RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 FAM189BP81408 668 aa13.97□□□□□ -0.17
ATG4B-208ENST00000419606 PPIGQ13427 754 aaKnown RBP eCLIP13.97□□□□□ -0.171e-10■□□□□ 10.9
ATG4B-208ENST00000419606 ENOX2Q16206 610 aaKnown RBP13.97□□□□□ -0.17
ATG4B-208ENST00000419606 TMEM240Q5SV17 173 aa13.97□□□□□ -0.17
ATG4B-208ENST00000419606 FOXR2Q6PJQ5 311 aa13.97□□□□□ -0.17
ATG4B-208ENST00000419606 TMCO2Q7Z6W1 182 aaPredicted RBP13.97□□□□□ -0.17
ATG4B-208ENST00000419606 FILIP1Q7Z7B0 1213 aa13.97□□□□□ -0.17
ATG4B-208ENST00000419606 ECHDC2Q86YB7 292 aa13.97□□□□□ -0.17
ATG4B-208ENST00000419606 RPUSD2Q8IZ73 545 aaKnown RBP13.97□□□□□ -0.17
ATG4B-208ENST00000419606 RNF169Q8NCN4 708 aa13.97□□□□□ -0.17
ATG4B-208ENST00000419606 TMEM174Q8WUU8 243 aa13.97□□□□□ -0.17
ATG4B-208ENST00000419606 FBXL18Q96ME1 805 aa13.97□□□□□ -0.17
ATG4B-208ENST00000419606 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.97□□□□□ -0.175e-7■□□□□ 11.3
ATG4B-208ENST00000419606 FTHL17Q9BXU8 183 aa13.97□□□□□ -0.17
ATG4B-208ENST00000419606 TRIM6Q9C030 488 aaPredicted RBP13.97□□□□□ -0.17
ATG4B-208ENST00000419606 KLK14Q9P0G3 267 aa13.97□□□□□ -0.17
ATG4B-208ENST00000419606 TNRC18O15417 2968 aaPredicted RBP13.97□□□□□ -0.17
ATG4B-208ENST00000419606 A0A0U1RQF3 1178 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 IKBKBO14920 756 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 RECQL4O94761 1208 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 CXCL8P10145 99 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 ATP1A3P13637 1013 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 RPL13P26373 211 aaKnown RBP13.96□□□□□ -0.17
ATG4B-208ENST00000419606 MAGEA10P43363 369 aaPredicted RBP13.96□□□□□ -0.17
ATG4B-208ENST00000419606 RGS19P49795 217 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 AFF1P51825 1210 aaKnown RBP13.96□□□□□ -0.17
ATG4B-208ENST00000419606 DLG4P78352 724 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 DEFB103AP81534 67 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 SPAG1Q07617 926 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 IKBKEQ14164 716 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 MYBPC2Q14324 1141 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 SNRNP35Q16560 246 aaKnown RBP13.96□□□□□ -0.17
ATG4B-208ENST00000419606 SLC10A6Q3KNW5 377 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 CDKAL1Q5VV42 579 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 AGMOQ6ZNB7 445 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 SLC24A5Q71RS6 500 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 MRPL10Q7Z7H8 261 aaKnown RBP13.96□□□□□ -0.17
ATG4B-208ENST00000419606 ZNF598Q86UK7 904 aaKnown RBP13.96□□□□□ -0.17
ATG4B-208ENST00000419606 FAM186BQ8IYM0 893 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 FAM212AQ96EL1 285 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 BORCS6Q96GS4 357 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 CNOT6LQ96LI5 555 aaKnown RBP13.96□□□□□ -0.17
ATG4B-208ENST00000419606 CEP63Q96MT8 703 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 TRAIPQ9BWF2 469 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 PARP2Q9UGN5 583 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 NR2E3Q9Y5X4 410 aa13.96□□□□□ -0.17
ATG4B-208ENST00000419606 PTPRJQ12913 1337 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 ZNF233A6NK53 670 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 SMTNL1A8MU46 457 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 BECN2A8MW95 431 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 LACTBL1A8MY62 500 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 ZNF623O75123 536 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 LDHAP00338 332 aaKnown RBP13.95□□□□□ -0.18
ATG4B-208ENST00000419606 FGBP02675 491 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 CLTAP09496 248 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 FGFR1P11362 822 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 ITGA4P13612 1032 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 ZNF18P17022 549 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 PSMC2P35998 433 aaKnown RBP13.95□□□□□ -0.18
ATG4B-208ENST00000419606 GATMP50440 423 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 CYP24A1Q07973 514 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 C1orf220Q5T0J3 134 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 LMBRD2Q68DH5 695 aaPredicted RBP13.95□□□□□ -0.18
ATG4B-208ENST00000419606 CREBRFQ8IUR6 639 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 CRIPAKQ8N1N5 446 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 MFSD14AQ96MC6 490 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 ZFP42Q96MM3 310 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 ACAP3Q96P50 834 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 POP1Q99575 1024 aaKnown RBP13.95□□□□□ -0.18
ATG4B-208ENST00000419606 LBHD1Q9BQE6 289 aaPredicted RBP13.95□□□□□ -0.18
ATG4B-208ENST00000419606 ANP32EQ9BTT0 268 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 CCDC94Q9BW85 323 aaPredicted RBP13.95□□□□□ -0.18
ATG4B-208ENST00000419606 THAP9Q9H5L6 903 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 PDE11AQ9HCR9 933 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 C1orf112Q9NSG2 853 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 MIOSQ9NXC5 875 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 RBAKQ9NYW8 714 aaPredicted RBP13.95□□□□□ -0.18
ATG4B-208ENST00000419606 CXXC1Q9P0U4 656 aaPredicted RBP13.95□□□□□ -0.18
ATG4B-208ENST00000419606 FRMD4BQ9Y2L6 1034 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 RALGAPA2Q2PPJ7 1873 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 CITO14578 2027 aa13.95□□□□□ -0.18
ATG4B-208ENST00000419606 ABHD14A-ACY1A0A1B0GW23 586 aa13.94□□□□□ -0.18
ATG4B-208ENST00000419606 KCNJ18B7U540 433 aa13.94□□□□□ -0.18
ATG4B-208ENST00000419606 H0YGN5 161 aa13.94□□□□□ -0.18
ATG4B-208ENST00000419606 KIAA0391O15091 583 aaKnown RBP13.94□□□□□ -0.18
ATG4B-208ENST00000419606 SLC16A3O15427 465 aaKnown RBP13.94□□□□□ -0.18
ATG4B-208ENST00000419606 UPP2O95045 317 aa13.94□□□□□ -0.18
ATG4B-208ENST00000419606 CAVIN2O95810 425 aa13.94□□□□□ -0.18
ATG4B-208ENST00000419606 PFKMP08237 780 aa13.94□□□□□ -0.18
ATG4B-208ENST00000419606 TRIM49P0CI25 452 aa13.94□□□□□ -0.18
ATG4B-208ENST00000419606 TRIM49CP0CI26 452 aa13.94□□□□□ -0.18
ATG4B-208ENST00000419606 RAB27AP51159 221 aa13.94□□□□□ -0.18
ATG4B-208ENST00000419606 TTC3P53804 2025 aa13.94□□□□□ -0.18
ATG4B-208ENST00000419606 WDR5P61964 334 aaKnown RBP13.94□□□□□ -0.18
ATG4B-208ENST00000419606 KCNJ12Q14500 433 aa13.94□□□□□ -0.18
ATG4B-208ENST00000419606 PDCD11Q14690 1871 aaKnown RBP13.94□□□□□ -0.18
ATG4B-208ENST00000419606 CCDC40Q4G0X9 1142 aa13.94□□□□□ -0.18
ATG4B-208ENST00000419606 SCARA3Q6AZY7 606 aa13.94□□□□□ -0.18
ATG4B-208ENST00000419606 APBB1IPQ7Z5R6 666 aaPredicted RBP13.94□□□□□ -0.18
ATG4B-208ENST00000419606 BRSK2Q8IWQ3 736 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms