 810 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 IL17RAQ96F46 866 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 AHCYL2Q96HN2 611 aaKnown RBP4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 COQ10AQ96MF6 247 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 DCLRE1CQ96SD1 692 aaKnown RBP4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 CLCA2Q9UQC9 943 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 ATP8A1Q9Y2Q0 1164 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 PPP2R3BQ9Y5P8 575 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 FANCIQ9NVI1 1328 aa4.45□□□□□ -1.7
SDCBPP3-201ENST00000419629 GOLGA8AA7E2F4 631 aa4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 PRR5-ARHGAP8B1AHC4 643 aa4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 ZNF185O15231 689 aa4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 NDUFA10O95299 355 aa4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 SPATA31D3P0C874 917 aa4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 NCLP19338 710 aaKnown RBP4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 ENPP1P22413 925 aa4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 BMPR1AP36894 532 aa4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 GZMKP49863 264 aa4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 DUSP2Q05923 314 aa4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 FOXI1Q12951 378 aa4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 GLIPR1L2Q4G1C9 344 aa4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 PRR16Q569H4 304 aa4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 GJC2Q5T442 439 aaPredicted RBP4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 FBXO42Q6P3S6 717 aa4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 FAM180AQ6UWF9 173 aa4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 SPATA31D4Q6ZUB0 917 aa4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 SYT12Q8IV01 421 aa4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 PUS7LQ9H0K6 701 aaKnown RBP4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 MS4A5Q9H3V2 200 aa4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 SPON1Q9HCB6 807 aa4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 ALG13Q9NP73 1137 aaKnown RBP4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 TOPORSQ9NS56 1045 aaPredicted RBP4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.44□□□□□ -1.7
SDCBPP3-201ENST00000419629 ANKRD62A6NC57 917 aa4.43□□□□□ -1.7
SDCBPP3-201ENST00000419629 ALG1L2C9J202 215 aa4.43□□□□□ -1.7
SDCBPP3-201ENST00000419629 LY86O95711 162 aa4.43□□□□□ -1.7
SDCBPP3-201ENST00000419629 HLA-DOAP06340 250 aa4.43□□□□□ -1.7
SDCBPP3-201ENST00000419629 CLEC2LP0C7M8 214 aa4.43□□□□□ -1.7
SDCBPP3-201ENST00000419629 ZSCAN20P17040 1043 aaPredicted RBP4.43□□□□□ -1.7
SDCBPP3-201ENST00000419629 SEC24CP53992 1094 aa4.43□□□□□ -1.7
SDCBPP3-201ENST00000419629 MEF2AQ02078 507 aaPredicted RBP4.43□□□□□ -1.7
SDCBPP3-201ENST00000419629 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.43□□□□□ -1.7
SDCBPP3-201ENST00000419629 DDX42Q86XP3 938 aaKnown RBP eCLIP4.43□□□□□ -1.7
SDCBPP3-201ENST00000419629 XYLT1Q86Y38 959 aa4.43□□□□□ -1.7
SDCBPP3-201ENST00000419629 PLXDC1Q8IUK5 500 aa4.43□□□□□ -1.7
SDCBPP3-201ENST00000419629 FAM98AQ8NCA5 519 aaKnown RBP4.43□□□□□ -1.7
SDCBPP3-201ENST00000419629 TEX101Q9BY14 249 aa4.43□□□□□ -1.7
SDCBPP3-201ENST00000419629 KCTD10Q9H3F6 313 aa4.43□□□□□ -1.7
SDCBPP3-201ENST00000419629 SLC5A4Q9NY91 659 aa4.43□□□□□ -1.7
SDCBPP3-201ENST00000419629 ZBTB21Q9ULJ3 1066 aa4.43□□□□□ -1.7
SDCBPP3-201ENST00000419629 INSL6Q9Y581 213 aa4.43□□□□□ -1.7
SDCBPP3-201ENST00000419629 PIPSLA2A3N6 862 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 LCHNA4D1U4 455 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 SEC24DO94855 1032 aaPredicted RBP4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 CXCR5P32302 372 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 DEKP35659 375 aaKnown RBP4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 PTH2RP49190 550 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 LGALS4P56470 323 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 SCAND1P57086 179 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 RNASE9P60153 205 aaKnown RBP4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 MRPS9P82933 396 aaKnown RBP4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 GUCY1B3Q02153 619 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 MGAT5Q09328 741 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 CT83Q5H943 113 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 PITRM1Q5JRX3 1037 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 PAPD7Q5XG87 772 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms