RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 HERVK_113Q902F9 699 aa6.49□□□□□ -1.37
CSTF1-202ENST00000415828 SEC14L1Q92503 715 aa6.49□□□□□ -1.37
CSTF1-202ENST00000415828 ATOH1Q92858 354 aaPredicted RBP6.49□□□□□ -1.37
CSTF1-202ENST00000415828 EYA3Q99504 573 aa6.49□□□□□ -1.37
CSTF1-202ENST00000415828 KCNJ15Q99712 375 aa6.49□□□□□ -1.37
CSTF1-202ENST00000415828 PALD1Q9ULE6 856 aa6.49□□□□□ -1.37
CSTF1-202ENST00000415828 RALGAPA2Q2PPJ7 1873 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 FOXD2O60548 495 aaPredicted RBP6.48□□□□□ -1.37
CSTF1-202ENST00000415828 ASGR2P07307 311 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 ATF2P15336 505 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 GRK2P25098 689 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 GRK3P35626 688 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 MC3RP41968 323 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 FOXO4P98177 505 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 MOGSQ13724 837 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 KIZQ2M2Z5 673 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 SUPT20HL1Q3ZLR7 823 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 C2orf27AQ580R0 203 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 STEAP3Q658P3 488 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 MILR1Q7Z6M3 343 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 MTDHQ86UE4 582 aaKnown RBP6.48□□□□□ -1.37
CSTF1-202ENST00000415828 Q8N1Y9 231 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.48□□□□□ -1.37
CSTF1-202ENST00000415828 TP53I13Q8NBR0 393 aaPredicted RBP6.48□□□□□ -1.37
CSTF1-202ENST00000415828 ZSWIM2Q8NEG5 633 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.48□□□□□ -1.372e-7■■□□□ 13
CSTF1-202ENST00000415828 ZKSCAN4Q969J2 545 aaPredicted RBP6.48□□□□□ -1.37
CSTF1-202ENST00000415828 ZFYVE21Q9BQ24 234 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 ALG1Q9BT22 464 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 EPB41L1Q9H4G0 881 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 PIF1Q9H611 641 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 MTCH2Q9Y6C9 303 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 ZNF804BA4D1E1 1349 aa6.48□□□□□ -1.37
CSTF1-202ENST00000415828 CEP295Q9C0D2 2601 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 PTPRSQ13332 1948 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 ATG2AQ2TAZ0 1938 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 COL4A3Q01955 1670 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 PROB1E7EW31 1015 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 H0Y858 1186 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 AQP7O14520 342 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 FFAR3O14843 346 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 IGSF3O75054 1194 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 UFL1O94874 794 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 NCAM1P13591 858 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 IL9P15248 144 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 CCND3P30281 292 aaPredicted RBP6.47□□□□□ -1.37
CSTF1-202ENST00000415828 SLC6A11P48066 632 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 SNAPC2Q13487 334 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 LONRF2Q1L5Z9 754 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.47□□□□□ -1.37
CSTF1-202ENST00000415828 TRIB2Q92519 343 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 PTPRN2Q92932 1015 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 YIPF4Q9BSR8 244 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 TLR9Q9NR96 1032 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 RTEL1Q9NZ71 1219 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 NDOR1Q9UHB4 597 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 COG5Q9UP83 839 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 MAP3K15Q6ZN16 1313 aa6.47□□□□□ -1.37
CSTF1-202ENST00000415828 HGSO14964 777 aaPredicted RBP6.46□□□□□ -1.38
CSTF1-202ENST00000415828 PLA2G1BP04054 148 aaKnown RBP6.46□□□□□ -1.38
CSTF1-202ENST00000415828 SOD2P04179 222 aa6.46□□□□□ -1.38
CSTF1-202ENST00000415828 C6orf222P0C671 652 aaPredicted RBP6.46□□□□□ -1.38
CSTF1-202ENST00000415828 COL6A2P12110 1019 aa6.46□□□□□ -1.38
CSTF1-202ENST00000415828 GABREP78334 506 aa6.46□□□□□ -1.38
CSTF1-202ENST00000415828 MTHFSDQ2M296 383 aaKnown RBP6.46□□□□□ -1.38
CSTF1-202ENST00000415828 ZC3H12BQ5HYM0 836 aaKnown RBP6.46□□□□□ -1.38
CSTF1-202ENST00000415828 MAP3K21Q5TCX8 1036 aa6.46□□□□□ -1.38
CSTF1-202ENST00000415828 KRTAP5-3Q6L8H2 238 aa6.46□□□□□ -1.38
CSTF1-202ENST00000415828 IGSF10Q6WRI0 2623 aa6.46□□□□□ -1.38
CSTF1-202ENST00000415828 MAMDC2Q7Z304 686 aaPredicted RBP6.46□□□□□ -1.38
CSTF1-202ENST00000415828 ANKRD23Q86SG2 305 aa6.46□□□□□ -1.38
CSTF1-202ENST00000415828 ADGRG2Q8IZP9 1017 aa6.46□□□□□ -1.38
CSTF1-202ENST00000415828 ADSSL1Q8N142 457 aa6.46□□□□□ -1.38
CSTF1-202ENST00000415828 PIP4K2CQ8TBX8 421 aa6.46□□□□□ -1.38
CSTF1-202ENST00000415828 PUS7Q96PZ0 661 aaKnown RBP6.46□□□□□ -1.38
CSTF1-202ENST00000415828 RNF38Q9H0F5 515 aa6.46□□□□□ -1.38
CSTF1-202ENST00000415828 LUC7LQ9NQ29 371 aaKnown RBP6.46□□□□□ -1.38
CSTF1-202ENST00000415828 PCDHA8Q9Y5H6 950 aa6.46□□□□□ -1.38
CSTF1-202ENST00000415828 MYO18BQ8IUG5 2567 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 EPOPA6NHQ4 379 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 ERVV-1B6SEH8 477 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 FAM47E-STBD1D6RA91 191 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 KRIT1O00522 736 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 GNAT1P11488 350 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 GUCY1A3Q02108 690 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 TRIM60Q495X7 471 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 ETV3LQ6ZN32 361 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 IL17REQ8NFR9 667 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 FNIP1Q8TF40 1166 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.45□□□□□ -1.38
CSTF1-202ENST00000415828 KISS1RQ969F8 398 aaPredicted RBP6.45□□□□□ -1.38
CSTF1-202ENST00000415828 DDX11Q96FC9 970 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 TEPSINQ96N21 525 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 CDIP1Q9H305 208 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 IPPKQ9H8X2 491 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 VEZTQ9HBM0 779 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 PCDHB4Q9Y5E5 795 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 PCDHA9Q9Y5H5 950 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 PPP2R3BQ9Y5P8 575 aa6.45□□□□□ -1.38
CSTF1-202ENST00000415828 DMXL2Q8TDJ6 3036 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms