RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 ZNF165P49910 485 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 WDR5P61964 334 aaKnown RBP16.58■□□□□ 0.24
LSM5-207ENST00000410044 ENPEPQ07075 957 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 NCAPHQ15003 741 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 ALKAL1Q6UXT8 129 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.58■□□□□ 0.241e-10■■■□□ 17.1
LSM5-207ENST00000410044 THNSL1Q8IYQ7 743 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 CSGALNACT2Q8N6G5 542 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 CEP120Q8N960 986 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 ZSWIM2Q8NEG5 633 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 NOC3LQ8WTT2 800 aaKnown RBP16.58■□□□□ 0.24
LSM5-207ENST00000410044 TOP1MTQ969P6 601 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 BORCS6Q96GS4 357 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 MFSD14AQ96MC6 490 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 ACAP3Q96P50 834 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 CCDC94Q9BW85 323 aaPredicted RBP16.58■□□□□ 0.24
LSM5-207ENST00000410044 SRRTQ9BXP5 876 aaKnown RBP16.58■□□□□ 0.24
LSM5-207ENST00000410044 PLEKHA5Q9HAU0 1116 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 SNTG2Q9NY99 539 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 PCDH10Q9P2E7 1040 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 GIT1Q9Y2X7 761 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 TRIP11Q15643 1979 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 ZNF233A6NK53 670 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 H0YGN5 161 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 EXOC3O60645 756 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 AKAP3O75969 853 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 AMHP03971 560 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 ITGA4P13612 1032 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 PSMC2P35998 433 aaKnown RBP16.57■□□□□ 0.24
LSM5-207ENST00000410044 TNFSF9P41273 254 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 CASP4P49662 377 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 ACOT2P49753 483 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 CYP2J2P51589 502 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 MARSP56192 900 aaKnown RBP16.57■□□□□ 0.24
LSM5-207ENST00000410044 MLLT1Q03111 559 aaPredicted RBP16.57■□□□□ 0.24
LSM5-207ENST00000410044 IQCB1Q15051 598 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 SLC10A6Q3KNW5 377 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 AGMOQ6ZNB7 445 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 OTOP2Q7RTS6 562 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 NPAS4Q8IUM7 802 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 CD302Q8IX05 232 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 TMEM192Q8IY95 271 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 PHOSPHO2Q8TCD6 241 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 RSPH1Q8WYR4 309 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 SAAL1Q96ER3 474 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 TSPAN18Q96SJ8 248 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 FAM213AQ9BRX8 229 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 RNF39Q9H2S5 420 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 TSPY26PQ9H489 355 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 NXF3Q9H4D5 531 aaKnown RBP16.57■□□□□ 0.24
LSM5-207ENST00000410044 HES2Q9Y543 173 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 PCDHB7Q9Y5E2 793 aa16.57■□□□□ 0.24
LSM5-207ENST00000410044 ANK1P16157 1881 aa16.56■□□□□ 0.24
LSM5-207ENST00000410044 TTC26A0AVF1 554 aa16.56■□□□□ 0.24
LSM5-207ENST00000410044 GOLGA8IPA6NC78 632 aa16.56■□□□□ 0.24
LSM5-207ENST00000410044 GOLGA8JA6NMD2 632 aa16.56■□□□□ 0.24
LSM5-207ENST00000410044 SMTNL1A8MU46 457 aa16.56■□□□□ 0.24
LSM5-207ENST00000410044 SLC16A3O15427 465 aaKnown RBP16.56■□□□□ 0.24
LSM5-207ENST00000410044 MEFVO15553 781 aaPredicted RBP16.56■□□□□ 0.24
LSM5-207ENST00000410044 GNA14O95837 355 aa16.56■□□□□ 0.24
LSM5-207ENST00000410044 MYL5Q02045 173 aa16.56■□□□□ 0.24
LSM5-207ENST00000410044 SURF1Q15526 300 aa16.56■□□□□ 0.24
LSM5-207ENST00000410044 ENOX2Q16206 610 aaKnown RBP16.56■□□□□ 0.24
LSM5-207ENST00000410044 SNRNP35Q16560 246 aaKnown RBP16.56■□□□□ 0.24
LSM5-207ENST00000410044 SEZ6Q53EL9 994 aa16.56■□□□□ 0.24
LSM5-207ENST00000410044 ZBTB41Q5SVQ8 909 aa16.56■□□□□ 0.24
LSM5-207ENST00000410044 IRF2BP1Q8IU81 584 aa16.56■□□□□ 0.24
LSM5-207ENST00000410044 CBWD2Q8IUF1 395 aa16.56■□□□□ 0.24
LSM5-207ENST00000410044 BRSK2Q8IWQ3 736 aa16.56■□□□□ 0.24
LSM5-207ENST00000410044 THAP9Q9H5L6 903 aa16.56■□□□□ 0.24
LSM5-207ENST00000410044 ASB7Q9H672 318 aa16.56■□□□□ 0.24
LSM5-207ENST00000410044 RPF1Q9H9Y2 349 aaKnown RBP16.56■□□□□ 0.24
LSM5-207ENST00000410044 RNF19AQ9NV58 838 aa16.56■□□□□ 0.24
LSM5-207ENST00000410044 FRMD4BQ9Y2L6 1034 aa16.56■□□□□ 0.24
LSM5-207ENST00000410044 PTPRSQ13332 1948 aa16.55■□□□□ 0.24
LSM5-207ENST00000410044 HOXA2O43364 376 aa16.55■□□□□ 0.24
LSM5-207ENST00000410044 OFD1O75665 1012 aa16.55■□□□□ 0.24
LSM5-207ENST00000410044 CAPN15O75808 1086 aa16.55■□□□□ 0.24
LSM5-207ENST00000410044 RECQL4O94761 1208 aa16.55■□□□□ 0.24
LSM5-207ENST00000410044 HARSP12081 509 aaKnown RBP16.55■□□□□ 0.24
LSM5-207ENST00000410044 YARSP54577 528 aaKnown RBP16.55■□□□□ 0.24
LSM5-207ENST00000410044 CEP135Q66GS9 1140 aa16.55■□□□□ 0.24
LSM5-207ENST00000410044 FRMD5Q7Z6J6 570 aa16.55■□□□□ 0.24
LSM5-207ENST00000410044 DHX40Q8IX18 779 aaKnown RBP16.55■□□□□ 0.24
LSM5-207ENST00000410044 FAM200AQ8TCP9 573 aa16.55■□□□□ 0.24
LSM5-207ENST00000410044 TMC2Q8TDI7 906 aa16.55■□□□□ 0.24
LSM5-207ENST00000410044 MTIF3Q9H2K0 278 aaKnown RBP16.55■□□□□ 0.24
LSM5-207ENST00000410044 CBX8Q9HC52 389 aa16.55■□□□□ 0.24
LSM5-207ENST00000410044 METTL14Q9HCE5 456 aaKnown RBP16.55■□□□□ 0.24
LSM5-207ENST00000410044 TOPORSQ9NS56 1045 aaPredicted RBP16.55■□□□□ 0.24
LSM5-207ENST00000410044 PARP2Q9UGN5 583 aa16.55■□□□□ 0.24
LSM5-207ENST00000410044 NFE2L3Q9Y4A8 694 aa16.55■□□□□ 0.24
LSM5-207ENST00000410044 RALGAPA2Q2PPJ7 1873 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 MEIS3P2A8K0S8 358 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 DGKIO75912 1065 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 IL18RAPO95256 599 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 EPB41P11171 864 aaKnown RBP16.54■□□□□ 0.24
LSM5-207ENST00000410044 KCNE1P15382 129 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 AKAP5P24588 427 aa16.54■□□□□ 0.24
LSM5-207ENST00000410044 KCNJ6P48051 423 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms