RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 NPHP3-ACAD11A0A0J9YXS1 232 aa18.09■□□□□ 0.49
LINC00404-201ENST00000418660 F8W810 466 aa18.09■□□□□ 0.49
LINC00404-201ENST00000418660 STX6O43752 255 aa18.09■□□□□ 0.49
LINC00404-201ENST00000418660 URODP06132 367 aa18.09■□□□□ 0.49
LINC00404-201ENST00000418660 CNPP09543 421 aaKnown RBP18.09■□□□□ 0.49
LINC00404-201ENST00000418660 KARSQ15046 597 aaKnown RBP18.09■□□□□ 0.49
LINC00404-201ENST00000418660 TAS1R1Q7RTX1 841 aa18.09■□□□□ 0.49
LINC00404-201ENST00000418660 RASSF8Q8NHQ8 419 aa18.09■□□□□ 0.49
LINC00404-201ENST00000418660 LRRC15Q8TF66 581 aa18.09■□□□□ 0.49
LINC00404-201ENST00000418660 TARS2Q9BW92 718 aaKnown RBP18.09■□□□□ 0.49
LINC00404-201ENST00000418660 PHF7Q9BWX1 381 aaPredicted RBP18.09■□□□□ 0.49
LINC00404-201ENST00000418660 CCSER1Q9C0I3 900 aa18.09■□□□□ 0.49
LINC00404-201ENST00000418660 CDT1Q9H211 546 aa18.09■□□□□ 0.49
LINC00404-201ENST00000418660 BLOC1S4Q9NUP1 217 aa18.09■□□□□ 0.49
LINC00404-201ENST00000418660 DZANK1Q9NVP4 752 aa18.09■□□□□ 0.49
LINC00404-201ENST00000418660 LARSQ9P2J5 1176 aaKnown RBP18.09■□□□□ 0.49
LINC00404-201ENST00000418660 ODF2LQ9ULJ1 636 aa18.09■□□□□ 0.49
LINC00404-201ENST00000418660 SRPRBQ9Y5M8 271 aaKnown RBP18.09■□□□□ 0.49
LINC00404-201ENST00000418660 TDRD15B5MCY1 1934 aaKnown RBP18.09■□□□□ 0.49
LINC00404-201ENST00000418660 TADA2AO75478 443 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 ALADP13716 330 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 EPCAMP16422 314 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 PLCG1P19174 1290 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 KLRC2P26717 231 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 GRM5P41594 1212 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 GLUD2P49448 558 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 ITIH3Q06033 890 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 STRN3Q13033 797 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 DHX8Q14562 1220 aaKnown RBP18.08■□□□□ 0.48
LINC00404-201ENST00000418660 HSP90AA2PQ14568 343 aaPredicted RBP18.08■□□□□ 0.48
LINC00404-201ENST00000418660 CBX2Q14781 532 aaPredicted RBP18.08■□□□□ 0.48
LINC00404-201ENST00000418660 NAB2Q15742 525 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 ZNF568Q3ZCX4 644 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 KIAA0319Q5VV43 1072 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 FUT10Q6P4F1 479 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 GPBP1Q86WP2 473 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 TMEM161BQ8NDZ6 487 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 RAD54LQ92698 747 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 CCDC94Q9BW85 323 aaPredicted RBP18.08■□□□□ 0.48
LINC00404-201ENST00000418660 APOL5Q9BWW9 433 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 CXCL16Q9H2A7 254 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 ADAM7Q9H2U9 754 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 CHST7Q9NS84 486 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 FBXO2Q9UK22 296 aaPredicted RBP18.08■□□□□ 0.48
LINC00404-201ENST00000418660 ADAM28Q9UKQ2 775 aa18.08■□□□□ 0.48
LINC00404-201ENST00000418660 LOC730098B7Z3J9 87 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 H0YCG3 227 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 C2CD2LO14523 706 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 MAPTP10636 758 aaKnown RBP18.07■□□□□ 0.48
LINC00404-201ENST00000418660 MCF2P10911 925 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 PROZP22891 400 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 MARCKSP29966 332 aaPredicted RBP18.07■□□□□ 0.48
LINC00404-201ENST00000418660 CLCN4P51793 760 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 DSG1Q02413 1049 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 CACNB1Q02641 598 aaPredicted RBP18.07■□□□□ 0.48
LINC00404-201ENST00000418660 MCM6Q14566 821 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 KIAA1841Q6NSI8 718 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 CES5AQ6NT32 575 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 MPZL3Q6UWV2 235 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 GPR65Q8IYL9 337 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 RABGGTAQ92696 567 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 KCNN1Q92952 543 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 EPSTI1Q96J88 318 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 REEP2Q9BRK0 252 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 PAAF1Q9BRP4 392 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 TCHPQ9BT92 498 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 GPR62Q9BZJ7 368 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 RXFP1Q9HBX9 757 aa18.07■□□□□ 0.48
LINC00404-201ENST00000418660 MORC2Q9Y6X9 1032 aaPredicted RBP18.07■□□□□ 0.48
LINC00404-201ENST00000418660 CASTOR2A6NHX0 329 aa18.06■□□□□ 0.48
LINC00404-201ENST00000418660 ABLIM1O14639 778 aa18.06■□□□□ 0.48
LINC00404-201ENST00000418660 BRD1O95696 1058 aa18.06■□□□□ 0.48
LINC00404-201ENST00000418660 DDIT3P35638 169 aa18.06■□□□□ 0.48
LINC00404-201ENST00000418660 YARSP54577 528 aaKnown RBP18.06■□□□□ 0.48
LINC00404-201ENST00000418660 NCKAP1LP55160 1127 aa18.06■□□□□ 0.48
LINC00404-201ENST00000418660 CEBPZQ03701 1054 aaKnown RBP18.06■□□□□ 0.48
LINC00404-201ENST00000418660 USP41Q3LFD5 358 aa18.06■□□□□ 0.48
LINC00404-201ENST00000418660 ZPBP2Q6X784 338 aa18.06■□□□□ 0.48
LINC00404-201ENST00000418660 USP49Q70CQ1 688 aa18.06■□□□□ 0.48
LINC00404-201ENST00000418660 ZBTB33Q86T24 672 aa18.06■□□□□ 0.48
LINC00404-201ENST00000418660 RNF135Q8IUD6 432 aa18.06■□□□□ 0.48
LINC00404-201ENST00000418660 HSCBQ8IWL3 235 aa18.06■□□□□ 0.48
LINC00404-201ENST00000418660 CEP120Q8N960 986 aa18.06■□□□□ 0.48
LINC00404-201ENST00000418660 LARP4BQ92615 738 aaKnown RBP18.06■□□□□ 0.48
LINC00404-201ENST00000418660 TOPORSQ9NS56 1045 aaPredicted RBP18.06■□□□□ 0.48
LINC00404-201ENST00000418660 CACNG4Q9UBN1 327 aa18.06■□□□□ 0.48
LINC00404-201ENST00000418660 CCDC39Q9UFE4 941 aa18.06■□□□□ 0.48
LINC00404-201ENST00000418660 DCXO43602 365 aa18.05■□□□□ 0.48
LINC00404-201ENST00000418660 GPR37L1O60883 481 aa18.05■□□□□ 0.48
LINC00404-201ENST00000418660 TOM1L1O75674 476 aa18.05■□□□□ 0.48
LINC00404-201ENST00000418660 KRT18P05783 430 aaKnown RBP18.05■□□□□ 0.48
LINC00404-201ENST00000418660 ADH1AP07327 375 aa18.05■□□□□ 0.48
LINC00404-201ENST00000418660 SCP2P22307 547 aa18.05■□□□□ 0.48
LINC00404-201ENST00000418660 ZNF131P52739 623 aa18.05■□□□□ 0.48
LINC00404-201ENST00000418660 SLC39A14Q15043 492 aa18.05■□□□□ 0.48
LINC00404-201ENST00000418660 XKR4Q5GH76 650 aa18.05■□□□□ 0.48
LINC00404-201ENST00000418660 SPECC1Q5M775 1068 aa18.05■□□□□ 0.48
LINC00404-201ENST00000418660 RARS2Q5T160 578 aaKnown RBP18.05■□□□□ 0.48
LINC00404-201ENST00000418660 HAUS6Q7Z4H7 955 aa18.05■□□□□ 0.48
LINC00404-201ENST00000418660 C12orf76Q8N812 135 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms