RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 TMCO5BA8MYB1 307 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 EEF2P13639 858 aaKnown RBP10.11□□□□□ -0.79
SNHG3-201ENST00000413987 MX2P20592 715 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 RDXP35241 583 aaKnown RBP10.11□□□□□ -0.79
SNHG3-201ENST00000413987 LIMK1P53667 647 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 USP46P62068 366 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 KIF23Q02241 960 aaPredicted RBP10.11□□□□□ -0.79
SNHG3-201ENST00000413987 ORC1Q13415 861 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 ZYXQ15942 572 aaKnown RBP10.11□□□□□ -0.79
SNHG3-201ENST00000413987 ABCB5Q2M3G0 1257 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 PCNX4Q63HM2 1172 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 FAM83AQ86UY5 434 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 TMTC1Q8IUR5 882 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 KLHL23Q8NBE8 558 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 CTAGE1Q96RT6 745 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 NUP88Q99567 741 aaPredicted RBP10.11□□□□□ -0.79
SNHG3-201ENST00000413987 ABCF3Q9NUQ8 709 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 MAD2L2Q9UI95 211 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 CRYL1Q9Y2S2 319 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 SQORQ9Y6N5 450 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 A0A1W2PRG0 241 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 ZBTB39O15060 712 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 CYP11A1P05108 521 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 MMEP08473 750 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 SFTPCP11686 197 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 RAC1P63000 192 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 FUT2Q10981 343 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 NEDD9Q14511 834 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 FILIP1LQ4L180 1135 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 C10orf76Q5T2E6 689 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 SYDE2Q5VT97 1194 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 HEATR6Q6AI08 1181 aaKnown RBP10.11□□□□□ -0.79
SNHG3-201ENST00000413987 BRICD5Q6PL45 260 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 RAD9BQ6WBX8 426 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 MICALCLQ6ZW33 695 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 FOXP4Q8IVH2 680 aaPredicted RBP10.11□□□□□ -0.79
SNHG3-201ENST00000413987 ACER1Q8TDN7 264 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 ARHGEF2Q92974 986 aaKnown RBP10.11□□□□□ -0.79
SNHG3-201ENST00000413987 RADILQ96JH8 1075 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 FAM81BQ96LP2 452 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 RMDN3Q96TC7 470 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 CAPS2Q9BXY5 557 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 PLEKHA4Q9H4M7 779 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 TCP11L1Q9NUJ3 509 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 ZNHIT6Q9NWK9 470 aaKnown RBP10.11□□□□□ -0.79
SNHG3-201ENST00000413987 MTRRQ9UBK8 725 aa10.11□□□□□ -0.79
SNHG3-201ENST00000413987 GOLGA8KD6RF30 607 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 MAP3K13O43283 966 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 CYTH3O43739 400 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 TTLL1O95922 423 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 POLR2BP30876 1174 aaKnown RBP10.1□□□□□ -0.79
SNHG3-201ENST00000413987 ARHGAP25P42331 645 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 LMNB2Q03252 620 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 ICA1Q05084 483 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 CKAP4Q07065 602 aaKnown RBP10.1□□□□□ -0.79
SNHG3-201ENST00000413987 MTF1Q14872 753 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 NT5DC1Q5TFE4 455 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 PDE12Q6L8Q7 609 aaKnown RBP10.1□□□□□ -0.79
SNHG3-201ENST00000413987 KCNV1Q6PIU1 500 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 SHC4Q6S5L8 630 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 TMTC3Q6ZXV5 915 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 KCTD1Q719H9 257 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 CNTD1Q8N815 330 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 BCAS4Q8TDM0 211 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 ASIC4Q96FT7 647 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 ALG1Q9BT22 464 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 VAT1LQ9HCJ6 419 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 TMOD4Q9NZQ9 345 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 KCNJ14Q9UNX9 436 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 C2CD2Q9Y426 696 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 PLIN4Q96Q06 1357 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 GREB1LQ9C091 1923 aaPredicted RBP10.1□□□□□ -0.79
SNHG3-201ENST00000413987 MYH4Q9Y623 1939 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 SSC5DA1L4H1 1573 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 POTECB2RU33 542 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 INO80B-WBP1J3KQ70 363 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 MASP2O00187 686 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 KIF3CO14782 793 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 ADAMTS3O15072 1205 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 CHUKO15111 745 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 EIF3HO15372 352 aaKnown RBP eCLIP10.1□□□□□ -0.79
SNHG3-201ENST00000413987 DDAH1O94760 285 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 FSBPO95073 299 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 DNTTP04053 509 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 CYP17A1P05093 508 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 MARCKSP29966 332 aaPredicted RBP10.1□□□□□ -0.79
SNHG3-201ENST00000413987 SLC16A2P36021 539 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 EIF4A3P38919 411 aaKnown RBP10.1□□□□□ -0.79
SNHG3-201ENST00000413987 AMPD2Q01433 879 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 AKAP17AQ02040 695 aaKnown RBP10.1□□□□□ -0.79
SNHG3-201ENST00000413987 STAT4Q14765 748 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 KIAA1755Q5JYT7 1200 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 FKBP1CQ5VVH2 108 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 SLC6A19Q695T7 634 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 TTBK2Q6IQ55 1244 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 DPY19L2Q6NUT2 758 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 USP51Q70EK9 711 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 ENOSF1Q7L5Y1 443 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 GJD3Q8N144 294 aa10.1□□□□□ -0.79
SNHG3-201ENST00000413987 RUBCNQ92622 972 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms