RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 SETD1BQ9UPS6 1966 aaKnown RBP3.54□□□□□ -1.84
HMGB3P2-201ENST00000411913 ARHGEF17Q96PE2 2063 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 CCDC163A0A0D9SF12 145 aa3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 CHN2P52757 468 aa3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 NRG3P56975 720 aa3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 OCA2Q04671 838 aa3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 MGAT5Q09328 741 aa3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 SCAPQ12770 1279 aa3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 BMS1Q14692 1282 aaKnown RBP3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 BMT2Q1RMZ1 405 aa3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 KIAA1614Q5VZ46 1190 aa3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 MAPKAPK5Q8IW41 473 aa3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 OR56A1Q8NGH5 318 aa3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 GAB3Q8WWW8 586 aa3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 WASF1Q92558 559 aa3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 RNF31Q96EP0 1072 aa3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 MRFAP1L1Q96HT8 127 aa3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 AIFM2Q9BRQ8 373 aa3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 IL17RBQ9NRM6 502 aa3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 TMA7Q9Y2S6 64 aaKnown RBP3.53□□□□□ -1.84
HMGB3P2-201ENST00000411913 PRAMEF4O60810 478 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 IGFALSP35858 605 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 RASA3Q14644 834 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 UBE3CQ15386 1083 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 TSHZ3Q63HK5 1081 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 METRNLQ641Q3 311 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 ESPNLQ6ZVH7 1005 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 TMEM132CQ8N3T6 1108 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 PDPRQ8NCN5 879 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 ZSWIM2Q8NEG5 633 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 MDM1Q8TC05 714 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 DDB2Q92466 427 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 ZBTB9Q96C00 473 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 PDLIM2Q96JY6 352 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 DEPDC7Q96QD5 511 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 SRPK1Q96SB4 655 aaKnown RBP3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 NEU1Q99519 415 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 FDXACB1Q9BRP7 624 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 SNTG2Q9NY99 539 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 ARPP21Q9UBL0 812 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 DMTF1Q9Y222 760 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 TBX22Q9Y458 520 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 SPO11Q9Y5K1 396 aa3.52□□□□□ -1.85
HMGB3P2-201ENST00000411913 A0A1W2PR48 441 aa3.51□□□□□ -1.85
HMGB3P2-201ENST00000411913 DRGXA6NNA5 263 aa3.51□□□□□ -1.85
HMGB3P2-201ENST00000411913 OPA1O60313 960 aa3.51□□□□□ -1.85
HMGB3P2-201ENST00000411913 SEC24DO94855 1032 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P2-201ENST00000411913 BMP15O95972 392 aa3.51□□□□□ -1.85
HMGB3P2-201ENST00000411913 EZH2Q15910 746 aaKnown RBP3.51□□□□□ -1.85
HMGB3P2-201ENST00000411913 AGAP9Q5VTM2 703 aa3.51□□□□□ -1.85
HMGB3P2-201ENST00000411913 PDZD4Q76G19 769 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P2-201ENST00000411913 PTF1AQ7RTS3 328 aa3.51□□□□□ -1.85
HMGB3P2-201ENST00000411913 REXO4Q9GZR2 422 aaKnown RBP3.51□□□□□ -1.85
HMGB3P2-201ENST00000411913 GALNT9Q9HCQ5 603 aa3.51□□□□□ -1.85
HMGB3P2-201ENST00000411913 B4GALT6Q9UBX8 382 aa3.51□□□□□ -1.85
HMGB3P2-201ENST00000411913 FAM221BA6H8Z2 402 aa3.5□□□□□ -1.85
HMGB3P2-201ENST00000411913 ELL2O00472 640 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P2-201ENST00000411913 ELANEP08246 267 aa3.5□□□□□ -1.85
HMGB3P2-201ENST00000411913 CD40P25942 277 aa3.5□□□□□ -1.85
HMGB3P2-201ENST00000411913 GPR15P49685 360 aa3.5□□□□□ -1.85
HMGB3P2-201ENST00000411913 CCDC178Q5BJE1 867 aa3.5□□□□□ -1.85
HMGB3P2-201ENST00000411913 ATXN7L2Q5T6C5 722 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P2-201ENST00000411913 B3GNTL1Q67FW5 361 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P2-201ENST00000411913 SDE2Q6IQ49 451 aa3.5□□□□□ -1.85
HMGB3P2-201ENST00000411913 UBE2R2Q712K3 238 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P2-201ENST00000411913 JAZF1Q86VZ6 243 aa3.5□□□□□ -1.85
HMGB3P2-201ENST00000411913 GLB1L2Q8IW92 636 aa3.5□□□□□ -1.85
HMGB3P2-201ENST00000411913 RHOT2Q8IXI1 618 aa3.5□□□□□ -1.85
HMGB3P2-201ENST00000411913 PTCD3Q96EY7 689 aaKnown RBP3.5□□□□□ -1.85
HMGB3P2-201ENST00000411913 UROC1Q96N76 676 aa3.5□□□□□ -1.85
HMGB3P2-201ENST00000411913 CPNE5Q9HCH3 593 aa3.5□□□□□ -1.85
HMGB3P2-201ENST00000411913 KLHL11Q9NVR0 708 aa3.5□□□□□ -1.85
HMGB3P2-201ENST00000411913 OXSMQ9NWU1 459 aa3.5□□□□□ -1.85
HMGB3P2-201ENST00000411913 MANSC4A6NHS7 340 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 KCNAB3O43448 404 aa3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 ORC4O43929 436 aa3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 ITGA10O75578 1167 aa3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 ASLP04424 464 aa3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 CELA2AP08217 269 aa3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 LTA4HP09960 611 aaKnown RBP3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 CBSLP0DN79 551 aa3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 GPD1P21695 349 aa3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 CBSP35520 551 aa3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 FLT3P36888 993 aa3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 PROK1P58294 105 aa3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 EXOSC10Q01780 885 aaKnown RBP3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 MED25Q71SY5 747 aa3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 BOD1Q96IK1 185 aa3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 ZSWIM1Q9BR11 485 aa3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 ZMAT4Q9H898 229 aa3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 NCOA5Q9HCD5 579 aaKnown RBP3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 MSRAQ9UJ68 235 aa3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 ZKSCAN5Q9Y2L8 839 aa3.49□□□□□ -1.85
HMGB3P2-201ENST00000411913 A0A1B0GTW7 788 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 CBX4O00257 560 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 ENPP3O14638 875 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 RAPGEF3O95398 923 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 GASTP01350 101 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 IGKV2-30P06310 120 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 PFKMP08237 780 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms