RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 PHF24Q9UPV7 400 aa10.96□□□□□ -0.65
HMGA1P6-201ENST00000418454 ATP8B3O60423 1300 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 LRRIQ3A6PVS8 624 aaPredicted RBP10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 DNM1LO00429 736 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 GPR182O15218 404 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 TREHO43280 583 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 TSPAN1O60635 241 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 LCA5LO95447 670 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 C4BPAP04003 597 aaKnown RBP10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 SERPING1P05155 500 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 CYLC1P35663 651 aaPredicted RBP10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 GRM5P41594 1212 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 PRKCIP41743 596 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 KRT83P78385 493 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 MYL7Q01449 175 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 GCNT1Q02742 428 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 PPP3CAQ08209 521 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 TRIM32Q13049 653 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 ITGA7Q13683 1181 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 SLC9C1Q4G0N8 1177 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 SFMBT2Q5VUG0 894 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 SLC27A1Q6PCB7 646 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 CXCL17Q6UXB2 119 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 RDH13Q8NBN7 331 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 CGRRF1Q99675 332 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 FAM207AQ9NSI2 230 aaPredicted RBP10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 AGPAT5Q9NUQ2 364 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 RAB20Q9NX57 234 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 GCNT4Q9P109 453 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 C2CD2Q9Y426 696 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 TRIM17Q9Y577 477 aa10.95□□□□□ -0.66
HMGA1P6-201ENST00000418454 A0A0U1RQG5 324 aaPredicted RBP10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 MYADML2A6NDP7 307 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 EIF3CLB5ME19 914 aaKnown RBP10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 TISP43B9A030 160 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 PARNO95453 639 aaKnown RBP10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 STAU1O95793 577 aaKnown RBP10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 VTNP04004 478 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 IQCF3P0C7M6 154 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 SKIP12755 728 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 FERP16591 822 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 ARF4P18085 180 aaPredicted RBP10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 SLC9A1P19634 815 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 PAX3P23760 479 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 ATICP31939 592 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 STAT1P42224 750 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 MATR3P43243 847 aaKnown RBP eCLIP10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 MFAP3P55082 362 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 JAM2P57087 298 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 MRPS6P82932 125 aaKnown RBP10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 SNX17Q15036 470 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 ZNF568Q3ZCX4 644 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 CBWD6Q4V339 395 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 CBWD3Q5JTY5 395 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 CBWD5Q5RIA9 395 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 C1orf53Q5VUE5 145 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 PDXDC1Q6P996 788 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 SV2AQ7L0J3 742 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 TTC39CQ8N584 583 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 DNAJC5GQ8N7S2 189 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 CPLX3Q8WVH0 158 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 DNAJB3Q8WWF6 145 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 RSPH1Q8WYR4 309 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 SAAL1Q96ER3 474 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 CALR3Q96L12 384 aaKnown RBP10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 ZNF830Q96NB3 372 aaPredicted RBP10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 SCLT1Q96NL6 688 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 EIF3CQ99613 913 aaKnown RBP10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 LSM14BQ9BX40 385 aaKnown RBP10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 HAPLN2Q9GZV7 340 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 INTS2Q9H0H0 1204 aaKnown RBP10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 IKZF4Q9H2S9 585 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 PDZD7Q9H5P4 517 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 MINDY3Q9H8M7 445 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 RPF1Q9H9Y2 349 aaKnown RBP10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 SIX2Q9NPC8 291 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 LUC7LQ9NQ29 371 aaKnown RBP10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 OGDHLQ9ULD0 1010 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 TRPV2Q9Y5S1 764 aa10.94□□□□□ -0.66
HMGA1P6-201ENST00000418454 KBTBD13C9JR72 458 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 CAPN15O75808 1086 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 IPO7O95373 1038 aaKnown RBP10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 CCDC175P0C221 793 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 FAM163BP0C2L3 166 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 TNNI1P19237 187 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 TBXAS1P24557 533 aaPredicted RBP10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 HOXA11P31270 313 aaPredicted RBP10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 ACOT2P49753 483 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 CDK7P50613 346 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 POLR2FP61218 127 aaKnown RBP10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 DLG4P78352 724 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 LRMPQ12912 555 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 HIC1Q14526 733 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 PTGISQ16647 500 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 SGSM1Q2NKQ1 1148 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 WDR44Q5JSH3 913 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 GDF6Q6KF10 455 aaPredicted RBP10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 WDR59Q6PJI9 974 aa10.93□□□□□ -0.66
HMGA1P6-201ENST00000418454 RRAGAQ7L523 313 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms