RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 ARL4CP56559 192 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 RALGDSQ12967 914 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 SF3B3Q15393 1217 aaKnown RBP11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 NSUN6Q8TEA1 469 aaKnown RBP11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 BRD8Q9H0E9 1235 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 A0A0G2JLW4 131 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 RASA4BC9J798 803 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 RASA4O43374 803 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 HIST1H2AGP0C0S8 130 aaPredicted RBP11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 HIST1H2ADP20671 130 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 ETFBP38117 255 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 RWDD2BP57060 319 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 MRPS25P82663 173 aaKnown RBP11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 KRT39Q6A163 491 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 HIST1H2AHQ96KK5 128 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 HIST1H2AJQ99878 128 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 H2AFJQ9BTM1 129 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 ADNPQ9H2P0 1102 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 MYO3BQ8WXR4 1341 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 KCNN4O15554 427 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 PPP6R2O75170 966 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 NDUFS3O75489 264 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 MCAMP43121 646 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 HSD17B4P51659 736 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 R3HDM1Q15032 1099 aaKnown RBP11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 WDR75Q8IWA0 830 aaKnown RBP11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 MCPH1Q8NEM0 835 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 TUBB6Q9BUF5 446 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 FAM129AQ9BZQ8 928 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 ECT2Q9H8V3 914 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 RRAGDQ9NQL2 400 aaPredicted RBP11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 ANKRD12Q6UB98 2062 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 QRICH2Q9H0J4 1663 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 MDH1BQ5I0G3 518 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 CENPTQ96BT3 561 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 APOL5Q9BWW9 433 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 CNOT8Q9UFF9 292 aaKnown RBP11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 NEDD4P46934 1319 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 TRIM60Q495X7 471 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 C11orf57Q6ZUT1 292 aaPredicted RBP11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 ZNF438Q7Z4V0 828 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 DGKHQ86XP1 1220 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 SPATS2Q86XZ4 545 aaKnown RBP11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 NSUN7Q8NE18 718 aaKnown RBP11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 ARL8AQ96BM9 186 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 PLEKHA5Q9HAU0 1116 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 MLXIPLQ9NP71 852 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 ATP7BP35670 1465 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 LAMC1P11047 1609 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 KRT37O76014 449 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 MZF1P28698 734 aaPredicted RBP11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 SPARCL1Q14515 664 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 KRT77Q7Z794 578 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 ZNF614Q8N883 585 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 BTBD6Q96KE9 485 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 PALMDQ9NP74 551 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 CD274Q9NZQ7 290 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 ARHGEF5Q12774 1597 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 C1orf146Q5VVC0 180 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 IER5Q5VY09 327 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 CHSY1Q86X52 802 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 PPM1NQ8N819 430 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 DIS3LQ8TF46 1054 aaKnown RBP11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 HAUS4Q9H6D7 363 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 MDM2Q00987 491 aaPredicted RBP11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 MAP4K1Q92918 833 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 PABPC5Q96DU9 382 aaKnown RBP11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 L3MBTL3Q96JM7 780 aaPredicted RBP11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 MAGI2Q86UL8 1455 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 CELF2O95319 508 aaKnown RBP11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 HARS2P49590 506 aaKnown RBP11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 DPCR1Q3MIW9 517 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 ITPRIPL1Q6GPH6 555 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 ATPAF2Q8N5M1 289 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 PLEKHA8Q96JA3 519 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 C17orf80Q9BSJ5 609 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 GPR63Q9BZJ6 419 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 SPASTQ9UBP0 616 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 DCTN4Q9UJW0 460 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 PNMA8BQ9ULN7 279 aaPredicted RBP11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 ITIH6Q6UXX5 1313 aa11.85□□□□□ -0.51
PRPF40A-202ENST00000410080 NPC1L1Q9UHC9 1359 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 FGGP02679 453 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 USP33Q8TEY7 942 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 RNF25Q96BH1 459 aaPredicted RBP11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 AHCYL2Q96HN2 611 aaKnown RBP11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 SLC9A2Q9UBY0 812 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 E2F8A0AVK6 867 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 TBXAS1P24557 533 aaPredicted RBP11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 VAMP7P51809 220 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 PTRHD1Q6GMV3 140 aaKnown RBP11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 PADI6Q6TGC4 694 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 MYRIPQ8NFW9 859 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 FBXO18Q8NFZ0 1043 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 ASAP3Q8TDY4 903 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 ELMO2Q96JJ3 720 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 BCL2L14Q9BZR8 327 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 KLHL11Q9NVR0 708 aa11.84□□□□□ -0.51
PRPF40A-202ENST00000410080 HACL1Q9UJ83 578 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms