RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 GLUD1P00367 558 aa17.14■□□□□ 0.33
ACTB-202ENST00000414620 SPATA31D3P0C874 917 aa17.14■□□□□ 0.33
ACTB-202ENST00000414620 RPL17P18621 184 aaKnown RBP17.14■□□□□ 0.33
ACTB-202ENST00000414620 HOXD11P31277 338 aaPredicted RBP17.14■□□□□ 0.33
ACTB-202ENST00000414620 DSG1Q02413 1049 aa17.14■□□□□ 0.33
ACTB-202ENST00000414620 ZRSR1Q15695 479 aaKnown RBP17.14■□□□□ 0.33
ACTB-202ENST00000414620 SPATA31D4Q6ZUB0 917 aa17.14■□□□□ 0.33
ACTB-202ENST00000414620 CCDC149Q6ZUS6 474 aa17.14■□□□□ 0.33
ACTB-202ENST00000414620 PALB2Q86YC2 1186 aa17.14■□□□□ 0.33
ACTB-202ENST00000414620 IGSF22Q8N9C0 903 aa17.14■□□□□ 0.33
ACTB-202ENST00000414620 RIN2Q8WYP3 895 aaPredicted RBP17.14■□□□□ 0.33
ACTB-202ENST00000414620 TMX3Q96JJ7 454 aa17.14■□□□□ 0.33
ACTB-202ENST00000414620 RAB34Q9BZG1 259 aa17.14■□□□□ 0.33
ACTB-202ENST00000414620 ADAM28Q9UKQ2 775 aa17.14■□□□□ 0.33
ACTB-202ENST00000414620 MUC6Q6W4X9 2439 aa17.13■□□□□ 0.33
ACTB-202ENST00000414620 CCDC169A6NNP5 214 aa17.13■□□□□ 0.33
ACTB-202ENST00000414620 TADA2AO75478 443 aa17.13■□□□□ 0.33
ACTB-202ENST00000414620 BRD1O95696 1058 aa17.13■□□□□ 0.33
ACTB-202ENST00000414620 PDGFBP01127 241 aaPredicted RBP17.13■□□□□ 0.33
ACTB-202ENST00000414620 GJB2P29033 226 aa17.13■□□□□ 0.33
ACTB-202ENST00000414620 VCPP55072 806 aaKnown RBP17.13■□□□□ 0.33
ACTB-202ENST00000414620 TUSC3Q13454 348 aa17.13■□□□□ 0.33
ACTB-202ENST00000414620 MTMR3Q13615 1198 aa17.13■□□□□ 0.33
ACTB-202ENST00000414620 HSP90AA2PQ14568 343 aaPredicted RBP17.13■□□□□ 0.33
ACTB-202ENST00000414620 GLRA4Q5JXX5 417 aa17.13■□□□□ 0.33
ACTB-202ENST00000414620 IER5LQ5T953 404 aa17.13■□□□□ 0.33
ACTB-202ENST00000414620 NT5DC1Q5TFE4 455 aa17.13■□□□□ 0.33
ACTB-202ENST00000414620 KRT79Q5XKE5 535 aa17.13■□□□□ 0.33
ACTB-202ENST00000414620 PRSS55Q6UWB4 352 aaPredicted RBP17.13■□□□□ 0.33
ACTB-202ENST00000414620 FBXL6Q8N531 539 aa17.13■□□□□ 0.33
ACTB-202ENST00000414620 KIFAP3Q92845 792 aa17.13■□□□□ 0.33
ACTB-202ENST00000414620 RUSC1Q9BVN2 902 aa17.13■□□□□ 0.33
ACTB-202ENST00000414620 RXFP1Q9HBX9 757 aa17.13■□□□□ 0.33
ACTB-202ENST00000414620 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.13■□□□□ 0.33
ACTB-202ENST00000414620 LIMD1Q9UGP4 676 aa17.13■□□□□ 0.33
ACTB-202ENST00000414620 SORCS3Q9UPU3 1222 aa17.13■□□□□ 0.33
ACTB-202ENST00000414620 HIP1RO75146 1068 aa17.12■□□□□ 0.33
ACTB-202ENST00000414620 RFPL2O75678 378 aa17.12■□□□□ 0.33
ACTB-202ENST00000414620 KIF4AO95239 1232 aa17.12■□□□□ 0.33
ACTB-202ENST00000414620 PEX3P56589 373 aa17.12■□□□□ 0.33
ACTB-202ENST00000414620 NHLH1Q02575 133 aa17.12■□□□□ 0.33
ACTB-202ENST00000414620 PDIA5Q14554 519 aa17.12■□□□□ 0.33
ACTB-202ENST00000414620 USP41Q3LFD5 358 aa17.12■□□□□ 0.33
ACTB-202ENST00000414620 ATF7IP2Q5U623 682 aa17.12■□□□□ 0.33
ACTB-202ENST00000414620 DTHD1Q6ZMT9 781 aa17.12■□□□□ 0.33
ACTB-202ENST00000414620 KCNK18Q7Z418 384 aa17.12■□□□□ 0.33
ACTB-202ENST00000414620 ALYREFQ86V81 257 aaKnown RBP17.12■□□□□ 0.33
ACTB-202ENST00000414620 ZDHHC14Q8IZN3 488 aa17.12■□□□□ 0.33
ACTB-202ENST00000414620 PRSS33Q8NF86 280 aa17.12■□□□□ 0.33
ACTB-202ENST00000414620 CHST7Q9NS84 486 aa17.12■□□□□ 0.33
ACTB-202ENST00000414620 KIF3AQ9Y496 699 aa17.12■□□□□ 0.33
ACTB-202ENST00000414620 CCDC195A0A1B0GUA6 201 aa17.11■□□□□ 0.33
ACTB-202ENST00000414620 H3BQV1 296 aa17.11■□□□□ 0.33
ACTB-202ENST00000414620 THP07101 528 aa17.11■□□□□ 0.33
ACTB-202ENST00000414620 DCAF4L1Q3SXM0 396 aa17.11■□□□□ 0.33
ACTB-202ENST00000414620 RTP2Q5QGT7 225 aa17.11■□□□□ 0.33
ACTB-202ENST00000414620 CEP57Q86XR8 500 aa17.11■□□□□ 0.33
ACTB-202ENST00000414620 PLIN2Q99541 437 aa17.11■□□□□ 0.33
ACTB-202ENST00000414620 MMTAG2Q9BU76 263 aaKnown RBP17.11■□□□□ 0.33
ACTB-202ENST00000414620 KCNH6Q9H252 994 aa17.11■□□□□ 0.33
ACTB-202ENST00000414620 DNM3Q9UQ16 869 aa17.11■□□□□ 0.33
ACTB-202ENST00000414620 USTQ9Y2C2 406 aa17.11■□□□□ 0.33
ACTB-202ENST00000414620 STK24Q9Y6E0 443 aa17.11■□□□□ 0.33
ACTB-202ENST00000414620 SF3B1O75533 1304 aaKnown RBP eCLIP17.11■□□□□ 0.333e-7■■□□□ 13.7
ACTB-202ENST00000414620 PHLPP2Q6ZVD8 1323 aa17.11■□□□□ 0.33
ACTB-202ENST00000414620 TRIOO75962 3097 aa17.11■□□□□ 0.33
ACTB-202ENST00000414620 K7ERI5 159 aa17.1■□□□□ 0.33
ACTB-202ENST00000414620 LAD1O00515 517 aa17.1■□□□□ 0.33
ACTB-202ENST00000414620 TGM5O43548 720 aa17.1■□□□□ 0.33
ACTB-202ENST00000414620 PRPHP41219 470 aa17.1■□□□□ 0.33
ACTB-202ENST00000414620 NPTX2P47972 431 aa17.1■□□□□ 0.33
ACTB-202ENST00000414620 EFNA5P52803 228 aa17.1■□□□□ 0.33
ACTB-202ENST00000414620 RAD51AP2Q09MP3 1159 aa17.1■□□□□ 0.33
ACTB-202ENST00000414620 FAM171A1Q5VUB5 890 aa17.1■□□□□ 0.33
ACTB-202ENST00000414620 C15orf39Q6ZRI6 1047 aa17.1■□□□□ 0.33
ACTB-202ENST00000414620 DAW1Q8N136 415 aa17.1■□□□□ 0.33
ACTB-202ENST00000414620 PLCD3Q8N3E9 789 aa17.1■□□□□ 0.33
ACTB-202ENST00000414620 CEP120Q8N960 986 aa17.1■□□□□ 0.33
ACTB-202ENST00000414620 SMG7Q92540 1137 aaKnown RBP17.1■□□□□ 0.33
ACTB-202ENST00000414620 ACSF2Q96CM8 615 aaPredicted RBP17.1■□□□□ 0.33
ACTB-202ENST00000414620 UPF2Q9HAU5 1272 aaKnown RBP17.1■□□□□ 0.33
ACTB-202ENST00000414620 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.1■□□□□ 0.33
ACTB-202ENST00000414620 VWA3AA6NCI4 1184 aa17.09■□□□□ 0.33
ACTB-202ENST00000414620 IGFBP6P24592 240 aaPredicted RBP17.09■□□□□ 0.33
ACTB-202ENST00000414620 OSTNP61366 133 aa17.09■□□□□ 0.33
ACTB-202ENST00000414620 ATP2C1P98194 919 aaPredicted RBP17.09■□□□□ 0.33
ACTB-202ENST00000414620 MAPK7Q13164 816 aa17.09■□□□□ 0.33
ACTB-202ENST00000414620 DMP1Q13316 513 aaPredicted RBP17.09■□□□□ 0.33
ACTB-202ENST00000414620 NAB2Q15742 525 aa17.09■□□□□ 0.33
ACTB-202ENST00000414620 ZNF568Q3ZCX4 644 aa17.09■□□□□ 0.33
ACTB-202ENST00000414620 RILPL1Q5EBL4 403 aa17.09■□□□□ 0.33
ACTB-202ENST00000414620 RINT1Q6NUQ1 792 aa17.09■□□□□ 0.33
ACTB-202ENST00000414620 ELMSAN1Q6PJG2 1045 aa17.09■□□□□ 0.33
ACTB-202ENST00000414620 OTOP3Q7RTS5 596 aa17.09■□□□□ 0.33
ACTB-202ENST00000414620 UBALD2Q8IYN6 164 aa17.09■□□□□ 0.33
ACTB-202ENST00000414620 CMASQ8NFW8 434 aaPredicted RBP17.09■□□□□ 0.33
ACTB-202ENST00000414620 PNMA5Q96PV4 448 aa17.09■□□□□ 0.33
ACTB-202ENST00000414620 CDT1Q9H211 546 aa17.09■□□□□ 0.33
ACTB-202ENST00000414620 PIDD1Q9HB75 910 aa17.09■□□□□ 0.33
ACTB-202ENST00000414620 GOLGA2P5Q9HBQ8 144 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms