RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 RGMBQ6NW40 437 aa6.87□□□□□ -1.31
VPS45-203ENST00000419023 OLFM4Q6UX06 510 aa6.87□□□□□ -1.31
VPS45-203ENST00000419023 DPP8Q6V1X1 898 aaPredicted RBP6.87□□□□□ -1.31
VPS45-203ENST00000419023 DDX46Q7L014 1031 aaKnown RBP6.87□□□□□ -1.31
VPS45-203ENST00000419023 CTU1Q7Z7A3 348 aaKnown RBP6.87□□□□□ -1.31
VPS45-203ENST00000419023 STRA8Q7Z7C7 330 aa6.87□□□□□ -1.31
VPS45-203ENST00000419023 RTN4RL1Q86UN2 441 aaPredicted RBP6.87□□□□□ -1.31
VPS45-203ENST00000419023 NUDT10Q8NFP7 164 aa6.87□□□□□ -1.31
VPS45-203ENST00000419023 RTF1Q92541 710 aaKnown RBP6.87□□□□□ -1.31
VPS45-203ENST00000419023 FOXRED1Q96CU9 486 aaPredicted RBP6.87□□□□□ -1.31
VPS45-203ENST00000419023 NUDT11Q96G61 164 aa6.87□□□□□ -1.31
VPS45-203ENST00000419023 YTHDC1Q96MU7 727 aaKnown RBP6.87□□□□□ -1.31
VPS45-203ENST00000419023 KCNC2Q96PR1 638 aa6.87□□□□□ -1.31
VPS45-203ENST00000419023 GLIS2Q9BZE0 524 aaPredicted RBP6.87□□□□□ -1.31
VPS45-203ENST00000419023 FTSJ1Q9UET6 329 aa6.87□□□□□ -1.31
VPS45-203ENST00000419023 PRKAB1Q9Y478 270 aa6.87□□□□□ -1.31
VPS45-203ENST00000419023 SCN11AQ9UI33 1791 aa6.87□□□□□ -1.31
VPS45-203ENST00000419023 PDE4DIPQ5VU43 2346 aa6.87□□□□□ -1.31
VPS45-203ENST00000419023 MRC1P22897 1456 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 ANKRD31Q8N7Z5 1873 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 CDHR2Q9BYE9 1310 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 H0Y858 1186 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 SASH1O94885 1247 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 FKBP9O95302 570 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 CHGBP05060 677 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 ADCYAP1R1P41586 468 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 STRN3Q13033 797 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 CT47A1Q5JQC4 288 aaPredicted RBP6.86□□□□□ -1.31
VPS45-203ENST00000419023 FAM26FQ5R3K3 315 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 LCE3BQ5TA77 95 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 ESRP1Q6NXG1 681 aaKnown RBP6.86□□□□□ -1.31
VPS45-203ENST00000419023 FKBP9P1Q75LS8 142 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 ZDHHC14Q8IZN3 488 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 EFHBQ8N7U6 833 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 WDR48Q8TAF3 677 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 USP7Q93009 1102 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 DCPSQ96C86 337 aaKnown RBP6.86□□□□□ -1.31
VPS45-203ENST00000419023 C16orf92Q96LL3 132 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 BTBD2Q9BX70 525 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 TMEM168Q9H0V1 697 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 PARD6AQ9NPB6 346 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 USP16Q9Y5T5 823 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 CASP8AP2Q9UKL3 1982 aa6.86□□□□□ -1.31
VPS45-203ENST00000419023 NPC1L1Q9UHC9 1359 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 COL11A2P13942 1736 aaPredicted RBP6.85□□□□□ -1.31
VPS45-203ENST00000419023 TGM5O43548 720 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 NOBOXO60393 691 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 CNGA1P29973 690 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 PIP4K2AP48426 406 aaPredicted RBP6.85□□□□□ -1.31
VPS45-203ENST00000419023 LSSP48449 732 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 GMPSP49915 693 aaPredicted RBP6.85□□□□□ -1.31
VPS45-203ENST00000419023 GJA9P57773 515 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 OCRLQ01968 901 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 KIF23Q02241 960 aaPredicted RBP6.85□□□□□ -1.31
VPS45-203ENST00000419023 ALDH6A1Q02252 535 aaKnown RBP6.85□□□□□ -1.31
VPS45-203ENST00000419023 DHCR24Q15392 516 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 WDR72Q3MJ13 1102 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 KIF6Q6ZMV9 814 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 PPP1R42Q7Z4L9 355 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 PASD1Q8IV76 773 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 NGEFQ8N5V2 710 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 IL17REQ8NFR9 667 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 CALML6Q8TD86 181 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 LCORQ96JN0 433 aaPredicted RBP6.85□□□□□ -1.31
VPS45-203ENST00000419023 CRAMP1Q96RY5 1269 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 GBA2Q9HCG7 927 aaPredicted RBP6.85□□□□□ -1.31
VPS45-203ENST00000419023 USP40Q9NVE5 1235 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 CNOT7Q9UIV1 285 aaKnown RBP6.85□□□□□ -1.31
VPS45-203ENST00000419023 CACNA1SQ13698 1873 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 ADAMTSL1Q8N6G6 1762 aa6.85□□□□□ -1.31
VPS45-203ENST00000419023 UBA6A0AVT1 1052 aaPredicted RBP6.84□□□□□ -1.31
VPS45-203ENST00000419023 OTOL1A6NHN0 477 aaPredicted RBP6.84□□□□□ -1.31
VPS45-203ENST00000419023 MARCH6O60337 910 aa6.84□□□□□ -1.31
VPS45-203ENST00000419023 KLHL18O94889 574 aa6.84□□□□□ -1.31
VPS45-203ENST00000419023 VIL1P09327 827 aaKnown RBP6.84□□□□□ -1.31
VPS45-203ENST00000419023 INHBBP09529 407 aa6.84□□□□□ -1.31
VPS45-203ENST00000419023 ADCY8P40145 1251 aa6.84□□□□□ -1.31
VPS45-203ENST00000419023 SLC6A3Q01959 620 aa6.84□□□□□ -1.31
VPS45-203ENST00000419023 CXCL9Q07325 125 aa6.84□□□□□ -1.31
VPS45-203ENST00000419023 EPHA7Q15375 998 aa6.84□□□□□ -1.31
VPS45-203ENST00000419023 CRY2Q49AN0 593 aa6.84□□□□□ -1.31
VPS45-203ENST00000419023 KRT26Q7Z3Y9 468 aa6.84□□□□□ -1.31
VPS45-203ENST00000419023 FILIP1Q7Z7B0 1213 aa6.84□□□□□ -1.31
VPS45-203ENST00000419023 E2F7Q96AV8 911 aa6.84□□□□□ -1.31
VPS45-203ENST00000419023 FOXB1Q99853 325 aa6.84□□□□□ -1.31
VPS45-203ENST00000419023 OR10A5Q9H207 317 aa6.84□□□□□ -1.31
VPS45-203ENST00000419023 RNF186Q9NXI6 227 aa6.84□□□□□ -1.31
VPS45-203ENST00000419023 PGAP2Q9UHJ9 254 aa6.84□□□□□ -1.31
VPS45-203ENST00000419023 SCN7AQ01118 1682 aa6.84□□□□□ -1.32
VPS45-203ENST00000419023 TRPM7Q96QT4 1865 aa6.83□□□□□ -1.32
VPS45-203ENST00000419023 THSD7BQ9C0I4 1608 aa6.83□□□□□ -1.32
VPS45-203ENST00000419023 KIF7Q2M1P5 1343 aa6.83□□□□□ -1.32
VPS45-203ENST00000419023 ARFGEF2Q9Y6D5 1785 aa6.83□□□□□ -1.32
VPS45-203ENST00000419023 MROH6A6NGR9 719 aa6.83□□□□□ -1.32
VPS45-203ENST00000419023 C9orf118A6NHY6 69 aa6.83□□□□□ -1.32
VPS45-203ENST00000419023 ERVV-1B6SEH8 477 aa6.83□□□□□ -1.32
VPS45-203ENST00000419023 BBOX1O75936 387 aa6.83□□□□□ -1.32
VPS45-203ENST00000419023 RAD17O75943 681 aa6.83□□□□□ -1.32
VPS45-203ENST00000419023 PRLP01236 227 aa6.83□□□□□ -1.32
VPS45-203ENST00000419023 BPIP17213 487 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms