RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 GRIK3Q13003 919 aa20.68■□□□□ 0.9
TRIM56-202ENST00000412507 ZNF568Q3ZCX4 644 aa20.68■□□□□ 0.9
TRIM56-202ENST00000412507 PTCRAQ6ISU1 281 aaPredicted RBP20.68■□□□□ 0.9
TRIM56-202ENST00000412507 APBB1IPQ7Z5R6 666 aaPredicted RBP20.68■□□□□ 0.9
TRIM56-202ENST00000412507 CEP120Q8N960 986 aa20.68■□□□□ 0.9
TRIM56-202ENST00000412507 AUTS2Q8WXX7 1259 aa20.68■□□□□ 0.9
TRIM56-202ENST00000412507 ZBTB45Q96K62 511 aaPredicted RBP20.68■□□□□ 0.9
TRIM56-202ENST00000412507 NECAB3Q96P71 396 aaPredicted RBP20.68■□□□□ 0.9
TRIM56-202ENST00000412507 UHRF1Q96T88 793 aaPredicted RBP20.68■□□□□ 0.9
TRIM56-202ENST00000412507 CDT1Q9H211 546 aa20.68■□□□□ 0.9
TRIM56-202ENST00000412507 PARVGQ9HBI0 331 aa20.68■□□□□ 0.9
TRIM56-202ENST00000412507 MARCH5Q9NX47 278 aa20.68■□□□□ 0.9
TRIM56-202ENST00000412507 C5orf42Q9H799 3197 aa20.67■□□□□ 0.9
TRIM56-202ENST00000412507 C2orf71A6NGG8 1288 aa20.67■□□□□ 0.9
TRIM56-202ENST00000412507 PTGESO14684 152 aa20.67■□□□□ 0.9
TRIM56-202ENST00000412507 TBCAO75347 108 aaKnown RBP20.67■□□□□ 0.9
TRIM56-202ENST00000412507 CXCL14O95715 111 aa20.67■□□□□ 0.9
TRIM56-202ENST00000412507 IL9P15248 144 aa20.67■□□□□ 0.9
TRIM56-202ENST00000412507 STAT6P42226 847 aa20.67■□□□□ 0.9
TRIM56-202ENST00000412507 CCDC73Q6ZRK6 1079 aa20.67■□□□□ 0.9
TRIM56-202ENST00000412507 DYMQ7RTS9 669 aa20.67■□□□□ 0.9
TRIM56-202ENST00000412507 HAUS6Q7Z4H7 955 aa20.67■□□□□ 0.9
TRIM56-202ENST00000412507 PDILTQ8N807 584 aa20.67■□□□□ 0.9
TRIM56-202ENST00000412507 MRPL43Q8N983 215 aaKnown RBP20.67■□□□□ 0.9
TRIM56-202ENST00000412507 CDCA3Q99618 268 aaPredicted RBP20.67■□□□□ 0.9
TRIM56-202ENST00000412507 TCHPQ9BT92 498 aa20.67■□□□□ 0.9
TRIM56-202ENST00000412507 F8W810 466 aa20.66■□□□□ 0.9
TRIM56-202ENST00000412507 H0YCG3 227 aa20.66■□□□□ 0.9
TRIM56-202ENST00000412507 K7ENM7 598 aa20.66■□□□□ 0.9
TRIM56-202ENST00000412507 ABLIM1O14639 778 aa20.66■□□□□ 0.9
TRIM56-202ENST00000412507 NR1I2O75469 434 aa20.66■□□□□ 0.9
TRIM56-202ENST00000412507 CTSAP10619 480 aa20.66■□□□□ 0.9
TRIM56-202ENST00000412507 HARSP12081 509 aaKnown RBP20.66■□□□□ 0.9
TRIM56-202ENST00000412507 PROZP22891 400 aa20.66■□□□□ 0.9
TRIM56-202ENST00000412507 OSTNP61366 133 aa20.66■□□□□ 0.9
TRIM56-202ENST00000412507 BMS1Q14692 1282 aaKnown RBP20.66■□□□□ 0.9
TRIM56-202ENST00000412507 MPZL3Q6UWV2 235 aa20.66■□□□□ 0.9
TRIM56-202ENST00000412507 SV2BQ7L1I2 683 aa20.66■□□□□ 0.9
TRIM56-202ENST00000412507 VN1R2Q8NFZ6 395 aa20.66■□□□□ 0.9
TRIM56-202ENST00000412507 RABGGTAQ92696 567 aa20.66■□□□□ 0.9
TRIM56-202ENST00000412507 CLEC1BQ9P126 229 aa20.66■□□□□ 0.9
TRIM56-202ENST00000412507 CACNG4Q9UBN1 327 aa20.66■□□□□ 0.9
TRIM56-202ENST00000412507 BARX2Q9UMQ3 279 aaPredicted RBP20.66■□□□□ 0.9
TRIM56-202ENST00000412507 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.65■□□□□ 0.9
TRIM56-202ENST00000412507 GRXCR2A6NFK2 248 aa20.65■□□□□ 0.9
TRIM56-202ENST00000412507 MYMKA6NI61 221 aa20.65■□□□□ 0.9
TRIM56-202ENST00000412507 TRAK2O60296 914 aa20.65■□□□□ 0.9
TRIM56-202ENST00000412507 CUTAO60888 179 aa20.65■□□□□ 0.9
TRIM56-202ENST00000412507 THP07101 528 aa20.65■□□□□ 0.9
TRIM56-202ENST00000412507 MCF2P10911 925 aa20.65■□□□□ 0.9
TRIM56-202ENST00000412507 GRM5P41594 1212 aa20.65■□□□□ 0.9
TRIM56-202ENST00000412507 DNM1Q05193 864 aaKnown RBP20.65■□□□□ 0.9
TRIM56-202ENST00000412507 PUS10Q3MIT2 529 aaKnown RBP20.65■□□□□ 0.9
TRIM56-202ENST00000412507 LLGL2Q6P1M3 1020 aa20.65■□□□□ 0.9
TRIM56-202ENST00000412507 DDX12PQ92771 950 aa20.65■□□□□ 0.9
TRIM56-202ENST00000412507 MSLNLQ96KJ4 702 aa20.65■□□□□ 0.9
TRIM56-202ENST00000412507 CCDC94Q9BW85 323 aaPredicted RBP20.65■□□□□ 0.9
TRIM56-202ENST00000412507 COLEC11Q9BWP8 271 aa20.65■□□□□ 0.9
TRIM56-202ENST00000412507 ANKFY1Q9P2R3 1169 aa20.65■□□□□ 0.9
TRIM56-202ENST00000412507 CD207Q9UJ71 328 aa20.65■□□□□ 0.9
TRIM56-202ENST00000412507 FSD2A1L4K1 749 aa20.64■□□□□ 0.89
TRIM56-202ENST00000412507 TOM1L1O75674 476 aa20.64■□□□□ 0.89
TRIM56-202ENST00000412507 NMT1P30419 496 aaKnown RBP20.64■□□□□ 0.89
TRIM56-202ENST00000412507 TUSC3Q13454 348 aa20.64■□□□□ 0.89
TRIM56-202ENST00000412507 NAB2Q15742 525 aa20.64■□□□□ 0.89
TRIM56-202ENST00000412507 GLRA4Q5JXX5 417 aa20.64■□□□□ 0.89
TRIM56-202ENST00000412507 ATL3Q6DD88 541 aa20.64■□□□□ 0.89
TRIM56-202ENST00000412507 ZPBP2Q6X784 338 aa20.64■□□□□ 0.89
TRIM56-202ENST00000412507 TAS1R1Q7RTX1 841 aa20.64■□□□□ 0.89
TRIM56-202ENST00000412507 FAM178BQ8IXR5 827 aa20.64■□□□□ 0.89
TRIM56-202ENST00000412507 BICD1Q96G01 975 aa20.64■□□□□ 0.89
TRIM56-202ENST00000412507 FIZ1Q96SL8 496 aa20.64■□□□□ 0.89
TRIM56-202ENST00000412507 PAAF1Q9BRP4 392 aa20.64■□□□□ 0.89
TRIM56-202ENST00000412507 TBX20Q9UMR3 447 aa20.64■□□□□ 0.89
TRIM56-202ENST00000412507 ZDHHC9Q9Y397 364 aa20.64■□□□□ 0.89
TRIM56-202ENST00000412507 IRAK3Q9Y616 596 aa20.64■□□□□ 0.89
TRIM56-202ENST00000412507 C2orf16Q68DN1 1984 aa20.63■□□□□ 0.89
TRIM56-202ENST00000412507 CASTOR2A6NHX0 329 aa20.63■□□□□ 0.89
TRIM56-202ENST00000412507 MBTPS2O43462 519 aa20.63■□□□□ 0.89
TRIM56-202ENST00000412507 CLASP2O75122 1294 aaKnown RBP20.63■□□□□ 0.89
TRIM56-202ENST00000412507 BRD1O95696 1058 aa20.63■□□□□ 0.89
TRIM56-202ENST00000412507 SOD2P04179 222 aa20.63■□□□□ 0.89
TRIM56-202ENST00000412507 YARSP54577 528 aaKnown RBP20.63■□□□□ 0.89
TRIM56-202ENST00000412507 KCNC3Q14003 757 aa20.63■□□□□ 0.89
TRIM56-202ENST00000412507 NOLC1Q14978 699 aaKnown RBP eCLIP20.63■□□□□ 0.89
TRIM56-202ENST00000412507 PTPN14Q15678 1187 aa20.63■□□□□ 0.89
TRIM56-202ENST00000412507 AXDND1Q5T1B0 1012 aaPredicted RBP20.63■□□□□ 0.89
TRIM56-202ENST00000412507 SHC4Q6S5L8 630 aa20.63■□□□□ 0.89
TRIM56-202ENST00000412507 KCNG4Q8TDN1 519 aa20.63■□□□□ 0.89
TRIM56-202ENST00000412507 KCNN1Q92952 543 aa20.63■□□□□ 0.89
TRIM56-202ENST00000412507 DNAJC19Q96DA6 116 aa20.63■□□□□ 0.89
TRIM56-202ENST00000412507 HERC2P3Q9BVR0 1158 aa20.63■□□□□ 0.89
TRIM56-202ENST00000412507 STK39Q9UEW8 545 aa20.63■□□□□ 0.89
TRIM56-202ENST00000412507 CFAP45Q9UL16 551 aa20.63■□□□□ 0.89
TRIM56-202ENST00000412507 PCDHA7Q9UN72 937 aa20.63■□□□□ 0.89
TRIM56-202ENST00000412507 CLDN3O15551 220 aa20.62■□□□□ 0.89
TRIM56-202ENST00000412507 EFEMP2O95967 443 aa20.62■□□□□ 0.89
TRIM56-202ENST00000412507 MATR3P43243 847 aaKnown RBP eCLIP20.62■□□□□ 0.89
TRIM56-202ENST00000412507 HSP90AA2PQ14568 343 aaPredicted RBP20.62■□□□□ 0.89
TRIM56-202ENST00000412507 SEZ6Q53EL9 994 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms