RNA–Protein interactions for RNA: ENST00000418110.5

PTPN12-204, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 4

Gene PTPN12, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-204	ENST00000418110	CSRNP2	Q9H175	543 aa		4.91	□□□□□ -1.62
PTPN12-204	ENST00000418110	NELFA	Q9H3P2	528 aa		4.91	□□□□□ -1.62
PTPN12-204	ENST00000418110	METTL14	Q9HCE5	456 aa	Known RBP	4.91	□□□□□ -1.62
PTPN12-204	ENST00000418110	TCF7L1	Q9HCS4	588 aa		4.91	□□□□□ -1.62
PTPN12-204	ENST00000418110	TCEAL9	Q9UHQ7	104 aa		4.91	□□□□□ -1.62
PTPN12-204	ENST00000418110	NOB1	Q9ULX3	412 aa	Known RBP	4.91	□□□□□ -1.62
PTPN12-204	ENST00000418110	ANKRD6	Q9Y2G4	727 aa		4.91	□□□□□ -1.62
PTPN12-204	ENST00000418110	SIK3	Q9Y2K2	1263 aa		4.91	□□□□□ -1.62
PTPN12-204	ENST00000418110	TCAF1	Q9Y4C2	921 aa		4.91	□□□□□ -1.62
PTPN12-204	ENST00000418110	IPP	Q9Y573	584 aa		4.91	□□□□□ -1.62
PTPN12-204	ENST00000418110	WNT10B	O00744	389 aa		4.9	□□□□□ -1.63
PTPN12-204	ENST00000418110	SCGB1D2	O95969	90 aa		4.9	□□□□□ -1.63
PTPN12-204	ENST00000418110	GAST	P01350	101 aa		4.9	□□□□□ -1.63
PTPN12-204	ENST00000418110	MSX2	P35548	267 aa	Predicted RBP	4.9	□□□□□ -1.63
PTPN12-204	ENST00000418110	SREBF1	P36956	1147 aa		4.9	□□□□□ -1.63
PTPN12-204	ENST00000418110	APBA1	Q02410	837 aa		4.9	□□□□□ -1.63
PTPN12-204	ENST00000418110	PRAMEF14	Q5SWL7	426 aa		4.9	□□□□□ -1.63
PTPN12-204	ENST00000418110	TRMT2A	Q8IZ69	625 aa	Known RBP	4.9	□□□□□ -1.63
PTPN12-204	ENST00000418110	OR7D4	Q8NG98	312 aa		4.9	□□□□□ -1.63
PTPN12-204	ENST00000418110	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
PTPN12-204	ENST00000418110	CCHCR1	Q8TD31	782 aa		4.9	□□□□□ -1.63
PTPN12-204	ENST00000418110	KAT5	Q92993	513 aa		4.9	□□□□□ -1.63
PTPN12-204	ENST00000418110	LRGUK	Q96M69	825 aa		4.9	□□□□□ -1.63
PTPN12-204	ENST00000418110	PDCD2L	Q9BRP1	358 aa		4.9	□□□□□ -1.63
PTPN12-204	ENST00000418110	ZNF341	Q9BYN7	854 aa		4.9	□□□□□ -1.63
PTPN12-204	ENST00000418110	BCO1	Q9HAY6	547 aa		4.9	□□□□□ -1.63
PTPN12-204	ENST00000418110	SH3BP1	Q9Y3L3	701 aa		4.9	□□□□□ -1.63
PTPN12-204	ENST00000418110	FAM171A2	A8MVW0	826 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	MUSK	O15146	869 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	HOXA3	O43365	443 aa	Predicted RBP	4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	PRPF3	O43395	683 aa	Known RBP	4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	RAD17	O75943	681 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	ENDOD1	O94919	500 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	PARN	O95453	639 aa	Known RBP	4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	PDC	P20941	246 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	CRHR1	P34998	444 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	WAS	P42768	502 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	GZMK	P49863	264 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	FXR1	P51114	621 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	RRP12	Q5JTH9	1297 aa	Known RBP	4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	SPDYA	Q5MJ70	313 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	FKBP15	Q5T1M5	1219 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	MIGA2	Q7L4E1	593 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	XYLT1	Q86Y38	959 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	FMNL3	Q8IVF7	1028 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	CHPF	Q8IZ52	775 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	D2HGDH	Q8N465	521 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110		Q8TCH9	128 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	HDAC10	Q969S8	669 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	IL17RA	Q96F46	866 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	CEP95	Q96GE4	821 aa		4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	ZNF512	Q96ME7	567 aa	Predicted RBP	4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.89	□□□□□ -1.63
PTPN12-204	ENST00000418110	PATE3	B3GLJ2	98 aa		4.88	□□□□□ -1.63
PTPN12-204	ENST00000418110	TSPAN6	O43657	245 aa		4.88	□□□□□ -1.63
PTPN12-204	ENST00000418110	ZNF623	O75123	536 aa		4.88	□□□□□ -1.63
PTPN12-204	ENST00000418110	POU2F2	P09086	479 aa		4.88	□□□□□ -1.63
PTPN12-204	ENST00000418110	FPR1	P21462	350 aa		4.88	□□□□□ -1.63
PTPN12-204	ENST00000418110	MRPL49	Q13405	166 aa	Known RBP	4.88	□□□□□ -1.63
PTPN12-204	ENST00000418110	FHL2	Q14192	279 aa		4.88	□□□□□ -1.63
PTPN12-204	ENST00000418110	MFSD14B	Q5SR56	506 aa		4.88	□□□□□ -1.63
PTPN12-204	ENST00000418110	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.88	□□□□□ -1.63
PTPN12-204	ENST00000418110	ZGPAT	Q8N5A5	531 aa	Known RBP	4.88	□□□□□ -1.63
PTPN12-204	ENST00000418110	DNER	Q8NFT8	737 aa		4.88	□□□□□ -1.63
PTPN12-204	ENST00000418110	WWC2-AS2	Q96NR7	200 aa		4.88	□□□□□ -1.63
PTPN12-204	ENST00000418110	GTPBP4	Q9BZE4	634 aa	Known RBP	4.88	□□□□□ -1.63
PTPN12-204	ENST00000418110	MSL2	Q9HCI7	577 aa		4.88	□□□□□ -1.63
PTPN12-204	ENST00000418110	CD248	Q9HCU0	757 aa		4.88	□□□□□ -1.63
PTPN12-204	ENST00000418110	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.88	□□□□□ -1.63
PTPN12-204	ENST00000418110	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.88	□□□□□ -1.63
PTPN12-204	ENST00000418110	SLC30A1	Q9Y6M5	507 aa		4.88	□□□□□ -1.63
PTPN12-204	ENST00000418110	RFPL1	O75677	317 aa		4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	AMY1A	P04745	511 aa		4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	VCAM1	P19320	739 aa		4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	COMT	P21964	271 aa		4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	PCSK1	P29120	753 aa		4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	CYP2C19	P33261	490 aa		4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	SELENOP	P49908	381 aa		4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	TARDBP	Q13148	414 aa	Known RBP eCLIP	4.87	□□□□□ -1.63	9e-9	■■■□□ 15.7
PTPN12-204	ENST00000418110	ZNF267	Q14586	743 aa	Predicted RBP	4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	ELAVL1	Q15717	326 aa	Known RBP	4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	GJC2	Q5T442	439 aa	Predicted RBP	4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	IFIT1B	Q5T764	474 aa	Known RBP	4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	ANKS6	Q68DC2	871 aa		4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	USP45	Q70EL2	814 aa		4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	PDZD4	Q76G19	769 aa	Predicted RBP	4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	POLN	Q7Z5Q5	900 aa		4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	WDR75	Q8IWA0	830 aa	Known RBP	4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	MB21D1	Q8N884	522 aa		4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	SLC35B2	Q8TB61	432 aa		4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	CAMKK2	Q96RR4	588 aa		4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	NUP88	Q99567	741 aa	Predicted RBP	4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	MANSC1	Q9H8J5	431 aa		4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	LANCL2	Q9NS86	450 aa		4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	TDP1	Q9NUW8	608 aa		4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	TMEM140	Q9NV12	185 aa		4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	C11orf21	Q9P2W6	132 aa		4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	RUVBL1	Q9Y265	456 aa	Known RBP	4.87	□□□□□ -1.63
PTPN12-204	ENST00000418110	PCDHB1	Q9Y5F3	818 aa		4.87	□□□□□ -1.63

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