RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 CDSNQ15517 529 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 ZRSR1Q15695 479 aaKnown RBP4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 ZNF585AQ6P3V2 769 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 DPH6Q7L8W6 267 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 GPR155Q7Z3F1 870 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 BRAPQ7Z569 592 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 SPRED1Q7Z699 444 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 FILIP1Q7Z7B0 1213 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 RALYLQ86SE5 291 aaKnown RBP4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 CKAP2LQ8IYA6 745 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 CCAR2Q8N163 923 aaKnown RBP4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 SPC24Q8NBT2 197 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 DNERQ8NFT8 737 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 KCNG4Q8TDN1 519 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 CACTINQ8WUQ7 758 aaKnown RBP4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 ZNF669Q96BR6 464 aaPredicted RBP4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 NEK1Q96PY6 1258 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 TACO1Q9BSH4 297 aaKnown RBP4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 AGXT2Q9BYV1 514 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 KLC2Q9H0B6 622 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 MEGF9Q9H1U4 602 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 DEF6Q9H4E7 631 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 IGSF5Q9NSI5 407 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 CALCOCO1Q9P1Z2 691 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 TSC22D4Q9Y3Q8 395 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 FER1L4A9Z1Z3 1794 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 ARFGEF2Q9Y6D5 1785 aa4.04□□□□□ -1.76
RNU6-55P-201ENST00000411092 ZNF142P52746 1687 aaPredicted RBP4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 SALL1Q9NSC2 1324 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 A0A0D9SFI3 127 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 CCDC69A6NI79 296 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 IKBKBO14920 756 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 AKAP8O43823 692 aaKnown RBP4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 TAF5LO75529 589 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 CNOT4O95628 575 aaKnown RBP4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 MAP4K4O95819 1239 aaPredicted RBP4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 SFPQP23246 707 aaKnown RBP eCLIP4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 U2AF2P26368 475 aaKnown RBP eCLIP4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 EVCP57679 992 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 CCZ1BP86790 482 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 CCZ1P86791 482 aaPredicted RBP4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 TERF2Q15554 542 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 CAMK4Q16566 473 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 MCMDC2Q4G0Z9 681 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 C1orf141Q5JVX7 400 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 FOXB2Q5VYV0 432 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 JAKMIP3Q5VZ66 844 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 ZNF771Q7L3S4 317 aaPredicted RBP4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 MTDHQ86UE4 582 aaKnown RBP4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 SCUBE1Q8IWY4 988 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 CCAR1Q8IX12 1150 aaKnown RBP4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 PALM2Q8IXS6 379 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 ELOA2Q8IYF1 753 aaPredicted RBP4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 C17orf53Q8N3J3 647 aaPredicted RBP4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 NECAB1Q8N987 351 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 JMYQ8N9B5 988 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 ENGASEQ8NFI3 743 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 MRPS27Q92552 414 aaKnown RBP4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 ZNF274Q96GC6 653 aaPredicted RBP4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 AJUBAQ96IF1 538 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 PGBD1Q96JS3 809 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 TIGD1Q96MW7 591 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 CDC6Q99741 560 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 SLC39A2Q9NP94 309 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 GPR108Q9NPR9 543 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 DDX21Q9NR30 783 aaKnown RBP eCLIP4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 HELLSQ9NRZ9 838 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 PFDN2Q9UHV9 154 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 MAP3K2Q9Y2U5 619 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 MSRB2Q9Y3D2 182 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 V9GYY5 206 aaPredicted RBP4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 MYH7P12883 1935 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 C5P01031 1676 aa4.03□□□□□ -1.76
RNU6-55P-201ENST00000411092 RGPD2P0DJD1 1756 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 PKD1L3Q7Z443 1732 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 TRPM3Q9HCF6 1732 aaPredicted RBP4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 TRBV23-1A0A0A0MS06 115 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 CCDC85CA6NKD9 419 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 PATE3B3GLJ2 98 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 H0Y858 1186 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 AQP7O14520 342 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 RNMTO43148 476 aaKnown RBP4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 ZSCAN12O43309 604 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 ADCY3O60266 1144 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 FSHBP01225 129 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 HSP90B1P14625 803 aaKnown RBP4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 CPA1P15085 419 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 H2AFXP16104 143 aaPredicted RBP4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 EIF2S2P20042 333 aaKnown RBP4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 CSF2RBP32927 897 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 LRMPQ12912 555 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 PAK1Q13153 545 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 GPS2Q13227 327 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 TUBB2AQ13885 445 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 RABL6Q3YEC7 729 aaPredicted RBP4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 MTERF2Q49AM1 385 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 FAM209AQ5JX71 171 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 TEX35Q5T0J7 233 aa4.02□□□□□ -1.77
RNU6-55P-201ENST00000411092 BTBD8Q5XKL5 378 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms