RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 AASDHQ4L235 1098 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 EXOSC6Q5RKV6 272 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 HP1BP3Q5SSJ5 553 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 EGFLAMQ63HQ2 1017 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 ZNF385CQ66K41 422 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 OVOS1Q6IE37 1185 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 SYCE2Q6PIF2 218 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 LINC00114Q6XXX2 140 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 PROSER1Q86XN7 944 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 FMR1NBQ8N0W7 255 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 TAB3Q8N5C8 712 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 PPP1R13LQ8WUF5 828 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 LPIN2Q92539 896 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 ITFG2Q969R8 447 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 TM9SF2Q99805 663 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 SCNM1Q9BWG6 230 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 TMPRSS13Q9BYE2 586 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 CABP5Q9NP86 173 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 MED4Q9NPJ6 270 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 SMC4Q9NTJ3 1288 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 DONSONQ9NYP3 566 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 GMIPQ9P107 970 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 WNT16Q9UBV4 365 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 ZNF214Q9UL59 606 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 SRPK3Q9UPE1 567 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 MAPK8IP1Q9UQF2 711 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 B2RBV5 119 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 CHURC1-FNTBB4DL54 471 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 GOLIM4O00461 696 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 PER2O15055 1255 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 TMPRSS2O15393 492 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 ITGB1P05556 798 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 LDHCP07864 332 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 NME1P15531 152 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 NTF4P34130 210 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 RIPPLY3P57055 190 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 HMGN5P82970 282 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 ID3Q02535 119 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 TRDNQ13061 729 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 BECN1Q14457 450 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 FXNQ16595 210 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 LPAL2Q16609 132 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 LCE2AQ5TA79 106 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 CDCP2Q5VXM1 449 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 CES5AQ6NT32 575 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 TATDN1Q6P1N9 297 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 TMEM184AQ6ZMB5 413 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 ZSCAN1Q8NBB4 408 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 DBF4BQ8NFT6 615 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 SPPL3Q8TCT6 385 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 SH3RF3Q8TEJ3 882 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 POF1BQ8WVV4 589 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 ACSF2Q96CM8 615 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 CTAGE1Q96RT6 745 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 NOL10Q9BSC4 688 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 WNT10AQ9GZT5 417 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 CNNM2Q9H8M5 875 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 CYP26B1Q9NR63 512 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 RAD18Q9NS91 495 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 SPATA6Q9NWH7 488 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 CRIM1Q9NZV1 1036 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 CGNQ9P2M7 1197 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 CDH22Q9UJ99 828 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 ADAM30Q9UKF2 790 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 PALD1Q9ULE6 856 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 ADAMTS5Q9UNA0 930 aa6.32□□□□□ -1.4
ECHDC1-206ENST00000417628 ANKRD17O75179 2603 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 PDS5AQ29RF7 1337 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 NBEAQ8NFP9 2946 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 UQCRHLA0A096LP55 91 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 A0A1W2PRG0 241 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 MEGF11A6BM72 1044 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 UPK3BL1B0FP48 263 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 UPK3BL2E5RIL1 263 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 VWA5AO00534 786 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 PDPK1O15530 556 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 GJB6O95452 261 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 PGRP06401 933 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 UQCRHP07919 91 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 MTHFRP42898 656 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 NOVA1P51513 510 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 SNRPNP63162 240 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 HNRNPUQ00839 825 aaKnown RBP eCLIP6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 ITIH3Q06033 890 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 PDE4BQ07343 736 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 HDAC1Q13547 482 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 RASGRF1Q13972 1273 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 MBTPS1Q14703 1052 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 DUOXA2Q1HG44 320 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 CERKLQ49MI3 558 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 BRDTQ58F21 947 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 ZBTB37Q5TC79 503 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 IQSEC1Q6DN90 963 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 SNRNP48Q6IEG0 339 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 XRRA1Q6P2D8 792 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 UNC5AQ6ZN44 842 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 NLRC3Q7RTR2 1065 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 MAPKAPK5Q8IW41 473 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 ANKRD35Q8N283 1001 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 LILRB2Q8N423 598 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms