RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 PSMD5Q16401 504 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 Q4G0T1 1027 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 FAM171A1Q5VUB5 890 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 NOTUMQ6P988 496 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 B3GNT9Q6UX72 402 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 Q6ZUG5 572 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 MTSS1LQ765P7 747 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 FERMT3Q86UX7 667 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 NPAS3Q8IXF0 933 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 GPR161Q8N6U8 529 aaKnown RBP10.43□□□□□ -0.74
LINC01238-201ENST00000416204 GSTCDQ8NEC7 633 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 RDM1Q8NG50 284 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 ETNPPLQ8TBG4 499 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 MBOAT7Q96N66 472 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 TRIM6Q9C030 488 aaPredicted RBP10.43□□□□□ -0.74
LINC01238-201ENST00000416204 UBN1Q9NPG3 1134 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.43□□□□□ -0.74
LINC01238-201ENST00000416204 RGL1Q9NZL6 768 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 FNIP2Q9P278 1114 aa10.43□□□□□ -0.74
LINC01238-201ENST00000416204 DNMT3BQ9UBC3 853 aaKnown RBP10.43□□□□□ -0.74
LINC01238-201ENST00000416204 ASPMQ8IZT6 3477 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 A0A087WWV3 80 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 SHISA7A6NL88 538 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 NRG2O14511 850 aaPredicted RBP10.42□□□□□ -0.74
LINC01238-201ENST00000416204 PAPLNO95428 1278 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 ARF4P18085 180 aaPredicted RBP10.42□□□□□ -0.74
LINC01238-201ENST00000416204 HOXC13P31276 330 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 QARSP47897 775 aaKnown RBP10.42□□□□□ -0.74
LINC01238-201ENST00000416204 USP11P51784 963 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 CYP4A11Q02928 519 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 FZD5Q13467 585 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 CTTNQ14247 550 aaKnown RBP10.42□□□□□ -0.74
LINC01238-201ENST00000416204 HSP90AA2PQ14568 343 aaPredicted RBP10.42□□□□□ -0.74
LINC01238-201ENST00000416204 SLC5A9Q2M3M2 681 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 PABPC1LQ4VXU2 614 aaKnown RBP10.42□□□□□ -0.74
LINC01238-201ENST00000416204 XKR9Q5GH70 373 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 RNF20Q5VTR2 975 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 TANGO2Q6ICL3 276 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 ZNF852Q6ZMS4 543 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 CCDC148Q8NFR7 591 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 LNX1Q8TBB1 728 aaPredicted RBP10.42□□□□□ -0.74
LINC01238-201ENST00000416204 ASAP3Q8TDY4 903 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 NELL1Q92832 810 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 CLDN23Q96B33 292 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 JPH2Q9BR39 696 aaPredicted RBP10.42□□□□□ -0.74
LINC01238-201ENST00000416204 TTPALQ9BTX7 342 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 CSRNP2Q9H175 543 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 DHX33Q9H6R0 707 aaKnown RBP10.42□□□□□ -0.74
LINC01238-201ENST00000416204 PRMT8Q9NR22 394 aaPredicted RBP10.42□□□□□ -0.74
LINC01238-201ENST00000416204 DDX25Q9UHL0 483 aaKnown RBP10.42□□□□□ -0.74
LINC01238-201ENST00000416204 VAV3Q9UKW4 847 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 RAB23Q9ULC3 237 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 USP20Q9Y2K6 914 aa10.42□□□□□ -0.74
LINC01238-201ENST00000416204 ZFP37Q9Y6Q3 630 aaPredicted RBP10.42□□□□□ -0.74
LINC01238-201ENST00000416204 SPEGQ15772 3267 aa10.41□□□□□ -0.74
LINC01238-201ENST00000416204 SF3B1O75533 1304 aaKnown RBP eCLIP10.41□□□□□ -0.74
LINC01238-201ENST00000416204 CCDC196A0A1B0GTZ2 297 aa10.41□□□□□ -0.74
LINC01238-201ENST00000416204 ZZEF1O43149 2961 aa10.41□□□□□ -0.74
LINC01238-201ENST00000416204 TBC1D4O60343 1298 aa10.41□□□□□ -0.74
LINC01238-201ENST00000416204 XYLBO75191 536 aa10.41□□□□□ -0.74
LINC01238-201ENST00000416204 CEBPBP17676 345 aa10.41□□□□□ -0.74
LINC01238-201ENST00000416204 PFKPQ01813 784 aa10.41□□□□□ -0.74
LINC01238-201ENST00000416204 MBTD1Q05BQ5 628 aa10.41□□□□□ -0.74
LINC01238-201ENST00000416204 CCDC6Q16204 474 aa10.41□□□□□ -0.74
LINC01238-201ENST00000416204 AMHR2Q16671 573 aa10.41□□□□□ -0.74
LINC01238-201ENST00000416204 INF2Q27J81 1249 aa10.41□□□□□ -0.74
LINC01238-201ENST00000416204 AXDND1Q5T1B0 1012 aaPredicted RBP10.41□□□□□ -0.74
LINC01238-201ENST00000416204 HEATR6Q6AI08 1181 aaKnown RBP10.41□□□□□ -0.74
LINC01238-201ENST00000416204 NCAPH2Q6IBW4 605 aa10.41□□□□□ -0.74
LINC01238-201ENST00000416204 RSPO2Q6UXX9 243 aaPredicted RBP10.41□□□□□ -0.74
LINC01238-201ENST00000416204 CNNM3Q8NE01 707 aa10.41□□□□□ -0.74
LINC01238-201ENST00000416204 DYDC2Q96IM9 177 aa10.41□□□□□ -0.74
LINC01238-201ENST00000416204 AIFM3Q96NN9 605 aa10.41□□□□□ -0.74
LINC01238-201ENST00000416204 LXNQ9BS40 222 aa10.41□□□□□ -0.74
LINC01238-201ENST00000416204 OSBPL6Q9BZF3 934 aa10.41□□□□□ -0.74
LINC01238-201ENST00000416204 GIT1Q9Y2X7 761 aa10.41□□□□□ -0.74
LINC01238-201ENST00000416204 MRPS23Q9Y3D9 190 aaKnown RBP10.41□□□□□ -0.74
LINC01238-201ENST00000416204 CHURC1-FNTBB4DL54 471 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 I3L4J1 428 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 SLC30A4O14863 429 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 HNRNPA1P09651 372 aaKnown RBP eCLIP10.4□□□□□ -0.74
LINC01238-201ENST00000416204 TDGF1P13385 188 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 YWHABP31946 246 aaKnown RBP10.4□□□□□ -0.74
LINC01238-201ENST00000416204 OR1D2P34982 312 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 RFC5P40937 340 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 FNTBP49356 437 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 PTENP60484 403 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 SATB1Q01826 763 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 CREMQ03060 361 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 ADCY1Q08828 1119 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 GRIK3Q13003 919 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 CAPSQ13938 189 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 NTRK3Q16288 839 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 MAEAQ7L5Y9 396 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 NETO1Q8TDF5 533 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 TCEAL4Q96EI5 215 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 JAKMIP1Q96N16 626 aaKnown RBP10.4□□□□□ -0.74
LINC01238-201ENST00000416204 MTRQ99707 1265 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 LARP6Q9BRS8 491 aaKnown RBP10.4□□□□□ -0.74
LINC01238-201ENST00000416204 XPNPEP1Q9NQW7 623 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms