RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 CCDC144BQ3MJ40 725 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 CCDC137Q6PK04 289 aaKnown RBP11.26□□□□□ -0.61
COL12A1-203ENST00000416123 FRMD5Q7Z6J6 570 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 VPS39Q96JC1 886 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 EGFL8Q99944 293 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 USH1CQ9Y6N9 552 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 SYF2O95926 243 aaKnown RBP11.26□□□□□ -0.61
COL12A1-203ENST00000416123 ESRRAP11474 423 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-203ENST00000416123 PDIA2Q13087 525 aaKnown RBP11.26□□□□□ -0.61
COL12A1-203ENST00000416123 NCOA4Q13772 614 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 ALS2CLQ60I27 953 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 TMED8Q6PL24 325 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-203ENST00000416123 USP33Q8TEY7 942 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 NCLNQ969V3 563 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 AGPAT1Q99943 283 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 KATNAL1Q9BW62 490 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 VCPKMTQ9H867 229 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 FBXO28Q9NVF7 368 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 KLK14Q9P0G3 267 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 TFRCP02786 760 aaKnown RBP11.26□□□□□ -0.61
COL12A1-203ENST00000416123 KRT7P08729 469 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 INPP1P49441 399 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 RCAN1P53805 252 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 TMEM259Q4ZIN3 620 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 ZBED8Q8IZ13 594 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 GPRC5AQ8NFJ5 357 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 TTC8Q8TAM2 541 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 MCEEQ96PE7 176 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 BPIFA3Q9BQP9 254 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 DIS3Q9Y2L1 958 aaKnown RBP11.26□□□□□ -0.61
COL12A1-203ENST00000416123 SCP2P22307 547 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 BCAR1P56945 870 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 EMC2Q15006 297 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 CDR2LQ86X02 465 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-203ENST00000416123 SLC7A5P2Q9GIP4 190 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 ZCWPW1Q9H0M4 648 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 MAD2L2Q9UI95 211 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 KIAA1210Q9ULL0 1709 aa11.26□□□□□ -0.61
COL12A1-203ENST00000416123 CD163L1Q9NR16 1453 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 CFAP69A5D8W1 941 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 WEE2P0C1S8 567 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 ARSEP51690 589 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 TPI1P60174 286 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 CCNYL1Q8N7R7 359 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 FAM49BQ9NUQ9 324 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 POLLQ9UGP5 575 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 INO80Q9ULG1 1556 aaPredicted RBP11.25□□□□□ -0.61
COL12A1-203ENST00000416123 KRT14P02533 472 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 CXorf38Q8TB03 319 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 ZNF560Q96MR9 790 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 PNPLA6Q8IY17 1366 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 ANP32DO95626 131 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 CSF1RP07333 972 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 ORC2Q13416 577 aaPredicted RBP11.25□□□□□ -0.61
COL12A1-203ENST00000416123 SNRNP35Q16560 246 aaKnown RBP11.25□□□□□ -0.61
COL12A1-203ENST00000416123 SEZ6Q53EL9 994 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 GNASQ5JWF2 1037 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 IER5Q5VY09 327 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 UBA3Q8TBC4 463 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 WNT8AQ9H1J5 351 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.25□□□□□ -0.61
COL12A1-203ENST00000416123 MYMKA6NI61 221 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 H3BRJ5 948 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 MMEP08473 750 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 FDX1P10109 184 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 EFNA5P52803 228 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 EIF3EP60228 445 aaKnown RBP11.25□□□□□ -0.61
COL12A1-203ENST00000416123 ZNF235Q14590 738 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 PCSK7Q16549 785 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 MGAT5BQ3V5L5 792 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 BEND6Q5SZJ8 279 aaPredicted RBP11.25□□□□□ -0.61
COL12A1-203ENST00000416123 CC2D1AQ6P1N0 951 aaPredicted RBP11.25□□□□□ -0.61
COL12A1-203ENST00000416123 HHIPL2Q6UWX4 724 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 TRIM59Q8IWR1 403 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 TTC13Q8NBP0 860 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 CPSF2Q9P2I0 782 aaKnown RBP11.25□□□□□ -0.61
COL12A1-203ENST00000416123 ATP1A1P05023 1023 aaKnown RBP11.25□□□□□ -0.61
COL12A1-203ENST00000416123 VCPP55072 806 aaKnown RBP11.25□□□□□ -0.61
COL12A1-203ENST00000416123 DGKDQ16760 1214 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 COL23A1Q86Y22 540 aaPredicted RBP11.25□□□□□ -0.61
COL12A1-203ENST00000416123 KLHL29Q96CT2 875 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 CHP1Q99653 195 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 PITPNM3Q9BZ71 974 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 CNOT10Q9H9A5 744 aaKnown RBP11.25□□□□□ -0.61
COL12A1-203ENST00000416123 JMJD4Q9H9V9 463 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 PMS2P54278 862 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 CDK17Q00537 523 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 TFDP2Q14188 446 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 SPARCL1Q14515 664 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 GUF1Q8N442 669 aaKnown RBP11.25□□□□□ -0.61
COL12A1-203ENST00000416123 ATG4CQ96DT6 458 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 PRPF4O43172 522 aaKnown RBP eCLIP11.25□□□□□ -0.61
COL12A1-203ENST00000416123 GRIN3BO60391 1043 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 NPTXRO95502 500 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 MAGOHP61326 146 aaKnown RBP11.25□□□□□ -0.61
COL12A1-203ENST00000416123 PID1Q7Z2X4 250 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 SPATS2Q86XZ4 545 aaKnown RBP11.25□□□□□ -0.61
COL12A1-203ENST00000416123 FAM118BQ9BPY3 351 aa11.25□□□□□ -0.61
COL12A1-203ENST00000416123 PPARGC1AQ9UBK2 798 aaKnown RBP11.25□□□□□ -0.61
COL12A1-203ENST00000416123 DCTN4Q9UJW0 460 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms