RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 DCLK2Q8N568 766 aa14.33□□□□□ -0.12
LINC00339-202ENST00000416769 GTF3C6Q969F1 213 aa14.33□□□□□ -0.12
LINC00339-202ENST00000416769 EIF2AK1Q9BQI3 630 aaKnown RBP14.33□□□□□ -0.12
LINC00339-202ENST00000416769 RTP3Q9BQQ7 232 aa14.33□□□□□ -0.12
LINC00339-202ENST00000416769 WNT16Q9UBV4 365 aa14.33□□□□□ -0.12
LINC00339-202ENST00000416769 MED19A0JLT2 244 aaPredicted RBP14.32□□□□□ -0.12
LINC00339-202ENST00000416769 CASTOR2A6NHX0 329 aa14.32□□□□□ -0.12
LINC00339-202ENST00000416769 ANHXE9PGG2 379 aa14.32□□□□□ -0.12
LINC00339-202ENST00000416769 SRFP11831 508 aa14.32□□□□□ -0.12
LINC00339-202ENST00000416769 LAMP2P13473 410 aa14.32□□□□□ -0.12
LINC00339-202ENST00000416769 ARL2P36404 184 aa14.32□□□□□ -0.12
LINC00339-202ENST00000416769 CUL4AQ13619 759 aa14.32□□□□□ -0.12
LINC00339-202ENST00000416769 CPLX2Q6PUV4 134 aaKnown RBP14.32□□□□□ -0.12
LINC00339-202ENST00000416769 PARM1Q6UWI2 310 aa14.32□□□□□ -0.12
LINC00339-202ENST00000416769 GRASPQ7Z6J2 395 aaPredicted RBP14.32□□□□□ -0.12
LINC00339-202ENST00000416769 KIAA2013Q8IYS2 634 aa14.32□□□□□ -0.12
LINC00339-202ENST00000416769 NECAB1Q8N987 351 aa14.32□□□□□ -0.12
LINC00339-202ENST00000416769 KCNG4Q8TDN1 519 aa14.32□□□□□ -0.12
LINC00339-202ENST00000416769 PIGOQ8TEQ8 1089 aa14.32□□□□□ -0.12
LINC00339-202ENST00000416769 FGF14Q92915 247 aa14.32□□□□□ -0.12
LINC00339-202ENST00000416769 TNFRSF25Q93038 417 aa14.32□□□□□ -0.12
LINC00339-202ENST00000416769 LLPHQ9BRT6 129 aaKnown RBP14.32□□□□□ -0.12
LINC00339-202ENST00000416769 POLR3FQ9H1D9 316 aaPredicted RBP14.32□□□□□ -0.12
LINC00339-202ENST00000416769 ZSWIM4Q9H7M6 989 aa14.32□□□□□ -0.12
LINC00339-202ENST00000416769 PIDD1Q9HB75 910 aa14.32□□□□□ -0.12
LINC00339-202ENST00000416769 ARHGEF3Q9NR81 526 aa14.32□□□□□ -0.12
LINC00339-202ENST00000416769 FRYLO94915 3013 aa14.31□□□□□ -0.12
LINC00339-202ENST00000416769 CARNS1A5YM72 827 aa14.31□□□□□ -0.12
LINC00339-202ENST00000416769 USO1O60763 962 aaKnown RBP14.31□□□□□ -0.12
LINC00339-202ENST00000416769 KIF4AO95239 1232 aa14.31□□□□□ -0.12
LINC00339-202ENST00000416769 FDPSP14324 419 aaKnown RBP14.31□□□□□ -0.12
LINC00339-202ENST00000416769 ANP32AP39687 249 aaKnown RBP14.31□□□□□ -0.12
LINC00339-202ENST00000416769 GPC5P78333 572 aa14.31□□□□□ -0.12
LINC00339-202ENST00000416769 GALNT17Q6IS24 598 aa14.31□□□□□ -0.12
LINC00339-202ENST00000416769 POTEHQ6S545 545 aa14.31□□□□□ -0.12
LINC00339-202ENST00000416769 IFNLR1Q8IU57 520 aaPredicted RBP14.31□□□□□ -0.12
LINC00339-202ENST00000416769 CCDC83Q8IWF9 413 aa14.31□□□□□ -0.12
LINC00339-202ENST00000416769 MAML2Q8IZL2 1156 aaPredicted RBP14.31□□□□□ -0.12
LINC00339-202ENST00000416769 TCP11Q8WWU5 503 aa14.31□□□□□ -0.12
LINC00339-202ENST00000416769 BSNDQ8WZ55 320 aa14.31□□□□□ -0.12
LINC00339-202ENST00000416769 PRKD2Q9BZL6 878 aa14.31□□□□□ -0.12
LINC00339-202ENST00000416769 PARP2Q9UGN5 583 aa14.31□□□□□ -0.12
LINC00339-202ENST00000416769 ADAM28Q9UKQ2 775 aa14.31□□□□□ -0.12
LINC00339-202ENST00000416769 MTF2Q9Y483 593 aaPredicted RBP14.31□□□□□ -0.12
LINC00339-202ENST00000416769 MIA3Q5JRA6 1907 aa14.31□□□□□ -0.12
LINC00339-202ENST00000416769 TRIP11Q15643 1979 aa14.31□□□□□ -0.12
LINC00339-202ENST00000416769 PTGESO14684 152 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 CCL16O15467 120 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 MARCH6O60337 910 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 ZMYND10O75800 440 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 CDKL5O76039 1030 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 PAPLNO95428 1278 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 SP9P0CG40 484 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 GCFC2P16383 781 aaKnown RBP14.3□□□□□ -0.12
LINC00339-202ENST00000416769 RFX1P22670 979 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 RARRES1P49788 294 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 ST3GAL1Q11201 340 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 OTUD6AQ7L8S5 288 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 CNNM3Q8NE01 707 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 ITFG1Q8TB96 612 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 STAMQ92783 540 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 INTS4Q96HW7 963 aaKnown RBP14.3□□□□□ -0.12
LINC00339-202ENST00000416769 HSD17B14Q9BPX1 270 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 CLSTN3Q9BQT9 956 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 COLEC11Q9BWP8 271 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 TRIM6Q9C030 488 aaPredicted RBP14.3□□□□□ -0.12
LINC00339-202ENST00000416769 POLD4Q9HCU8 107 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 UBN1Q9NPG3 1134 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 HCFC1R1Q9NWW0 138 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 GIT1Q9Y2X7 761 aa14.3□□□□□ -0.12
LINC00339-202ENST00000416769 TBX3O15119 743 aa14.29□□□□□ -0.12
LINC00339-202ENST00000416769 ASAP2O43150 1006 aa14.29□□□□□ -0.12
LINC00339-202ENST00000416769 DKC1O60832 514 aaKnown RBP eCLIP14.29□□□□□ -0.12
LINC00339-202ENST00000416769 LMNAP02545 664 aaKnown RBP14.29□□□□□ -0.12
LINC00339-202ENST00000416769 CD72P21854 359 aa14.29□□□□□ -0.12
LINC00339-202ENST00000416769 FSHRP23945 695 aa14.29□□□□□ -0.12
LINC00339-202ENST00000416769 AXLP30530 894 aa14.29□□□□□ -0.12
LINC00339-202ENST00000416769 GRIK3Q13003 919 aa14.29□□□□□ -0.12
LINC00339-202ENST00000416769 SNW1Q13573 536 aaKnown RBP14.29□□□□□ -0.12
LINC00339-202ENST00000416769 HSP90AA2PQ14568 343 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-202ENST00000416769 USP41Q3LFD5 358 aa14.29□□□□□ -0.12
LINC00339-202ENST00000416769 DCLRE1AQ6PJP8 1040 aa14.29□□□□□ -0.12
LINC00339-202ENST00000416769 RSPO2Q6UXX9 243 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-202ENST00000416769 CEP57Q86XR8 500 aa14.29□□□□□ -0.12
LINC00339-202ENST00000416769 NSUN7Q8NE18 718 aaKnown RBP14.29□□□□□ -0.12
LINC00339-202ENST00000416769 CCDC51Q96ER9 411 aa14.29□□□□□ -0.12
LINC00339-202ENST00000416769 RHOBTB2Q9BYZ6 727 aa14.29□□□□□ -0.12
LINC00339-202ENST00000416769 TMEM60Q9H2L4 133 aa14.29□□□□□ -0.12
LINC00339-202ENST00000416769 FBXW11Q9UKB1 542 aa14.29□□□□□ -0.12
LINC00339-202ENST00000416769 PPME1Q9Y570 386 aa14.29□□□□□ -0.12
LINC00339-202ENST00000416769 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-202ENST00000416769 STK36Q9NRP7 1315 aa14.29□□□□□ -0.12
LINC00339-202ENST00000416769 TPRP12270 2363 aaKnown RBP14.29□□□□□ -0.12
LINC00339-202ENST00000416769 A0A1B0GUA9 196 aa14.28□□□□□ -0.12
LINC00339-202ENST00000416769 LRRIQ4A6NIV6 560 aa14.28□□□□□ -0.12
LINC00339-202ENST00000416769 NRG2O14511 850 aaPredicted RBP14.28□□□□□ -0.12
LINC00339-202ENST00000416769 TADA2AO75478 443 aa14.28□□□□□ -0.12
LINC00339-202ENST00000416769 TFDP1Q14186 410 aa14.28□□□□□ -0.12
LINC00339-202ENST00000416769 MXD4Q14582 209 aaPredicted RBP14.28□□□□□ -0.12
LINC00339-202ENST00000416769 NAB2Q15742 525 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms