RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 MRPL17Q9NRX2 175 aaKnown RBP17.17■□□□□ 0.34
ITGB1-204ENST00000417122 BLOC1S4Q9NUP1 217 aa17.17■□□□□ 0.34
ITGB1-204ENST00000417122 LILRB3O75022 631 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 EFEMP2O95967 443 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 URODP06132 367 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 STRN3Q13033 797 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 TUSC3Q13454 348 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 MCM6Q14566 821 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 SPECC1Q5M775 1068 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 TAS1R1Q7RTX1 841 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 GPBP1Q86WP2 473 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 RNF168Q8IYW5 571 aaPredicted RBP17.16■□□□□ 0.34
ITGB1-204ENST00000417122 SUSD6Q92537 303 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 RABGGTAQ92696 567 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 RAD54LQ92698 747 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 EPSTI1Q96J88 318 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 KLHL5Q96PQ7 755 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 TARS2Q9BW92 718 aaKnown RBP17.16■□□□□ 0.34
ITGB1-204ENST00000417122 C1QTNF1Q9BXJ1 281 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 CXCL16Q9H2A7 254 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 PTPRHQ9HD43 1115 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 LARSQ9P2J5 1176 aaKnown RBP17.16■□□□□ 0.34
ITGB1-204ENST00000417122 FBXO2Q9UK22 296 aaPredicted RBP17.16■□□□□ 0.34
ITGB1-204ENST00000417122 ADAM28Q9UKQ2 775 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 ODF2LQ9ULJ1 636 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 SSX2IPQ9Y2D8 614 aa17.16■□□□□ 0.34
ITGB1-204ENST00000417122 SRPRBQ9Y5M8 271 aaKnown RBP17.16■□□□□ 0.34
ITGB1-204ENST00000417122 MYH15Q9Y2K3 1946 aa17.15■□□□□ 0.34
ITGB1-204ENST00000417122 PI4K2BG5E9Z4 385 aa17.15■□□□□ 0.34
ITGB1-204ENST00000417122 C2CD2LO14523 706 aa17.15■□□□□ 0.34
ITGB1-204ENST00000417122 CNPP09543 421 aaKnown RBP17.15■□□□□ 0.34
ITGB1-204ENST00000417122 EPCAMP16422 314 aa17.15■□□□□ 0.34
ITGB1-204ENST00000417122 GLUD2P49448 558 aa17.15■□□□□ 0.34
ITGB1-204ENST00000417122 HSP90AA2PQ14568 343 aaPredicted RBP17.15■□□□□ 0.34
ITGB1-204ENST00000417122 ZNF568Q3ZCX4 644 aa17.15■□□□□ 0.34
ITGB1-204ENST00000417122 TPRNQ4KMQ1 711 aa17.15■□□□□ 0.34
ITGB1-204ENST00000417122 FUT10Q6P4F1 479 aa17.15■□□□□ 0.34
ITGB1-204ENST00000417122 PPFIBP1Q86W92 1011 aa17.15■□□□□ 0.34
ITGB1-204ENST00000417122 TMEM161BQ8NDZ6 487 aa17.15■□□□□ 0.34
ITGB1-204ENST00000417122 SLC22A17Q8WUG5 538 aa17.15■□□□□ 0.34
ITGB1-204ENST00000417122 LARP4BQ92615 738 aaKnown RBP17.15■□□□□ 0.34
ITGB1-204ENST00000417122 USP28Q96RU2 1077 aa17.15■□□□□ 0.34
ITGB1-204ENST00000417122 REEP2Q9BRK0 252 aa17.15■□□□□ 0.34
ITGB1-204ENST00000417122 PHF7Q9BWX1 381 aaPredicted RBP17.15■□□□□ 0.34
ITGB1-204ENST00000417122 CDT1Q9H211 546 aa17.15■□□□□ 0.34
ITGB1-204ENST00000417122 CACNG4Q9UBN1 327 aa17.15■□□□□ 0.34
ITGB1-204ENST00000417122 TRIP11Q15643 1979 aa17.15■□□□□ 0.34
ITGB1-204ENST00000417122 CASTOR2A6NHX0 329 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 H0YCG3 227 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 TADA2AO75478 443 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 KRT18P05783 430 aaKnown RBP17.14■□□□□ 0.33
ITGB1-204ENST00000417122 PROZP22891 400 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 KLRC2P26717 231 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 GRM5P41594 1212 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 DSG1Q02413 1049 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 NAB2Q15742 525 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 KIAA1841Q6NSI8 718 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 MPZL3Q6UWV2 235 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 USP49Q70CQ1 688 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 ZBTB33Q86T24 672 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 CEP120Q8N960 986 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 CLIC6Q96NY7 704 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 PAAF1Q9BRP4 392 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 TCHPQ9BT92 498 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 CCDC94Q9BW85 323 aaPredicted RBP17.14■□□□□ 0.33
ITGB1-204ENST00000417122 GPR62Q9BZJ7 368 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 CHST7Q9NS84 486 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 DZANK1Q9NVP4 752 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 CCDC39Q9UFE4 941 aa17.14■□□□□ 0.33
ITGB1-204ENST00000417122 ABLIM1O14639 778 aa17.13■□□□□ 0.33
ITGB1-204ENST00000417122 FAM13AO94988 1023 aa17.13■□□□□ 0.33
ITGB1-204ENST00000417122 HSP90AA1P07900 732 aaKnown RBP17.13■□□□□ 0.33
ITGB1-204ENST00000417122 MAPTP10636 758 aaKnown RBP17.13■□□□□ 0.33
ITGB1-204ENST00000417122 MCF2P10911 925 aa17.13■□□□□ 0.33
ITGB1-204ENST00000417122 DDIT3P35638 169 aa17.13■□□□□ 0.33
ITGB1-204ENST00000417122 CLCN4P51793 760 aa17.13■□□□□ 0.33
ITGB1-204ENST00000417122 YARSP54577 528 aaKnown RBP17.13■□□□□ 0.33
ITGB1-204ENST00000417122 NCKAP1LP55160 1127 aa17.13■□□□□ 0.33
ITGB1-204ENST00000417122 OSTNP61366 133 aa17.13■□□□□ 0.33
ITGB1-204ENST00000417122 ITIH3Q06033 890 aa17.13■□□□□ 0.33
ITGB1-204ENST00000417122 CBX2Q14781 532 aaPredicted RBP17.13■□□□□ 0.33
ITGB1-204ENST00000417122 SLC39A14Q15043 492 aa17.13■□□□□ 0.33
ITGB1-204ENST00000417122 USP41Q3LFD5 358 aa17.13■□□□□ 0.33
ITGB1-204ENST00000417122 GLRA4Q5JXX5 417 aa17.13■□□□□ 0.33
ITGB1-204ENST00000417122 KIAA0319Q5VV43 1072 aa17.13■□□□□ 0.33
ITGB1-204ENST00000417122 CES5AQ6NT32 575 aa17.13■□□□□ 0.33
ITGB1-204ENST00000417122 MYCT1Q8N699 235 aa17.13■□□□□ 0.33
ITGB1-204ENST00000417122 ZBTB45Q96K62 511 aaPredicted RBP17.13■□□□□ 0.33
ITGB1-204ENST00000417122 ADAM7Q9H2U9 754 aa17.13■□□□□ 0.33
ITGB1-204ENST00000417122 TOPORSQ9NS56 1045 aaPredicted RBP17.13■□□□□ 0.33
ITGB1-204ENST00000417122 MORC2Q9Y6X9 1032 aaPredicted RBP17.13■□□□□ 0.33
ITGB1-204ENST00000417122 NCOR1O75376 2440 aa17.13■□□□□ 0.33
ITGB1-204ENST00000417122 TOM1L1O75674 476 aa17.12■□□□□ 0.33
ITGB1-204ENST00000417122 KIF4AO95239 1232 aa17.12■□□□□ 0.33
ITGB1-204ENST00000417122 BRD1O95696 1058 aa17.12■□□□□ 0.33
ITGB1-204ENST00000417122 HARSP12081 509 aaKnown RBP17.12■□□□□ 0.33
ITGB1-204ENST00000417122 ALADP13716 330 aa17.12■□□□□ 0.33
ITGB1-204ENST00000417122 TXLNAP40222 546 aa17.12■□□□□ 0.33
ITGB1-204ENST00000417122 ZNF131P52739 623 aa17.12■□□□□ 0.33
ITGB1-204ENST00000417122 RARS2Q5T160 578 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms