RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 KCNQ5Q9NR82 932 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 MYO3BQ8WXR4 1341 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 TISP43B9A030 160 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 PODXLO00592 558 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 PHF2O75151 1096 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 SETSIPP0DME0 302 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 ATP6V1C1P21283 382 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 CHRNA3P32297 505 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 ITGA8P53708 1063 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 DYNLT1P63172 113 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 PASD1Q8IV76 773 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 SLC25A41Q8N5S1 370 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 CNKSR1Q969H4 720 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 PGM2Q96G03 612 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 HIC2Q96JB3 615 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 MTMR9Q96QG7 549 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 CYP39A1Q9NYL5 469 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 ANAPC7Q9UJX3 599 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 C5P01031 1676 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 K7ENM7 598 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 CAMTA2O94983 1202 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 FXR2P51116 673 aaKnown RBP eCLIP12.46□□□□□ -0.412e-6■■■□□ 15.4
DDR1-232ENST00000418800 BTKQ06187 659 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 THOC5Q13769 683 aaKnown RBP12.46□□□□□ -0.41
DDR1-232ENST00000418800 SMAD1Q15797 465 aaKnown RBP12.46□□□□□ -0.41
DDR1-232ENST00000418800 CCDC174Q6PII3 467 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 CROCCP2Q86T23 111 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 GALNT15Q8N3T1 639 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 PRELID2Q8N945 189 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 DENND2DQ9H6A0 471 aaPredicted RBP12.46□□□□□ -0.41
DDR1-232ENST00000418800 PHTF1Q9UMS5 762 aa12.46□□□□□ -0.41
DDR1-232ENST00000418800 PFASO15067 1338 aa12.46□□□□□ -0.42
DDR1-232ENST00000418800 FAM187AA6NFU0 413 aa12.46□□□□□ -0.42
DDR1-232ENST00000418800 ESRRAP11474 423 aaPredicted RBP12.46□□□□□ -0.42
DDR1-232ENST00000418800 SERPINB3P29508 390 aa12.46□□□□□ -0.42
DDR1-232ENST00000418800 MAPK4P31152 587 aa12.46□□□□□ -0.42
DDR1-232ENST00000418800 CHKAP35790 457 aa12.46□□□□□ -0.42
DDR1-232ENST00000418800 CCNFP41002 786 aa12.46□□□□□ -0.42
DDR1-232ENST00000418800 GPC5P78333 572 aa12.46□□□□□ -0.42
DDR1-232ENST00000418800 KPNB1Q14974 876 aaKnown RBP12.46□□□□□ -0.42
DDR1-232ENST00000418800 COL23A1Q86Y22 540 aaPredicted RBP12.46□□□□□ -0.42
DDR1-232ENST00000418800 ANKMY2Q8IV38 441 aa12.46□□□□□ -0.42
DDR1-232ENST00000418800 MIPOL1Q8TD10 442 aa12.46□□□□□ -0.42
DDR1-232ENST00000418800 ITFG2Q969R8 447 aa12.46□□□□□ -0.42
DDR1-232ENST00000418800 NDNQ99608 321 aa12.46□□□□□ -0.42
DDR1-232ENST00000418800 UBE2OQ9C0C9 1292 aaKnown RBP12.46□□□□□ -0.42
DDR1-232ENST00000418800 GALNT8Q9NY28 637 aa12.46□□□□□ -0.42
DDR1-232ENST00000418800 EMSYQ7Z589 1322 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 PNMA6FA0A0J9YX94 578 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 ARHGEF35A5YM69 484 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 TPBGLP0DKB5 382 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 MARK3P27448 753 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 VHLP40337 213 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 FMO5P49326 533 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 PPP2R5EQ16537 467 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 CBWD6Q4V339 395 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 CBWD3Q5JTY5 395 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 CBWD5Q5RIA9 395 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 DUPD1Q68J44 220 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 PHLDB3Q6NSJ2 640 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 RFWD3Q6PCD5 774 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 FBXO33Q7Z6M2 555 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 ZNF564Q8TBZ8 553 aaPredicted RBP12.45□□□□□ -0.42
DDR1-232ENST00000418800 SLC35C1Q96A29 364 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 RBM41Q96IZ5 413 aaKnown RBP12.45□□□□□ -0.42
DDR1-232ENST00000418800 JMJD4Q9H9V9 463 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 CCNL1Q9UK58 526 aaPredicted RBP12.45□□□□□ -0.42
DDR1-232ENST00000418800 GDF11O95390 407 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 HARSP12081 509 aaKnown RBP12.45□□□□□ -0.42
DDR1-232ENST00000418800 COILP38432 576 aaPredicted RBP12.45□□□□□ -0.42
DDR1-232ENST00000418800 KHDC1Q4VXA5 237 aaKnown RBP12.45□□□□□ -0.42
DDR1-232ENST00000418800 TTC27Q6P3X3 843 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 FRMD5Q7Z6J6 570 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 ANKRD35Q8N283 1001 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 AGGF1Q8N302 714 aaeCLIP12.45□□□□□ -0.425e-7■■■■■ 43.7
DDR1-232ENST00000418800 CCDC124Q96CT7 223 aaKnown RBP12.45□□□□□ -0.42
DDR1-232ENST00000418800 AGPAT1Q99943 283 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 CARD9Q9H257 536 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 C12orf65Q9H3J6 166 aaKnown RBP12.45□□□□□ -0.42
DDR1-232ENST00000418800 SLIT3O75094 1523 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 SYNGAP1Q96PV0 1343 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 RBAK-RBAKDNI3L0D1 243 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 TROVE2P10155 538 aaKnown RBP eCLIP12.45□□□□□ -0.42
DDR1-232ENST00000418800 IRX4P78413 519 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 ARHGAP4P98171 946 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 MCL1Q07820 350 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 DYNC1I2Q13409 638 aaKnown RBP12.45□□□□□ -0.42
DDR1-232ENST00000418800 DHX34Q14147 1143 aaKnown RBP12.45□□□□□ -0.42
DDR1-232ENST00000418800 GIT2Q14161 759 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 MAP7Q14244 749 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 QRICH1Q2TAL8 776 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 SBK1Q52WX2 424 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 DCAF12L1Q5VU92 463 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 NEDD1Q8NHV4 660 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 SMYD3Q9H7B4 428 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 ARHGEF3Q9NR81 526 aa12.45□□□□□ -0.42
DDR1-232ENST00000418800 TYW1Q9NV66 732 aaKnown RBP12.45□□□□□ -0.42
DDR1-232ENST00000418800 HNRNPRO43390 633 aaKnown RBP12.44□□□□□ -0.42
DDR1-232ENST00000418800 ZBED4O75132 1171 aa12.44□□□□□ -0.42
DDR1-232ENST00000418800 STK10O94804 968 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms