RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 NUP43Q8NFH3 380 aa9.34□□□□□ -0.91
TRA2B-204ENST00000414862 KISS1RQ969F8 398 aaPredicted RBP9.34□□□□□ -0.91
TRA2B-204ENST00000414862 TRIM43Q96BQ3 446 aaPredicted RBP9.34□□□□□ -0.91
TRA2B-204ENST00000414862 ASB2Q96Q27 587 aa9.34□□□□□ -0.91
TRA2B-204ENST00000414862 RNF32Q9H0A6 362 aa9.34□□□□□ -0.91
TRA2B-204ENST00000414862 AATFQ9NY61 560 aaKnown RBP eCLIP9.34□□□□□ -0.91
TRA2B-204ENST00000414862 HMG20BQ9P0W2 317 aa9.34□□□□□ -0.91
TRA2B-204ENST00000414862 ACSL6Q9UKU0 697 aa9.34□□□□□ -0.91
TRA2B-204ENST00000414862 PIEZO1Q92508 2521 aa9.34□□□□□ -0.91
TRA2B-204ENST00000414862 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.33□□□□□ -0.92
TRA2B-204ENST00000414862 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.33□□□□□ -0.92
TRA2B-204ENST00000414862 PQBP1O60828 265 aaKnown RBP9.33□□□□□ -0.92
TRA2B-204ENST00000414862 JUNBP17275 347 aaPredicted RBP9.33□□□□□ -0.92
TRA2B-204ENST00000414862 JAG1P78504 1218 aa9.33□□□□□ -0.92
TRA2B-204ENST00000414862 MRPS5P82675 430 aaKnown RBP9.33□□□□□ -0.92
TRA2B-204ENST00000414862 LRRC41Q15345 812 aa9.33□□□□□ -0.92
TRA2B-204ENST00000414862 KCNMB1Q16558 191 aa9.33□□□□□ -0.92
TRA2B-204ENST00000414862 CCDC174Q6PII3 467 aa9.33□□□□□ -0.92
TRA2B-204ENST00000414862 LBX2Q6XYB7 198 aa9.33□□□□□ -0.92
TRA2B-204ENST00000414862 RCBTB1Q8NDN9 531 aa9.33□□□□□ -0.92
TRA2B-204ENST00000414862 TGFBRAP1Q8WUH2 860 aa9.33□□□□□ -0.92
TRA2B-204ENST00000414862 PPM1EQ8WY54 764 aa9.33□□□□□ -0.92
TRA2B-204ENST00000414862 FERMT2Q96AC1 680 aa9.33□□□□□ -0.92
TRA2B-204ENST00000414862 NEUROD6Q96NK8 337 aa9.33□□□□□ -0.92
TRA2B-204ENST00000414862 PALD1Q9ULE6 856 aa9.33□□□□□ -0.92
TRA2B-204ENST00000414862 NPFFR2Q9Y5X5 522 aa9.33□□□□□ -0.92
TRA2B-204ENST00000414862 CHD9Q3L8U1 2897 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 CCDC163A0A0D9SF12 145 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 KIAA0355O15063 1070 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 STRNO43815 780 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 RARBP10826 455 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 TAL1P17542 331 aaPredicted RBP9.32□□□□□ -0.92
TRA2B-204ENST00000414862 CORO7P57737 925 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 MVKQ03426 396 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 TFCP2Q12800 502 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 RAB3GAP1Q15042 981 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 FAM47AQ5JRC9 791 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 AKNAD1Q5T1N1 836 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 CATSPERGQ6ZRH7 1159 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 CCDC129Q6ZRS4 1044 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 RNF180Q86T96 592 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 DCAF4Q8WV16 495 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 SSH1Q8WYL5 1049 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 C1QTNF1Q9BXJ1 281 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 KIAA1683Q9H0B3 1180 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 XPNPEP3Q9NQH7 507 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 TMEM260Q9NX78 707 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 BTBD7Q9P203 1132 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 GULP1Q9UBP9 304 aa9.32□□□□□ -0.92
TRA2B-204ENST00000414862 SAP30BPQ9UHR5 308 aaKnown RBP9.32□□□□□ -0.92
TRA2B-204ENST00000414862 ESYT3A0FGR9 886 aa9.31□□□□□ -0.92
TRA2B-204ENST00000414862 TLDC2A0PJX2 215 aa9.31□□□□□ -0.92
TRA2B-204ENST00000414862 SRGAP3O43295 1099 aa9.31□□□□□ -0.92
TRA2B-204ENST00000414862 GLI1P08151 1106 aa9.31□□□□□ -0.92
TRA2B-204ENST00000414862 UQCRFS1P1P0C7P4 283 aa9.31□□□□□ -0.92
TRA2B-204ENST00000414862 MSL3P1P0C860 447 aa9.31□□□□□ -0.92
TRA2B-204ENST00000414862 LCP1P13796 627 aa9.31□□□□□ -0.92
TRA2B-204ENST00000414862 EPHB4P54760 987 aa9.31□□□□□ -0.92
TRA2B-204ENST00000414862 CYP4F8P98187 520 aa9.31□□□□□ -0.92
TRA2B-204ENST00000414862 FAM168AQ92567 244 aa9.31□□□□□ -0.92
TRA2B-204ENST00000414862 RPAP3Q9H6T3 665 aaPredicted RBP9.31□□□□□ -0.92
TRA2B-204ENST00000414862 CRTAC1Q9NQ79 661 aa9.31□□□□□ -0.92
TRA2B-204ENST00000414862 GPR27Q9NS67 375 aa9.31□□□□□ -0.92
TRA2B-204ENST00000414862 SMC4Q9NTJ3 1288 aa9.31□□□□□ -0.92
TRA2B-204ENST00000414862 YBX2Q9Y2T7 364 aaKnown RBP9.31□□□□□ -0.92
TRA2B-204ENST00000414862 ZNF236Q9UL36 1845 aa9.31□□□□□ -0.92
TRA2B-204ENST00000414862 CHD7Q9P2D1 2997 aa9.3□□□□□ -0.92
TRA2B-204ENST00000414862 ROBO3Q96MS0 1386 aa9.3□□□□□ -0.92
TRA2B-204ENST00000414862 PPP1R11O60927 126 aaPredicted RBP9.3□□□□□ -0.92
TRA2B-204ENST00000414862 C6orf222P0C671 652 aaPredicted RBP9.3□□□□□ -0.92
TRA2B-204ENST00000414862 PNLIPP16233 465 aa9.3□□□□□ -0.92
TRA2B-204ENST00000414862 ITGB8P26012 769 aa9.3□□□□□ -0.92
TRA2B-204ENST00000414862 MCAMP43121 646 aa9.3□□□□□ -0.92
TRA2B-204ENST00000414862 XP32Q5T750 250 aa9.3□□□□□ -0.92
TRA2B-204ENST00000414862 KCNT2Q6UVM3 1135 aa9.3□□□□□ -0.92
TRA2B-204ENST00000414862 RSPO2Q6UXX9 243 aaPredicted RBP9.3□□□□□ -0.92
TRA2B-204ENST00000414862 CERS3Q8IU89 383 aa9.3□□□□□ -0.92
TRA2B-204ENST00000414862 MB21D1Q8N884 522 aa9.3□□□□□ -0.92
TRA2B-204ENST00000414862 SHCBP1Q8NEM2 672 aa9.3□□□□□ -0.92
TRA2B-204ENST00000414862 PHF20Q9BVI0 1012 aa9.3□□□□□ -0.92
TRA2B-204ENST00000414862 MOV10L1Q9BXT6 1211 aaKnown RBP9.3□□□□□ -0.92
TRA2B-204ENST00000414862 SPATC1LQ9H0A9 340 aa9.3□□□□□ -0.92
TRA2B-204ENST00000414862 PRDM12Q9H4Q4 367 aa9.3□□□□□ -0.92
TRA2B-204ENST00000414862 CABP5Q9NP86 173 aa9.3□□□□□ -0.92
TRA2B-204ENST00000414862 NRBP1Q9UHY1 535 aa9.3□□□□□ -0.92
TRA2B-204ENST00000414862 SERPINB13Q9UIV8 391 aa9.3□□□□□ -0.92
TRA2B-204ENST00000414862 TMA7Q9Y2S6 64 aaKnown RBP9.3□□□□□ -0.92
TRA2B-204ENST00000414862 RWDD3Q9Y3V2 267 aa9.3□□□□□ -0.92
TRA2B-204ENST00000414862 TIMM13Q9Y5L4 95 aaPredicted RBP9.3□□□□□ -0.92
TRA2B-204ENST00000414862 RLFQ13129 1914 aa9.29□□□□□ -0.92
TRA2B-204ENST00000414862 SIPA1L1O43166 1804 aa9.29□□□□□ -0.92
TRA2B-204ENST00000414862 A0A1W2PQJ5 194 aa9.29□□□□□ -0.92
TRA2B-204ENST00000414862 TACR1P25103 407 aa9.29□□□□□ -0.92
TRA2B-204ENST00000414862 ARL4AP40617 200 aa9.29□□□□□ -0.92
TRA2B-204ENST00000414862 RPL11P62913 178 aaKnown RBP9.29□□□□□ -0.92
TRA2B-204ENST00000414862 PPIGQ13427 754 aaKnown RBP eCLIP9.29□□□□□ -0.921e-9■□□□□ 10.3
TRA2B-204ENST00000414862 PLS1Q14651 629 aa9.29□□□□□ -0.92
TRA2B-204ENST00000414862 RAB30Q15771 203 aa9.29□□□□□ -0.92
TRA2B-204ENST00000414862 ABCB5Q2M3G0 1257 aa9.29□□□□□ -0.92
TRA2B-204ENST00000414862 ALDH1L2Q3SY69 923 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms